RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 F2RL2O00254 374 aa12.5□□□□□ -0.41
HDAC6-236ENST00000498808 CLIC3O95833 236 aa12.5□□□□□ -0.41
HDAC6-236ENST00000498808 ANXA2P07355 339 aaKnown RBP12.5□□□□□ -0.41
HDAC6-236ENST00000498808 GLRA1P23415 457 aa12.5□□□□□ -0.41
HDAC6-236ENST00000498808 RPL31P62899 125 aaKnown RBP12.5□□□□□ -0.41
HDAC6-236ENST00000498808 TAF13Q15543 124 aa12.5□□□□□ -0.41
HDAC6-236ENST00000498808 FAM76BQ5HYJ3 339 aa12.5□□□□□ -0.41
HDAC6-236ENST00000498808 SLC35F1Q5T1Q4 408 aa12.5□□□□□ -0.41
HDAC6-236ENST00000498808 C10orf99Q6UWK7 81 aa12.5□□□□□ -0.41
HDAC6-236ENST00000498808 ETV3LQ6ZN32 361 aa12.5□□□□□ -0.41
HDAC6-236ENST00000498808 PRSS45Q7RTY3 260 aa12.5□□□□□ -0.41
HDAC6-236ENST00000498808 MRPL41Q8IXM3 137 aaKnown RBP12.5□□□□□ -0.41
HDAC6-236ENST00000498808 HPSE2Q8WWQ2 592 aa12.5□□□□□ -0.41
HDAC6-236ENST00000498808 OR5P3Q8WZ94 311 aa12.5□□□□□ -0.41
HDAC6-236ENST00000498808 FOXRED1Q96CU9 486 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-236ENST00000498808 SDSLQ96GA7 329 aa12.5□□□□□ -0.41
HDAC6-236ENST00000498808 FUZQ9BT04 418 aa12.5□□□□□ -0.41
HDAC6-236ENST00000498808 SP140LQ9H930 580 aa12.5□□□□□ -0.41
HDAC6-236ENST00000498808 CMTM6Q9NX76 183 aa12.5□□□□□ -0.41
HDAC6-236ENST00000498808 ZNF319Q9P2F9 582 aa12.5□□□□□ -0.41
HDAC6-236ENST00000498808 TBL2Q9Y4P3 447 aaKnown RBP12.5□□□□□ -0.41
HDAC6-236ENST00000498808 ZNF850A8MQ14 1090 aa12.49□□□□□ -0.41
HDAC6-236ENST00000498808 ZNF878C9JN71 531 aa12.49□□□□□ -0.41
HDAC6-236ENST00000498808 CXCR6O00574 342 aa12.49□□□□□ -0.41
HDAC6-236ENST00000498808 SERPINA1P01009 418 aa12.49□□□□□ -0.41
HDAC6-236ENST00000498808 SPARCP09486 303 aa12.49□□□□□ -0.41
HDAC6-236ENST00000498808 CX3CR1P49238 355 aa12.49□□□□□ -0.41
HDAC6-236ENST00000498808 DYNLT3P51808 116 aa12.49□□□□□ -0.41
HDAC6-236ENST00000498808 CAPZA1P52907 286 aa12.49□□□□□ -0.41
HDAC6-236ENST00000498808 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.49□□□□□ -0.41
HDAC6-236ENST00000498808 PRDX4Q13162 271 aa12.49□□□□□ -0.41
HDAC6-236ENST00000498808 ZNF273Q14593 569 aa12.49□□□□□ -0.41
HDAC6-236ENST00000498808 KLHL22Q53GT1 634 aa12.49□□□□□ -0.41
HDAC6-236ENST00000498808 CPLX4Q7Z7G2 160 aa12.49□□□□□ -0.41
HDAC6-236ENST00000498808 CENPVQ7Z7K6 275 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-236ENST00000498808 CSNK2A3Q8NEV1 391 aa12.49□□□□□ -0.41
HDAC6-236ENST00000498808 PROKR2Q8NFJ6 384 aa12.49□□□□□ -0.41
HDAC6-236ENST00000498808 OR51L1Q8NGJ5 315 aa12.49□□□□□ -0.41
HDAC6-236ENST00000498808 MALSU1Q96EH3 234 aa12.49□□□□□ -0.41
HDAC6-236ENST00000498808 YY1AP1Q9H869 796 aa12.49□□□□□ -0.41
HDAC6-236ENST00000498808 KRCC1Q9NPI7 259 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-236ENST00000498808 USE1Q9NZ43 259 aa12.49□□□□□ -0.41
HDAC6-236ENST00000498808 NDUFAF4Q9P032 175 aa12.49□□□□□ -0.41
HDAC6-236ENST00000498808 MPC1Q9Y5U8 109 aa12.49□□□□□ -0.41
HDAC6-236ENST00000498808 A0A1W2PPH5 198 aa12.48□□□□□ -0.41
HDAC6-236ENST00000498808 BBIP1A8MTZ0 92 aa12.48□□□□□ -0.41
HDAC6-236ENST00000498808 ARG1P05089 322 aa12.48□□□□□ -0.41
HDAC6-236ENST00000498808 ACKR3P25106 362 aa12.48□□□□□ -0.41
HDAC6-236ENST00000498808 LMO1P25800 156 aa12.48□□□□□ -0.41
HDAC6-236ENST00000498808 GFOD2Q3B7J2 385 aa12.48□□□□□ -0.41
HDAC6-236ENST00000498808 KHDC1LQ5JSQ8 128 aa12.48□□□□□ -0.41
HDAC6-236ENST00000498808 METTL21CQ5VZV1 264 aa12.48□□□□□ -0.41
HDAC6-236ENST00000498808 KCTD8Q6ZWB6 473 aa12.48□□□□□ -0.41
HDAC6-236ENST00000498808 FAM57BQ71RH2 274 aa12.48□□□□□ -0.41
HDAC6-236ENST00000498808 OR4M1Q8NGD0 313 aa12.48□□□□□ -0.41
HDAC6-236ENST00000498808 OR52J3Q8NH60 311 aa12.48□□□□□ -0.41
HDAC6-236ENST00000498808 RNF170Q96K19 258 aa12.48□□□□□ -0.41
HDAC6-236ENST00000498808 DHRS1Q96LJ7 313 aa12.48□□□□□ -0.41
HDAC6-236ENST00000498808 LYSTQ99698 3801 aa12.48□□□□□ -0.41
HDAC6-236ENST00000498808 KRTAP17-1Q9BYP8 105 aa12.48□□□□□ -0.41
HDAC6-236ENST00000498808 A0A0G2JND7 137 aa12.47□□□□□ -0.41
HDAC6-236ENST00000498808 H0YHG0 523 aa12.47□□□□□ -0.41
HDAC6-236ENST00000498808 IDH3BO43837 385 aa12.47□□□□□ -0.41
HDAC6-236ENST00000498808 DIRAS1O95057 198 aa12.47□□□□□ -0.41
HDAC6-236ENST00000498808 RHCEP18577 417 aa12.47□□□□□ -0.41
HDAC6-236ENST00000498808 CFL1P23528 166 aaKnown RBP12.47□□□□□ -0.41
HDAC6-236ENST00000498808 ENTPD1P49961 510 aa12.47□□□□□ -0.41
HDAC6-236ENST00000498808 DLX6P56179 175 aa12.47□□□□□ -0.41
HDAC6-236ENST00000498808 ZNF121P58317 390 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-236ENST00000498808 GRB2P62993 217 aaKnown RBP12.47□□□□□ -0.41
HDAC6-236ENST00000498808 DMRTC1Q5HYR2 192 aa12.47□□□□□ -0.41
HDAC6-236ENST00000498808 ZNF626Q68DY1 528 aa12.47□□□□□ -0.41
HDAC6-236ENST00000498808 THAP5Q7Z6K1 395 aa12.47□□□□□ -0.41
HDAC6-236ENST00000498808 CD177Q8N6Q3 437 aa12.47□□□□□ -0.41
HDAC6-236ENST00000498808 OR4X2Q8NGF9 303 aa12.47□□□□□ -0.41
HDAC6-236ENST00000498808 MUC7Q8TAX7 377 aa12.47□□□□□ -0.41
HDAC6-236ENST00000498808 GID8Q9NWU2 228 aa12.47□□□□□ -0.41
HDAC6-236ENST00000498808 LSM4Q9Y4Z0 139 aaKnown RBP12.47□□□□□ -0.41
HDAC6-236ENST00000498808 hCG_1809904A0A1W2PP81 198 aa12.46□□□□□ -0.41
HDAC6-236ENST00000498808 A0A1W2PPE2 198 aa12.46□□□□□ -0.41
HDAC6-236ENST00000498808 A0A1W2PR64 198 aa12.46□□□□□ -0.41
HDAC6-236ENST00000498808 A0A1W2PRV1 198 aa12.46□□□□□ -0.41
HDAC6-236ENST00000498808 DHRS12A0PJE2 317 aa12.46□□□□□ -0.41
HDAC6-236ENST00000498808 FAM90A22PA8MWA6 464 aa12.46□□□□□ -0.41
HDAC6-236ENST00000498808 MTRF1O75570 445 aaKnown RBP12.46□□□□□ -0.41
HDAC6-236ENST00000498808 CST4P01036 141 aa12.46□□□□□ -0.41
HDAC6-236ENST00000498808 LIPEQ05469 1076 aa12.46□□□□□ -0.41
HDAC6-236ENST00000498808 KLF10Q13118 480 aa12.46□□□□□ -0.41
HDAC6-236ENST00000498808 SNCBQ16143 134 aa12.46□□□□□ -0.41
HDAC6-236ENST00000498808 SLC15A3Q8IY34 581 aa12.46□□□□□ -0.41
HDAC6-236ENST00000498808 FTMTQ8N4E7 242 aa12.46□□□□□ -0.41
HDAC6-236ENST00000498808 ZNF511Q8NB15 262 aa12.46□□□□□ -0.41
HDAC6-236ENST00000498808 OR52H1Q8NGJ2 320 aa12.46□□□□□ -0.41
HDAC6-236ENST00000498808 OR2T4Q8NH00 348 aa12.46□□□□□ -0.41
HDAC6-236ENST00000498808 OR2T27Q8NH04 317 aa12.46□□□□□ -0.41
HDAC6-236ENST00000498808 DYDC1Q8WWB3 177 aa12.46□□□□□ -0.41
HDAC6-236ENST00000498808 PIGCQ92535 297 aa12.46□□□□□ -0.41
HDAC6-236ENST00000498808 LYZL4Q96KX0 146 aa12.46□□□□□ -0.41
HDAC6-236ENST00000498808 ASCL2Q99929 193 aa12.46□□□□□ -0.41
HDAC6-236ENST00000498808 DNAJC27Q9NZQ0 273 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms