RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 RPL36Q9Y3U8 105 aaKnown RBP15.31■□□□□ 0.04
PRKCB-209ENST00000498058 TGP01266 2768 aa15.3■□□□□ 0.04
PRKCB-209ENST00000498058 TRAV38-1A0A0B4J264 116 aa15.3■□□□□ 0.04
PRKCB-209ENST00000498058 ZNF593O00488 134 aaPredicted RBP15.3■□□□□ 0.04
PRKCB-209ENST00000498058 DVL1O14640 695 aa15.3■□□□□ 0.04
PRKCB-209ENST00000498058 ENTPD1P49961 510 aa15.3■□□□□ 0.04
PRKCB-209ENST00000498058 ARF6P62330 175 aa15.3■□□□□ 0.04
PRKCB-209ENST00000498058 PDLIM3Q53GG5 364 aaPredicted RBP15.3■□□□□ 0.04
PRKCB-209ENST00000498058 LINC01590Q5TEZ4 76 aa15.3■□□□□ 0.04
PRKCB-209ENST00000498058 TEX36Q5VZQ5 186 aa15.3■□□□□ 0.04
PRKCB-209ENST00000498058 CD276Q5ZPR3 534 aa15.3■□□□□ 0.04
PRKCB-209ENST00000498058 BTN2A1Q7KYR7 527 aa15.3■□□□□ 0.04
PRKCB-209ENST00000498058 RHOUQ7L0Q8 258 aa15.3■□□□□ 0.04
PRKCB-209ENST00000498058 FBLIM1Q8WUP2 373 aa15.3■□□□□ 0.04
PRKCB-209ENST00000498058 LHX4Q969G2 390 aa15.3■□□□□ 0.04
PRKCB-209ENST00000498058 HAO2Q9NYQ3 351 aa15.3■□□□□ 0.04
PRKCB-209ENST00000498058 ZNF319Q9P2F9 582 aa15.3■□□□□ 0.04
PRKCB-209ENST00000498058 LRRC42Q9Y546 428 aa15.3■□□□□ 0.04
PRKCB-209ENST00000498058 IGHV1-69DA0A0B4J2H0 117 aa15.29■□□□□ 0.04
PRKCB-209ENST00000498058 A0A0U1RQK1 487 aa15.29■□□□□ 0.04
PRKCB-209ENST00000498058 IRGMA1A4Y4 181 aa15.29■□□□□ 0.04
PRKCB-209ENST00000498058 A6NLC8 198 aa15.29■□□□□ 0.04
PRKCB-209ENST00000498058 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.29■□□□□ 0.04
PRKCB-209ENST00000498058 NDUFA7O95182 113 aa15.29■□□□□ 0.04
PRKCB-209ENST00000498058 KNG1P01042 644 aa15.29■□□□□ 0.04
PRKCB-209ENST00000498058 IGHV1-69P01742 117 aa15.29■□□□□ 0.04
PRKCB-209ENST00000498058 LIPFP07098 398 aa15.29■□□□□ 0.04
PRKCB-209ENST00000498058 AMY2BP19961 511 aa15.29■□□□□ 0.04
PRKCB-209ENST00000498058 ATP6V1E1P36543 226 aa15.29■□□□□ 0.04
PRKCB-209ENST00000498058 FAM3AP98173 230 aa15.29■□□□□ 0.04
PRKCB-209ENST00000498058 OLFML2AQ68BL7 652 aa15.29■□□□□ 0.04
PRKCB-209ENST00000498058 SLC16A9Q7RTY1 509 aa15.29■□□□□ 0.04
PRKCB-209ENST00000498058 PRSS45Q7RTY3 260 aa15.29■□□□□ 0.04
PRKCB-209ENST00000498058 BCDIN3DQ7Z5W3 292 aaKnown RBP15.29■□□□□ 0.04
PRKCB-209ENST00000498058 PDZD9Q8IXQ8 264 aa15.29■□□□□ 0.04
PRKCB-209ENST00000498058 TMEM86BQ8N661 226 aa15.29■□□□□ 0.04
PRKCB-209ENST00000498058 CNIH3Q8TBE1 160 aa15.29■□□□□ 0.04
PRKCB-209ENST00000498058 SGK3Q96BR1 496 aa15.29■□□□□ 0.04
PRKCB-209ENST00000498058 INTS14Q96SY0 518 aa15.29■□□□□ 0.04
PRKCB-209ENST00000498058 CNN2Q99439 309 aaKnown RBP15.29■□□□□ 0.04
PRKCB-209ENST00000498058 ACOXLQ9NUZ1 547 aa15.29■□□□□ 0.04
PRKCB-209ENST00000498058 NOP16Q9Y3C1 178 aaKnown RBP15.29■□□□□ 0.04
PRKCB-209ENST00000498058 hCG_1807616A0A1W2PRN6 198 aa15.28■□□□□ 0.04
PRKCB-209ENST00000498058 CCDC182A6NF36 153 aa15.28■□□□□ 0.04
PRKCB-209ENST00000498058 WBP4O75554 376 aaKnown RBP15.28■□□□□ 0.04
PRKCB-209ENST00000498058 IGHV4-59P01825 116 aa15.28■□□□□ 0.04
PRKCB-209ENST00000498058 CXCR4P61073 352 aa15.28■□□□□ 0.04
PRKCB-209ENST00000498058 PRB3Q04118 309 aaPredicted RBP15.28■□□□□ 0.04
PRKCB-209ENST00000498058 KCNJ8Q15842 424 aa15.28■□□□□ 0.04
PRKCB-209ENST00000498058 KLHL22Q53GT1 634 aa15.28■□□□□ 0.04
PRKCB-209ENST00000498058 TEX30Q5JUR7 227 aa15.28■□□□□ 0.04
PRKCB-209ENST00000498058 SHFQ7M4L6 423 aa15.28■□□□□ 0.04
PRKCB-209ENST00000498058 PIP4P2Q8N4L2 257 aa15.28■□□□□ 0.04
PRKCB-209ENST00000498058 PNLDC1Q8NA58 520 aaKnown RBP15.28■□□□□ 0.04
PRKCB-209ENST00000498058 OR4F5Q8NH21 305 aa15.28■□□□□ 0.04
PRKCB-209ENST00000498058 APH1BQ8WW43 257 aa15.28■□□□□ 0.04
PRKCB-209ENST00000498058 GATAD2BQ8WXI9 593 aa15.28■□□□□ 0.04
PRKCB-209ENST00000498058 FAM71F1Q96KD3 344 aaPredicted RBP15.28■□□□□ 0.04
PRKCB-209ENST00000498058 AMELYQ99218 206 aa15.28■□□□□ 0.04
PRKCB-209ENST00000498058 CITED1Q99966 193 aa15.28■□□□□ 0.04
PRKCB-209ENST00000498058 BEX1Q9HBH7 125 aa15.28■□□□□ 0.04
PRKCB-209ENST00000498058 SCN3BQ9NY72 215 aa15.28■□□□□ 0.04
PRKCB-209ENST00000498058 KAAG1Q9UBP8 84 aa15.28■□□□□ 0.04
PRKCB-209ENST00000498058 PRKDCP78527 4128 aaKnown RBP15.27■□□□□ 0.04
PRKCB-209ENST00000498058 CLPSL1A2RUU4 121 aa15.27■□□□□ 0.04
PRKCB-209ENST00000498058 ZNF878C9JN71 531 aa15.27■□□□□ 0.04
PRKCB-209ENST00000498058 TBX1O43435 398 aa15.27■□□□□ 0.04
PRKCB-209ENST00000498058 NDUFA2O43678 99 aa15.27■□□□□ 0.04
PRKCB-209ENST00000498058 CX3CR1P49238 355 aa15.27■□□□□ 0.04
PRKCB-209ENST00000498058 DLX1P56177 255 aa15.27■□□□□ 0.04
PRKCB-209ENST00000498058 TAF13Q15543 124 aa15.27■□□□□ 0.04
PRKCB-209ENST00000498058 C6orf141Q5SZD1 244 aa15.27■□□□□ 0.04
PRKCB-209ENST00000498058 METTL11BQ5VVY1 283 aa15.27■□□□□ 0.04
PRKCB-209ENST00000498058 ERI1Q8IV48 349 aaKnown RBP15.27■□□□□ 0.04
PRKCB-209ENST00000498058 SPERTQ8NA61 448 aa15.27■□□□□ 0.04
PRKCB-209ENST00000498058 OR1M1Q8NGA1 313 aa15.27■□□□□ 0.04
PRKCB-209ENST00000498058 LRRC29Q8WV35 223 aa15.27■□□□□ 0.04
PRKCB-209ENST00000498058 ST8SIA4Q92187 359 aa15.27■□□□□ 0.04
PRKCB-209ENST00000498058 RNFT2Q96EX2 444 aa15.27■□□□□ 0.04
PRKCB-209ENST00000498058 MYCBPQ99417 103 aaPredicted RBP15.27■□□□□ 0.04
PRKCB-209ENST00000498058 MNTQ99583 582 aa15.27■□□□□ 0.04
PRKCB-209ENST00000498058 CCL13Q99616 98 aa15.27■□□□□ 0.04
PRKCB-209ENST00000498058 PLCXD1Q9NUJ7 323 aa15.27■□□□□ 0.04
PRKCB-209ENST00000498058 AASSQ9UDR5 926 aa15.27■□□□□ 0.04
PRKCB-209ENST00000498058 RPUSD1Q9UJJ7 312 aaKnown RBP15.27■□□□□ 0.04
PRKCB-209ENST00000498058 BLOC1S6Q9UL45 172 aa15.27■□□□□ 0.04
PRKCB-209ENST00000498058 POMT1Q9Y6A1 747 aa15.27■□□□□ 0.04
PRKCB-209ENST00000498058 TMEM14AQ9Y6G1 99 aa15.27■□□□□ 0.04
PRKCB-209ENST00000498058 A0A1B0GUS0 222 aa15.26■□□□□ 0.03
PRKCB-209ENST00000498058 hCG_38984A0A1B0GV85 526 aa15.26■□□□□ 0.03
PRKCB-209ENST00000498058 EFCAB10A6NFE3 127 aa15.26■□□□□ 0.03
PRKCB-209ENST00000498058 XRCC2O43543 280 aa15.26■□□□□ 0.03
PRKCB-209ENST00000498058 GPR137BO60478 399 aa15.26■□□□□ 0.03
PRKCB-209ENST00000498058 FADS2O95864 444 aaKnown RBP15.26■□□□□ 0.03
PRKCB-209ENST00000498058 CRYBA1P05813 215 aa15.26■□□□□ 0.03
PRKCB-209ENST00000498058 DBTP11182 482 aaKnown RBP15.26■□□□□ 0.03
PRKCB-209ENST00000498058 IER3P46695 156 aa15.26■□□□□ 0.03
PRKCB-209ENST00000498058 ZNF91Q05481 1191 aa15.26■□□□□ 0.03
PRKCB-209ENST00000498058 RAB40BQ12829 278 aa15.26■□□□□ 0.03
PRKCB-209ENST00000498058 EIF2B1Q14232 305 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms