RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, human

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CXCL12-208	ENST00000496375	REEP6	Q96HR9	211 aa		11.99	□□□□□ -0.49
CXCL12-208	ENST00000496375	PGAM5	Q96HS1	289 aa		11.99	□□□□□ -0.49
CXCL12-208	ENST00000496375	SLC22A4	Q9H015	551 aa		11.99	□□□□□ -0.49
CXCL12-208	ENST00000496375	FGF20	Q9NP95	211 aa	Predicted RBP	11.99	□□□□□ -0.49
CXCL12-208	ENST00000496375	IKZF2	Q9UKS7	526 aa		11.99	□□□□□ -0.49
CXCL12-208	ENST00000496375	NOP16	Q9Y3C1	178 aa	Known RBP	11.99	□□□□□ -0.49
CXCL12-208	ENST00000496375		R4GMQ9	66 aa		11.99	□□□□□ -0.49
CXCL12-208	ENST00000496375	TRAV40	A0A0B4J280	105 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	KIR2DS1	A0A191URI9	304 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	TMEM269	A0A1B0GVZ9	245 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	METTL15	A6NJ78	407 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	PSMD9	O00233	223 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	FAM20B	O75063	409 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	PTBP3	O95758	552 aa	Known RBP	11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	FADS2	O95864	444 aa	Known RBP	11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	PLAT	P00750	562 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	KRT8	P05787	483 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	CD200	P41217	278 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	MFGE8	Q08431	387 aa	Predicted RBP	11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	BLMH	Q13867	455 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	SLC9A3R2	Q15599	337 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	TIGD6	Q17RP2	521 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	KLHL22	Q53GT1	634 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	PRR31	Q5SQ13	230 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	PRAMEF6	Q5VXH4	476 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	LAIR2	Q6ISS4	152 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	FDX2	Q6P4F2	183 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	LYPD2	Q6UXB3	125 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	IZUMO2	Q6UXV1	221 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	C9orf139	Q6ZV77	190 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	CELF2-AS1	Q8N7Q2	184 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	PLPP7	Q8NBV4	271 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	C19orf18	Q8NEA5	215 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	OR11L1	Q8NGX0	322 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	CNIH3	Q8TBE1	160 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375		Q8TCH9	128 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	LYZL4	Q96KX0	146 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	TBX5	Q99593	518 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	NUDT16L1	Q9BRJ7	211 aa	Known RBP	11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	TTTY10	Q9BZA0	68 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	PBOV1	Q9GZY1	135 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	UNKL	Q9H9P5	680 aa	Known RBP	11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	PLCXD1	Q9NUJ7	323 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	CLN8	Q9UBY8	286 aa		11.98	□□□□□ -0.49
CXCL12-208	ENST00000496375	MDFIC2	A0A1B0GVS7	189 aa		11.97	□□□□□ -0.49
CXCL12-208	ENST00000496375	IRGM	A1A4Y4	181 aa		11.97	□□□□□ -0.49
CXCL12-208	ENST00000496375	LOC110117498-PIK3R3	F6TDL0	507 aa		11.97	□□□□□ -0.49
CXCL12-208	ENST00000496375	CLDN34	H7C241	214 aa		11.97	□□□□□ -0.49
CXCL12-208	ENST00000496375	TBX1	O43435	398 aa		11.97	□□□□□ -0.49
CXCL12-208	ENST00000496375	TTR	P02766	147 aa		11.97	□□□□□ -0.49
CXCL12-208	ENST00000496375	PIP	P12273	146 aa	Predicted RBP	11.97	□□□□□ -0.49
CXCL12-208	ENST00000496375	ATP6V1B1	P15313	513 aa		11.97	□□□□□ -0.49
CXCL12-208	ENST00000496375	ACTA2	P62736	377 aa		11.97	□□□□□ -0.49
CXCL12-208	ENST00000496375	ACTG2	P63267	376 aa		11.97	□□□□□ -0.49
CXCL12-208	ENST00000496375	GALE	Q14376	348 aa		11.97	□□□□□ -0.49
CXCL12-208	ENST00000496375	OR8G1	Q15617	311 aa		11.97	□□□□□ -0.49
CXCL12-208	ENST00000496375	SMN1	Q16637	294 aa	Known RBP	11.97	□□□□□ -0.49
CXCL12-208	ENST00000496375	WDR25	Q64LD2	544 aa	Predicted RBP	11.97	□□□□□ -0.49
CXCL12-208	ENST00000496375	DCDC5	Q6ZRR9	648 aa		11.97	□□□□□ -0.49
CXCL12-208	ENST00000496375	ELMOD2	Q8IZ81	293 aa		11.97	□□□□□ -0.49
CXCL12-208	ENST00000496375	SYS1	Q8N2H4	156 aa		11.97	□□□□□ -0.49
CXCL12-208	ENST00000496375	OR56B2P	Q8NGI1	322 aa		11.97	□□□□□ -0.49
CXCL12-208	ENST00000496375	OR52I1	Q8NGK6	324 aa		11.97	□□□□□ -0.49
CXCL12-208	ENST00000496375	SPRYD4	Q8WW59	207 aa	Predicted RBP	11.97	□□□□□ -0.49
CXCL12-208	ENST00000496375	TAF15	Q92804	592 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
CXCL12-208	ENST00000496375	ERGIC1	Q969X5	290 aa		11.97	□□□□□ -0.49
CXCL12-208	ENST00000496375	MYCBP	Q99417	103 aa	Predicted RBP	11.97	□□□□□ -0.49
CXCL12-208	ENST00000496375	AMBN	Q9NP70	447 aa		11.97	□□□□□ -0.49
CXCL12-208	ENST00000496375	UFSP2	Q9NUQ7	469 aa		11.97	□□□□□ -0.49
CXCL12-208	ENST00000496375	MYRF	Q9Y2G1	1151 aa		11.97	□□□□□ -0.49
CXCL12-208	ENST00000496375	SNX5	Q9Y5X3	404 aa		11.97	□□□□□ -0.49
CXCL12-208	ENST00000496375	DAPL1	A0PJW8	107 aa		11.96	□□□□□ -0.49
CXCL12-208	ENST00000496375	MAGEA13P	A6NCF6	341 aa		11.96	□□□□□ -0.49
CXCL12-208	ENST00000496375	GGT3P	A6NGU5	568 aa		11.96	□□□□□ -0.49
CXCL12-208	ENST00000496375	DHRS7C	A6NNS2	312 aa		11.96	□□□□□ -0.49
CXCL12-208	ENST00000496375	MAGEB4	O15481	346 aa	Predicted RBP	11.96	□□□□□ -0.49
CXCL12-208	ENST00000496375	GMDS	O60547	372 aa		11.96	□□□□□ -0.49
CXCL12-208	ENST00000496375	CCL1	P22362	96 aa		11.96	□□□□□ -0.49
CXCL12-208	ENST00000496375	CA6	P23280	308 aa		11.96	□□□□□ -0.49
CXCL12-208	ENST00000496375	HSPA13	P48723	471 aa		11.96	□□□□□ -0.49
CXCL12-208	ENST00000496375	GSK3A	P49840	483 aa		11.96	□□□□□ -0.49
CXCL12-208	ENST00000496375	FGF12	P61328	243 aa		11.96	□□□□□ -0.49
CXCL12-208	ENST00000496375	IL13RA1	P78552	427 aa		11.96	□□□□□ -0.49
CXCL12-208	ENST00000496375	HOXA4	Q00056	320 aa	Predicted RBP	11.96	□□□□□ -0.49
CXCL12-208	ENST00000496375	MPPED2	Q15777	294 aa		11.96	□□□□□ -0.49
CXCL12-208	ENST00000496375	ZBTB37	Q5TC79	503 aa		11.96	□□□□□ -0.49
CXCL12-208	ENST00000496375	ZNF841	Q6ZN19	808 aa		11.96	□□□□□ -0.49
CXCL12-208	ENST00000496375	THAP5	Q7Z6K1	395 aa		11.96	□□□□□ -0.49
CXCL12-208	ENST00000496375	CATSPERD	Q86XM0	798 aa		11.96	□□□□□ -0.49
CXCL12-208	ENST00000496375	YIPF7	Q8N8F6	280 aa		11.96	□□□□□ -0.49
CXCL12-208	ENST00000496375	CSNK2A3	Q8NEV1	391 aa		11.96	□□□□□ -0.49
CXCL12-208	ENST00000496375	RORB	Q92753	470 aa		11.96	□□□□□ -0.49
CXCL12-208	ENST00000496375	MRPL48	Q96GC5	212 aa	Known RBP	11.96	□□□□□ -0.49
CXCL12-208	ENST00000496375	ANKRD60	Q9BZ19	345 aa		11.96	□□□□□ -0.49
CXCL12-208	ENST00000496375		Q9H521	79 aa		11.96	□□□□□ -0.49
CXCL12-208	ENST00000496375	ZNF696	Q9H7X3	374 aa		11.96	□□□□□ -0.49
CXCL12-208	ENST00000496375	BRD7	Q9NPI1	651 aa		11.96	□□□□□ -0.49
CXCL12-208	ENST00000496375	ACOXL	Q9NUZ1	547 aa		11.96	□□□□□ -0.49
CXCL12-208	ENST00000496375	ERVK13-1	Q9NX77	482 aa		11.96	□□□□□ -0.49
CXCL12-208	ENST00000496375	DIMT1	Q9UNQ2	313 aa	Known RBP	11.96	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms