RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 WNT10AQ9GZT5 417 aa11.26□□□□□ -0.61
CCDC58-207ENST00000498466 OR10A2Q9H208 303 aa11.26□□□□□ -0.61
CCDC58-207ENST00000498466 ABCB10Q9NRK6 738 aa11.26□□□□□ -0.61
CCDC58-207ENST00000498466 C19orf12Q9NSK7 152 aa11.26□□□□□ -0.61
CCDC58-207ENST00000498466 DNAJC27Q9NZQ0 273 aa11.26□□□□□ -0.61
CCDC58-207ENST00000498466 MPC1Q9Y5U8 109 aa11.26□□□□□ -0.61
CCDC58-207ENST00000498466 IGKV1D-17A0A075B6S4 117 aa11.25□□□□□ -0.61
CCDC58-207ENST00000498466 DHRS12A0PJE2 317 aa11.25□□□□□ -0.61
CCDC58-207ENST00000498466 ZNF850A8MQ14 1090 aa11.25□□□□□ -0.61
CCDC58-207ENST00000498466 VGLL3A8MV65 326 aa11.25□□□□□ -0.61
CCDC58-207ENST00000498466 PF4P02776 101 aa11.25□□□□□ -0.61
CCDC58-207ENST00000498466 PSG2P11465 335 aa11.25□□□□□ -0.61
CCDC58-207ENST00000498466 IFNGR2P38484 337 aa11.25□□□□□ -0.61
CCDC58-207ENST00000498466 VDAC2P45880 294 aaPredicted RBP11.25□□□□□ -0.61
CCDC58-207ENST00000498466 ZNF121P58317 390 aaPredicted RBP11.25□□□□□ -0.61
CCDC58-207ENST00000498466 KRTAP10-11P60412 298 aa11.25□□□□□ -0.61
CCDC58-207ENST00000498466 LHFPL4Q7Z7J7 247 aa11.25□□□□□ -0.61
CCDC58-207ENST00000498466 FAM86B1Q8N7N1 296 aa11.25□□□□□ -0.61
CCDC58-207ENST00000498466 ZNF511Q8NB15 262 aa11.25□□□□□ -0.61
CCDC58-207ENST00000498466 OR52L1Q8NGH7 329 aa11.25□□□□□ -0.61
CCDC58-207ENST00000498466 OR52H1Q8NGJ2 320 aa11.25□□□□□ -0.61
CCDC58-207ENST00000498466 OR5K1Q8NHB7 308 aa11.25□□□□□ -0.61
CCDC58-207ENST00000498466 RPS4Y2Q8TD47 263 aa11.25□□□□□ -0.61
CCDC58-207ENST00000498466 OR5P3Q8WZ94 311 aa11.25□□□□□ -0.61
CCDC58-207ENST00000498466 RNF170Q96K19 258 aa11.25□□□□□ -0.61
CCDC58-207ENST00000498466 HOPXQ9BPY8 73 aaPredicted RBP11.25□□□□□ -0.61
CCDC58-207ENST00000498466 EGLN3Q9H6Z9 239 aa11.25□□□□□ -0.61
CCDC58-207ENST00000498466 ABCB9Q9NP78 766 aa11.25□□□□□ -0.61
CCDC58-207ENST00000498466 BRD7Q9NPI1 651 aa11.25□□□□□ -0.61
CCDC58-207ENST00000498466 PITPNC1Q9UKF7 332 aa11.25□□□□□ -0.61
CCDC58-207ENST00000498466 SAMD4AQ9UPU9 718 aaKnown RBP11.25□□□□□ -0.61
CCDC58-207ENST00000498466 hCG_1809904A0A1W2PP81 198 aa11.24□□□□□ -0.61
CCDC58-207ENST00000498466 A0A1W2PPE2 198 aa11.24□□□□□ -0.61
CCDC58-207ENST00000498466 A0A1W2PR64 198 aa11.24□□□□□ -0.61
CCDC58-207ENST00000498466 A0A1W2PRV1 198 aa11.24□□□□□ -0.61
CCDC58-207ENST00000498466 A6NDX4 124 aa11.24□□□□□ -0.61
CCDC58-207ENST00000498466 APOC1P02654 83 aa11.24□□□□□ -0.61
CCDC58-207ENST00000498466 ALDOBP05062 364 aa11.24□□□□□ -0.61
CCDC58-207ENST00000498466 GYPBP06028 91 aa11.24□□□□□ -0.61
CCDC58-207ENST00000498466 GSSP48637 474 aa11.24□□□□□ -0.61
CCDC58-207ENST00000498466 ERVFRD-1P60508 538 aa11.24□□□□□ -0.61
CCDC58-207ENST00000498466 RPL31P62899 125 aaKnown RBP11.24□□□□□ -0.61
CCDC58-207ENST00000498466 EIF2B1Q14232 305 aaKnown RBP11.24□□□□□ -0.61
CCDC58-207ENST00000498466 TMEM95Q3KNT9 176 aa11.24□□□□□ -0.61
CCDC58-207ENST00000498466 FAM76BQ5HYJ3 339 aa11.24□□□□□ -0.61
CCDC58-207ENST00000498466 PRSS45Q7RTY3 260 aa11.24□□□□□ -0.61
CCDC58-207ENST00000498466 TIGD4Q8IY51 512 aa11.24□□□□□ -0.61
CCDC58-207ENST00000498466 DYNAPQ8N1N2 210 aa11.24□□□□□ -0.61
CCDC58-207ENST00000498466 SLC37A3Q8NCC5 494 aa11.24□□□□□ -0.61
CCDC58-207ENST00000498466 OR6K6Q8NGW6 343 aa11.24□□□□□ -0.61
CCDC58-207ENST00000498466 GNPDA2Q8TDQ7 276 aa11.24□□□□□ -0.61
CCDC58-207ENST00000498466 PIGCQ92535 297 aa11.24□□□□□ -0.61
CCDC58-207ENST00000498466 PGAM5Q96HS1 289 aa11.24□□□□□ -0.61
CCDC58-207ENST00000498466 RCC1LQ96I51 464 aaKnown RBP11.24□□□□□ -0.61
CCDC58-207ENST00000498466 YY1AP1Q9H869 796 aa11.24□□□□□ -0.61
CCDC58-207ENST00000498466 ZNF319Q9P2F9 582 aa11.24□□□□□ -0.61
CCDC58-207ENST00000498466 CD300AQ9UGN4 299 aa11.24□□□□□ -0.61
CCDC58-207ENST00000498466 V9GYQ6 96 aa11.24□□□□□ -0.61
CCDC58-207ENST00000498466 HMGB1P1B2RPK0 211 aaPredicted RBP11.23□□□□□ -0.61
CCDC58-207ENST00000498466 E9PQ18 207 aa11.23□□□□□ -0.61
CCDC58-207ENST00000498466 RHBDL1O75783 438 aa11.23□□□□□ -0.61
CCDC58-207ENST00000498466 BLCAPP62952 87 aa11.23□□□□□ -0.61
CCDC58-207ENST00000498466 CD83Q01151 205 aa11.23□□□□□ -0.61
CCDC58-207ENST00000498466 TSPAN31Q12999 210 aa11.23□□□□□ -0.61
CCDC58-207ENST00000498466 TEX30Q5JUR7 227 aa11.23□□□□□ -0.61
CCDC58-207ENST00000498466 GLYATQ6IB77 296 aa11.23□□□□□ -0.61
CCDC58-207ENST00000498466 ZNF782Q6ZMW2 699 aaPredicted RBP11.23□□□□□ -0.61
CCDC58-207ENST00000498466 Q6ZS46 218 aa11.23□□□□□ -0.61
CCDC58-207ENST00000498466 ZDHHC23Q8IYP9 409 aa11.23□□□□□ -0.61
CCDC58-207ENST00000498466 OR5AU1Q8NGC0 362 aa11.23□□□□□ -0.61
CCDC58-207ENST00000498466 RP9Q8TA86 221 aaKnown RBP11.23□□□□□ -0.61
CCDC58-207ENST00000498466 HPSE2Q8WWQ2 592 aa11.23□□□□□ -0.61
CCDC58-207ENST00000498466 FOXRED1Q96CU9 486 aaPredicted RBP11.23□□□□□ -0.61
CCDC58-207ENST00000498466 SDSLQ96GA7 329 aa11.23□□□□□ -0.61
CCDC58-207ENST00000498466 HIST1H2AAQ96QV6 131 aa11.23□□□□□ -0.61
CCDC58-207ENST00000498466 B9D2Q9BPU9 175 aa11.23□□□□□ -0.61
CCDC58-207ENST00000498466 FGF23Q9GZV9 251 aaPredicted RBP11.23□□□□□ -0.61
CCDC58-207ENST00000498466 MUC13Q9H3R2 512 aa11.23□□□□□ -0.61
CCDC58-207ENST00000498466 RGCCQ9H4X1 137 aa11.23□□□□□ -0.61
CCDC58-207ENST00000498466 DCAF13Q9NV06 445 aaKnown RBP11.23□□□□□ -0.61
CCDC58-207ENST00000498466 USE1Q9NZ43 259 aa11.23□□□□□ -0.61
CCDC58-207ENST00000498466 ZNF222Q9UK12 451 aa11.23□□□□□ -0.61
CCDC58-207ENST00000498466 LRP12Q9Y561 859 aa11.23□□□□□ -0.61
CCDC58-207ENST00000498466 FAM90A8PA6NJQ4 464 aa11.22□□□□□ -0.61
CCDC58-207ENST00000498466 NDUFAB1O14561 156 aa11.22□□□□□ -0.61
CCDC58-207ENST00000498466 DUS4LO95620 317 aaKnown RBP11.22□□□□□ -0.61
CCDC58-207ENST00000498466 CST4P01036 141 aa11.22□□□□□ -0.61
CCDC58-207ENST00000498466 ARG1P05089 322 aa11.22□□□□□ -0.61
CCDC58-207ENST00000498466 CCL3L1P16619 93 aa11.22□□□□□ -0.61
CCDC58-207ENST00000498466 ACKR3P25106 362 aa11.22□□□□□ -0.61
CCDC58-207ENST00000498466 HOXD3P31249 432 aaPredicted RBP11.22□□□□□ -0.61
CCDC58-207ENST00000498466 DCTDP32321 178 aa11.22□□□□□ -0.61
CCDC58-207ENST00000498466 GPM6AP51674 278 aa11.22□□□□□ -0.61
CCDC58-207ENST00000498466 SLC25A1P53007 311 aa11.22□□□□□ -0.61
CCDC58-207ENST00000498466 SSX2Q16385 188 aa11.22□□□□□ -0.61
CCDC58-207ENST00000498466 TMEM200BQ69YZ2 307 aa11.22□□□□□ -0.61
CCDC58-207ENST00000498466 RPL13AP3Q6NVV1 102 aa11.22□□□□□ -0.61
CCDC58-207ENST00000498466 CCDC121Q6ZUS5 278 aa11.22□□□□□ -0.61
CCDC58-207ENST00000498466 THAP5Q7Z6K1 395 aa11.22□□□□□ -0.61
CCDC58-207ENST00000498466 C11orf42Q8N5U0 333 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms