RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 OR2V2Q96R30 315 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 BCL7BQ9BQE9 202 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 SMURF1Q9HCE7 757 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 MIOXQ9UGB7 285 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 ST6GALNAC2Q9UJ37 374 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 FREM3P0C091 2139 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 OGG1O15527 345 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 PEX14O75381 377 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 PNPP00491 289 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 ISG15P05161 165 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 GTF2F2P13984 249 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 RPS2P15880 293 aaKnown RBP7.4□□□□□ -1.22
U2AF1-212ENST00000496462 GABRB1P18505 474 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 S100GP29377 79 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 GZMKP49863 264 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 ART1P52961 327 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 GMFBP60983 142 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 ACSM1Q08AH1 577 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 CEACAM21Q3KPI0 293 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 ATAD3CQ5T2N8 411 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 UTS2BQ765I0 119 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 GDPD3Q7L5L3 318 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 ASCC1Q8N9N2 400 aaKnown RBP7.4□□□□□ -1.22
U2AF1-212ENST00000496462 ITLN1Q8WWA0 313 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 MARS2Q96GW9 593 aaKnown RBP7.4□□□□□ -1.22
U2AF1-212ENST00000496462 NPAP1Q9NZP6 1156 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 OR14J1Q9UGF5 321 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 V9GY05 133 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 TEX15Q9BXT5 2789 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 DEFB108AA8MXU0 73 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 LGALS8O00214 317 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 SLC22A1O15245 554 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 GALP22466 123 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 GABRR1P24046 479 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 CCKARP32238 428 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 PSG7Q13046 419 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 HLXQ14774 488 aaPredicted RBP7.4□□□□□ -1.22
U2AF1-212ENST00000496462 ADIPOQQ15848 244 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 C11orf88Q6PI97 169 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 TRAPPC6BQ86SZ2 158 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 OR5D13Q8NGL4 314 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 OR51F2Q8NH61 342 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 PDCD1LG2Q9BQ51 273 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 NUDT16L1Q9BRJ7 211 aaKnown RBP7.4□□□□□ -1.22
U2AF1-212ENST00000496462 CHST5Q9GZS9 411 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 CHODLQ9H9P2 273 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 RHOFQ9HBH0 211 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 FAM206AQ9NX38 181 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 RASL12Q9NYN1 266 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 CLEC2DQ9UHP7 191 aa7.4□□□□□ -1.22
U2AF1-212ENST00000496462 MRPS28Q9Y2Q9 187 aaKnown RBP7.4□□□□□ -1.22
U2AF1-212ENST00000496462 TRDV1A0A1B0GX56 115 aa7.4□□□□□ -1.23
U2AF1-212ENST00000496462 PLPP2O43688 288 aa7.4□□□□□ -1.23
U2AF1-212ENST00000496462 TTRP02766 147 aa7.4□□□□□ -1.23
U2AF1-212ENST00000496462 SDC2P34741 201 aa7.4□□□□□ -1.23
U2AF1-212ENST00000496462 CDKN1AP38936 164 aa7.4□□□□□ -1.23
U2AF1-212ENST00000496462 RORCP51449 518 aa7.4□□□□□ -1.23
U2AF1-212ENST00000496462 GPM6AP51674 278 aa7.4□□□□□ -1.23
U2AF1-212ENST00000496462 MRPS11P82912 194 aaKnown RBP7.4□□□□□ -1.23
U2AF1-212ENST00000496462 EMX1Q04741 257 aaPredicted RBP7.4□□□□□ -1.23
U2AF1-212ENST00000496462 ARFRP1Q13795 201 aa7.4□□□□□ -1.23
U2AF1-212ENST00000496462 CEP78Q5JTW2 689 aa7.4□□□□□ -1.23
U2AF1-212ENST00000496462 CDH26Q8IXH8 852 aa7.4□□□□□ -1.23
U2AF1-212ENST00000496462 LRRC75A-AS1Q8N1F1 130 aa7.4□□□□□ -1.23
U2AF1-212ENST00000496462 DEFB108BQ8NET1 73 aa7.4□□□□□ -1.23
U2AF1-212ENST00000496462 FGFBP3Q8TAT2 258 aa7.4□□□□□ -1.23
U2AF1-212ENST00000496462 APH1BQ8WW43 257 aa7.4□□□□□ -1.23
U2AF1-212ENST00000496462 TRAF4Q9BUZ4 470 aaPredicted RBP7.4□□□□□ -1.23
U2AF1-212ENST00000496462 BARHL1Q9BZE3 327 aa7.4□□□□□ -1.23
U2AF1-212ENST00000496462 RABL2AQ9UBK7 228 aaPredicted RBP7.4□□□□□ -1.23
U2AF1-212ENST00000496462 RABL2BQ9UNT1 228 aa7.4□□□□□ -1.23
U2AF1-212ENST00000496462 A0A1W2PQ09 198 aa7.39□□□□□ -1.23
U2AF1-212ENST00000496462 OR4C45A6NMZ5 311 aa7.39□□□□□ -1.23
U2AF1-212ENST00000496462 FOXH1O75593 365 aa7.39□□□□□ -1.23
U2AF1-212ENST00000496462 CRTAPO75718 401 aaPredicted RBP7.39□□□□□ -1.23
U2AF1-212ENST00000496462 CD3GP09693 182 aa7.39□□□□□ -1.23
U2AF1-212ENST00000496462 CALCRP30988 508 aa7.39□□□□□ -1.23
U2AF1-212ENST00000496462 FAM3AP98173 230 aa7.39□□□□□ -1.23
U2AF1-212ENST00000496462 HGFACQ04756 655 aa7.39□□□□□ -1.23
U2AF1-212ENST00000496462 GPR107Q5VW38 600 aa7.39□□□□□ -1.23
U2AF1-212ENST00000496462 ACOT12Q8WYK0 555 aa7.39□□□□□ -1.23
U2AF1-212ENST00000496462 MEGF10Q96KG7 1140 aa7.39□□□□□ -1.23
U2AF1-212ENST00000496462 PKIBQ9C010 78 aa7.39□□□□□ -1.23
U2AF1-212ENST00000496462 LPAR3Q9UBY5 353 aa7.39□□□□□ -1.23
U2AF1-212ENST00000496462 RBM7Q9Y580 266 aaKnown RBP7.39□□□□□ -1.23
U2AF1-212ENST00000496462 MCRIP1C9JLW8 97 aa7.39□□□□□ -1.23
U2AF1-212ENST00000496462 NAT2P11245 290 aa7.39□□□□□ -1.23
U2AF1-212ENST00000496462 CPEP16870 476 aa7.39□□□□□ -1.23
U2AF1-212ENST00000496462 NDUFB7P17568 137 aa7.39□□□□□ -1.23
U2AF1-212ENST00000496462 MDH2P40926 338 aaKnown RBP7.39□□□□□ -1.23
U2AF1-212ENST00000496462 DEFB113Q30KQ7 82 aa7.39□□□□□ -1.23
U2AF1-212ENST00000496462 UBE2UQ5VVX9 321 aa7.39□□□□□ -1.23
U2AF1-212ENST00000496462 RAB12Q6IQ22 244 aa7.39□□□□□ -1.23
U2AF1-212ENST00000496462 TMEM185AQ8NFB2 350 aa7.39□□□□□ -1.23
U2AF1-212ENST00000496462 OR10AD1Q8NGE0 317 aa7.39□□□□□ -1.23
U2AF1-212ENST00000496462 MUL1Q969V5 352 aa7.39□□□□□ -1.23
U2AF1-212ENST00000496462 ABRACLQ9P1F3 81 aa7.39□□□□□ -1.23
U2AF1-212ENST00000496462 MGAT4AQ9UM21 535 aa7.39□□□□□ -1.23
U2AF1-212ENST00000496462 KLHDC2Q9Y2U9 406 aa7.39□□□□□ -1.23
U2AF1-212ENST00000496462 CLEC18AA5D8T8 446 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms