RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 FAM201AQ5SY85 155 aa12.84□□□□□ -0.35
NUP50-219ENST00000497960 TMPRSS11AQ6ZMR5 421 aa12.84□□□□□ -0.35
NUP50-219ENST00000497960 PRSS45Q7RTY3 260 aa12.84□□□□□ -0.35
NUP50-219ENST00000497960 KCTD20Q7Z5Y7 419 aa12.84□□□□□ -0.35
NUP50-219ENST00000497960 SYS1Q8N2H4 156 aa12.84□□□□□ -0.35
NUP50-219ENST00000497960 OR8B3Q8NGG8 313 aa12.84□□□□□ -0.35
NUP50-219ENST00000497960 OR8S1Q8NH09 359 aa12.84□□□□□ -0.35
NUP50-219ENST00000497960 DVL3Q92997 716 aaPredicted RBP12.84□□□□□ -0.35
NUP50-219ENST00000497960 NEIL1Q96FI4 390 aaPredicted RBP12.84□□□□□ -0.35
NUP50-219ENST00000497960 OR8B2Q96RD0 313 aa12.84□□□□□ -0.35
NUP50-219ENST00000497960 TMEM246Q9BRR3 403 aa12.84□□□□□ -0.35
NUP50-219ENST00000497960 C19orf24Q9BVV8 132 aa12.84□□□□□ -0.35
NUP50-219ENST00000497960 SSBP3Q9BWW4 388 aaPredicted RBP12.84□□□□□ -0.35
NUP50-219ENST00000497960 PBOV1Q9GZY1 135 aa12.84□□□□□ -0.35
NUP50-219ENST00000497960 MMP26Q9NRE1 261 aa12.84□□□□□ -0.35
NUP50-219ENST00000497960 RNF7Q9UBF6 113 aa12.84□□□□□ -0.35
NUP50-219ENST00000497960 NUFIP1Q9UHK0 495 aaKnown RBP12.84□□□□□ -0.35
NUP50-219ENST00000497960 OR52A1Q9UKL2 312 aa12.84□□□□□ -0.35
NUP50-219ENST00000497960 CAB39Q9Y376 341 aaPredicted RBP12.84□□□□□ -0.35
NUP50-219ENST00000497960 SNX5Q9Y5X3 404 aa12.84□□□□□ -0.35
NUP50-219ENST00000497960 SVEP1Q4LDE5 3571 aa12.83□□□□□ -0.36
NUP50-219ENST00000497960 ACOD1A6NK06 481 aa12.83□□□□□ -0.36
NUP50-219ENST00000497960 A6NLC8 198 aa12.83□□□□□ -0.36
NUP50-219ENST00000497960 PTBP3O95758 552 aaKnown RBP12.83□□□□□ -0.36
NUP50-219ENST00000497960 GRPP07492 148 aa12.83□□□□□ -0.36
NUP50-219ENST00000497960 CRHBPP24387 322 aa12.83□□□□□ -0.36
NUP50-219ENST00000497960 EEF1B2P24534 225 aaKnown RBP12.83□□□□□ -0.36
NUP50-219ENST00000497960 GNB2P62879 340 aa12.83□□□□□ -0.36
NUP50-219ENST00000497960 ZNF154Q13106 437 aa12.83□□□□□ -0.36
NUP50-219ENST00000497960 KCNJ8Q15842 424 aa12.83□□□□□ -0.36
NUP50-219ENST00000497960 FTMTQ8N4E7 242 aa12.83□□□□□ -0.36
NUP50-219ENST00000497960 BOLLQ8N9W6 283 aaKnown RBP12.83□□□□□ -0.36
NUP50-219ENST00000497960 DEFB108BQ8NET1 73 aa12.83□□□□□ -0.36
NUP50-219ENST00000497960 CSNK2A3Q8NEV1 391 aa12.83□□□□□ -0.36
NUP50-219ENST00000497960 PELI1Q96FA3 418 aa12.83□□□□□ -0.36
NUP50-219ENST00000497960 ZNF649Q9BS31 505 aa12.83□□□□□ -0.36
NUP50-219ENST00000497960 MRI1Q9BV20 369 aa12.83□□□□□ -0.36
NUP50-219ENST00000497960 CCDC90BQ9GZT6 254 aa12.83□□□□□ -0.36
NUP50-219ENST00000497960 ISG20L2Q9H9L3 353 aaKnown RBP12.83□□□□□ -0.36
NUP50-219ENST00000497960 PAK1IP1Q9NWT1 392 aaPredicted RBP12.83□□□□□ -0.36
NUP50-219ENST00000497960 OPN4Q9UHM6 478 aa12.83□□□□□ -0.36
NUP50-219ENST00000497960 AUP1Q9Y679 476 aa12.83□□□□□ -0.36
NUP50-219ENST00000497960 DOCK11Q5JSL3 2073 aa12.83□□□□□ -0.36
NUP50-219ENST00000497960 DNHD1Q96M86 4753 aa12.83□□□□□ -0.36
NUP50-219ENST00000497960 hCG_38984A0A1B0GV85 526 aa12.82□□□□□ -0.36
NUP50-219ENST00000497960 TRAPPC2LH3BP13 241 aa12.82□□□□□ -0.36
NUP50-219ENST00000497960 RGS10O43665 173 aa12.82□□□□□ -0.36
NUP50-219ENST00000497960 ZNF12P17014 697 aa12.82□□□□□ -0.36
NUP50-219ENST00000497960 C21orf33P30042 268 aaPredicted RBP12.82□□□□□ -0.36
NUP50-219ENST00000497960 GNALP38405 381 aa12.82□□□□□ -0.36
NUP50-219ENST00000497960 GSK3AP49840 483 aa12.82□□□□□ -0.36
NUP50-219ENST00000497960 GBX2P52951 348 aaPredicted RBP12.82□□□□□ -0.36
NUP50-219ENST00000497960 GABARAPL2P60520 117 aa12.82□□□□□ -0.36
NUP50-219ENST00000497960 SLC35A2P78381 396 aa12.82□□□□□ -0.36
NUP50-219ENST00000497960 MRPL28Q13084 256 aaKnown RBP12.82□□□□□ -0.36
NUP50-219ENST00000497960 ODF4Q2M2E3 257 aa12.82□□□□□ -0.36
NUP50-219ENST00000497960 WDR38Q5JTN6 314 aa12.82□□□□□ -0.36
NUP50-219ENST00000497960 OR2G6Q5TZ20 316 aa12.82□□□□□ -0.36
NUP50-219ENST00000497960 BTNL3Q6UXE8 466 aa12.82□□□□□ -0.36
NUP50-219ENST00000497960 DCDC5Q6ZRR9 648 aa12.82□□□□□ -0.36
NUP50-219ENST00000497960 CATSPERDQ86XM0 798 aa12.82□□□□□ -0.36
NUP50-219ENST00000497960 OR52N1Q8NH53 320 aa12.82□□□□□ -0.36
NUP50-219ENST00000497960 SGCDQ92629 289 aa12.82□□□□□ -0.36
NUP50-219ENST00000497960 RORBQ92753 470 aa12.82□□□□□ -0.36
NUP50-219ENST00000497960 PAPOLGQ9BWT3 736 aaKnown RBP12.82□□□□□ -0.36
NUP50-219ENST00000497960 TRIM36Q9NQ86 728 aa12.82□□□□□ -0.36
NUP50-219ENST00000497960 C1orf123Q9NWV4 160 aa12.82□□□□□ -0.36
NUP50-219ENST00000497960 ZNF319Q9P2F9 582 aa12.82□□□□□ -0.36
NUP50-219ENST00000497960 CLEC2DQ9UHP7 191 aa12.82□□□□□ -0.36
NUP50-219ENST00000497960 ZNF391Q9UJN7 358 aa12.82□□□□□ -0.36
NUP50-219ENST00000497960 ERGIC3Q9Y282 383 aa12.82□□□□□ -0.36
NUP50-219ENST00000497960 INSIG2Q9Y5U4 225 aa12.82□□□□□ -0.36
NUP50-219ENST00000497960 A0A0U1RQV5 110 aa12.81□□□□□ -0.36
NUP50-219ENST00000497960 hCG_1807616A0A1W2PRN6 198 aa12.81□□□□□ -0.36
NUP50-219ENST00000497960 LGALS8O00214 317 aa12.81□□□□□ -0.36
NUP50-219ENST00000497960 TTRP02766 147 aa12.81□□□□□ -0.36
NUP50-219ENST00000497960 MT-ND2P03891 347 aa12.81□□□□□ -0.36
NUP50-219ENST00000497960 FPR2P25090 351 aa12.81□□□□□ -0.36
NUP50-219ENST00000497960 PITPNBP48739 271 aa12.81□□□□□ -0.36
NUP50-219ENST00000497960 OR8B8Q15620 311 aa12.81□□□□□ -0.36
NUP50-219ENST00000497960 ARMCX4Q5H9R4 360 aa12.81□□□□□ -0.36
NUP50-219ENST00000497960 BPIFB2Q8N4F0 458 aa12.81□□□□□ -0.36
NUP50-219ENST00000497960 C19orf18Q8NEA5 215 aa12.81□□□□□ -0.36
NUP50-219ENST00000497960 OR2G2Q8NGZ5 317 aa12.81□□□□□ -0.36
NUP50-219ENST00000497960 OR51E1Q8TCB6 317 aa12.81□□□□□ -0.36
NUP50-219ENST00000497960 HAVCR2Q8TDQ0 301 aa12.81□□□□□ -0.36
NUP50-219ENST00000497960 FAM71F1Q96KD3 344 aaPredicted RBP12.81□□□□□ -0.36
NUP50-219ENST00000497960 JMJD8Q96S16 334 aa12.81□□□□□ -0.36
NUP50-219ENST00000497960 MND1Q9BWT6 205 aa12.81□□□□□ -0.36
NUP50-219ENST00000497960 SUCNR1Q9BXA5 334 aa12.81□□□□□ -0.36
NUP50-219ENST00000497960 ERVK-18Q9QC07 812 aa12.81□□□□□ -0.36
NUP50-219ENST00000497960 CLN8Q9UBY8 286 aa12.81□□□□□ -0.36
NUP50-219ENST00000497960 SLC22A13Q9Y226 551 aa12.81□□□□□ -0.36
NUP50-219ENST00000497960 TRAV38-1A0A0B4J264 116 aa12.8□□□□□ -0.36
NUP50-219ENST00000497960 A0A1B0GVI7 797 aa12.8□□□□□ -0.36
NUP50-219ENST00000497960 ANXA2P2A6NMY6 339 aa12.8□□□□□ -0.36
NUP50-219ENST00000497960 P2RY10O00398 339 aa12.8□□□□□ -0.36
NUP50-219ENST00000497960 RGS9O75916 674 aaPredicted RBP12.8□□□□□ -0.36
NUP50-219ENST00000497960 VENTXO95231 258 aa12.8□□□□□ -0.36
NUP50-219ENST00000497960 UBCP0CG48 685 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms