RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 PRLHRP49683 370 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 PRKXP51817 358 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 RAP1GDS1P52306 607 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 CRISP1P54107 249 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 C1QTNF8P60827 252 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 ST3GAL3Q11203 375 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 MED21Q13503 144 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 OR5I1Q13606 314 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 EBI3Q14213 229 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 C16orf72Q14CZ0 275 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 OXA1LQ15070 435 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 SF3A2Q15428 464 aaKnown RBP3.48□□□□□ -1.85
SF3B1-212ENST00000496458 EXOC3L4Q17RC7 722 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 CARD16Q5EG05 197 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 TMEM31Q5JXX7 168 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 LCE1CQ5T751 118 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 PPP1R2P3Q6NXS1 205 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 FAM199XQ6PEV8 388 aaPredicted RBP3.48□□□□□ -1.85
SF3B1-212ENST00000496458 LINC00299Q6ZSB3 139 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 CMC1Q7Z7K0 106 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 C17orf82Q86X59 251 aaPredicted RBP3.48□□□□□ -1.85
SF3B1-212ENST00000496458 RAD51AP1Q96B01 352 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 CELF6Q96J87 481 aaKnown RBP3.48□□□□□ -1.85
SF3B1-212ENST00000496458 DNAJC1Q96KC8 554 aaKnown RBP3.48□□□□□ -1.85
SF3B1-212ENST00000496458 ZFP3Q96NJ6 502 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 TIMM29Q9BSF4 260 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 MROQ9BYG7 248 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 COA1Q9GZY4 146 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 NAA50Q9GZZ1 169 aaKnown RBP3.48□□□□□ -1.85
SF3B1-212ENST00000496458 PPDPFQ9H3Y8 114 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 METTL8Q9H825 291 aaKnown RBP3.48□□□□□ -1.85
SF3B1-212ENST00000496458 TRIM45Q9H8W5 580 aaPredicted RBP3.48□□□□□ -1.85
SF3B1-212ENST00000496458 SIAEQ9HAT2 523 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 MRPL40Q9NQ50 206 aaKnown RBP3.48□□□□□ -1.85
SF3B1-212ENST00000496458 SAR1AQ9NR31 198 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 MAT2BQ9NZL9 334 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 ENOPH1Q9UHY7 261 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 UBQLN1Q9UMX0 589 aaKnown RBP3.48□□□□□ -1.85
SF3B1-212ENST00000496458 RCL1Q9Y2P8 373 aaKnown RBP3.48□□□□□ -1.85
SF3B1-212ENST00000496458 SCN4AP35499 1836 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 MYH7P12883 1935 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 MYH13Q9UKX3 1938 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 MED23Q9ULK4 1368 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 A0A1B0GUL6 1792 aa3.48□□□□□ -1.85
SF3B1-212ENST00000496458 PSME4Q14997 1843 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 CCDC160A6NGH7 325 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 ARGFXA6NJG6 315 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 ZNF98A6NK75 572 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 H3BN98 237 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 FCN1O00602 326 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 GPR171O14626 319 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 SOX15O60248 233 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 NOS1APO75052 506 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-212ENST00000496458 DCTN3O75935 186 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 PSMG1O95456 288 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 IGHV3-48P01763 117 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 APOC1P02654 83 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 GP1BAP07359 652 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 TCP1P17987 556 aaKnown RBP3.47□□□□□ -1.85
SF3B1-212ENST00000496458 F8A1P23610 371 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 IL12AP29459 219 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 ADORA1P30542 326 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 RCVRNP35243 200 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 CEACAM3P40198 252 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 MAGEA6P43360 314 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 TFPI2P48307 235 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 CSNK1A1P48729 337 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 DNASE1L1P49184 302 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 TGM4P49221 684 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 PPOXP50336 477 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 CCR8P51685 355 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 MAGOHP61326 146 aaKnown RBP3.47□□□□□ -1.85
SF3B1-212ENST00000496458 PITPNAQ00169 270 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 NAB1Q13506 487 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 OR4D1Q15615 310 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 UAP1Q16222 522 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-212ENST00000496458 GABRA6Q16445 453 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 GOLGA7BQ2TAP0 167 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 TRMT5Q32P41 509 aaKnown RBP3.47□□□□□ -1.85
SF3B1-212ENST00000496458 TNFAIP8L3Q5GJ75 292 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 BRMS1LQ5PSV4 323 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 PP632Q6XCG6 107 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 DNM1P46Q6ZS02 220 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 PGAP1Q75T13 922 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 ABHD13Q7L211 337 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 RALGPS2Q86X27 583 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-212ENST00000496458 BOD1L2Q8IYS8 172 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 OR5K2Q8NHB8 316 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 ITFG1Q8TB96 612 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 TCTEX1D2Q8WW35 142 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 CENPNQ96H22 339 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-212ENST00000496458 ZNF717Q9BY31 904 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-212ENST00000496458 Q9H521 79 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 ZNF385DQ9H6B1 395 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 WDR55Q9H6Y2 383 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-212ENST00000496458 RETNQ9HD89 108 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 HRASLS2Q9NWW9 162 aa3.47□□□□□ -1.85
SF3B1-212ENST00000496458 THUMPD1Q9NXG2 353 aaKnown RBP3.47□□□□□ -1.85
SF3B1-212ENST00000496458 CCDC59Q9P031 241 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms