RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 HIST1H2AAQ96QV6 131 aa13.02□□□□□ -0.33
HDAC4-213ENST00000496347 IL4I1Q96RQ9 567 aa13.02□□□□□ -0.33
HDAC4-213ENST00000496347 RBM4BQ9BQ04 359 aaKnown RBP13.02□□□□□ -0.33
HDAC4-213ENST00000496347 PCGF1Q9BSM1 259 aa13.02□□□□□ -0.33
HDAC4-213ENST00000496347 TTTY10Q9BZA0 68 aa13.02□□□□□ -0.33
HDAC4-213ENST00000496347 FGF23Q9GZV9 251 aaPredicted RBP13.02□□□□□ -0.33
HDAC4-213ENST00000496347 DNAJB11Q9UBS4 358 aa13.02□□□□□ -0.33
HDAC4-213ENST00000496347 ENPP5Q9UJA9 477 aa13.02□□□□□ -0.33
HDAC4-213ENST00000496347 RPUSD1Q9UJJ7 312 aaKnown RBP13.02□□□□□ -0.33
HDAC4-213ENST00000496347 R4GMQ9 66 aa13.02□□□□□ -0.33
HDAC4-213ENST00000496347 SRSF10O75494 262 aaKnown RBP13.01□□□□□ -0.33
HDAC4-213ENST00000496347 FCN3O75636 299 aa13.01□□□□□ -0.33
HDAC4-213ENST00000496347 SFTPBP07988 381 aa13.01□□□□□ -0.33
HDAC4-213ENST00000496347 HTR1FP30939 366 aa13.01□□□□□ -0.33
HDAC4-213ENST00000496347 GPM6AP51674 278 aa13.01□□□□□ -0.33
HDAC4-213ENST00000496347 PDCD1Q15116 288 aa13.01□□□□□ -0.33
HDAC4-213ENST00000496347 AWAT1Q58HT5 328 aa13.01□□□□□ -0.33
HDAC4-213ENST00000496347 LRRC10Q5BKY1 277 aa13.01□□□□□ -0.33
HDAC4-213ENST00000496347 ATPAF1Q5TC12 328 aaPredicted RBP13.01□□□□□ -0.33
HDAC4-213ENST00000496347 BTN2A1Q7KYR7 527 aa13.01□□□□□ -0.33
HDAC4-213ENST00000496347 BCDIN3DQ7Z5W3 292 aaKnown RBP13.01□□□□□ -0.33
HDAC4-213ENST00000496347 FAM216BQ8N7L0 139 aa13.01□□□□□ -0.33
HDAC4-213ENST00000496347 C3orf56Q8N813 242 aa13.01□□□□□ -0.33
HDAC4-213ENST00000496347 OR8J1Q8NGP2 316 aa13.01□□□□□ -0.33
HDAC4-213ENST00000496347 FAM71F1Q96KD3 344 aaPredicted RBP13.01□□□□□ -0.33
HDAC4-213ENST00000496347 TBX15Q96SF7 602 aa13.01□□□□□ -0.33
HDAC4-213ENST00000496347 SIRPDQ9H106 197 aa13.01□□□□□ -0.33
HDAC4-213ENST00000496347 PRDM13Q9H4Q3 707 aa13.01□□□□□ -0.33
HDAC4-213ENST00000496347 KPTNQ9Y664 436 aa13.01□□□□□ -0.33
HDAC4-213ENST00000496347 TTRP02766 147 aa13□□□□□ -0.33
HDAC4-213ENST00000496347 HKR1P10072 659 aa13□□□□□ -0.33
HDAC4-213ENST00000496347 FAHP16930 419 aa13□□□□□ -0.33
HDAC4-213ENST00000496347 FOXL1Q12952 345 aa13□□□□□ -0.33
HDAC4-213ENST00000496347 TMED1Q13445 227 aa13□□□□□ -0.33
HDAC4-213ENST00000496347 SLC9A3R2Q15599 337 aa13□□□□□ -0.33
HDAC4-213ENST00000496347 CDONQ4KMG0 1287 aa13□□□□□ -0.33
HDAC4-213ENST00000496347 PLCXD3Q63HM9 321 aa13□□□□□ -0.33
HDAC4-213ENST00000496347 ZFP1Q6P2D0 407 aa13□□□□□ -0.33
HDAC4-213ENST00000496347 BRD3OSQ6XYD6 125 aa13□□□□□ -0.33
HDAC4-213ENST00000496347 KIR3DL3Q8N743 410 aa13□□□□□ -0.33
HDAC4-213ENST00000496347 OR51G2Q8NGK0 314 aa13□□□□□ -0.33
HDAC4-213ENST00000496347 GATAD2BQ8WXI9 593 aa13□□□□□ -0.33
HDAC4-213ENST00000496347 RFKQ969G6 155 aa13□□□□□ -0.33
HDAC4-213ENST00000496347 DUX5Q96PT3 197 aa13□□□□□ -0.33
HDAC4-213ENST00000496347 CCL13Q99616 98 aa13□□□□□ -0.33
HDAC4-213ENST00000496347 SEMA6AQ9H2E6 1030 aa13□□□□□ -0.33
HDAC4-213ENST00000496347 OR51I2Q9H344 312 aa13□□□□□ -0.33
HDAC4-213ENST00000496347 RIBC2Q9H4K1 309 aa13□□□□□ -0.33
HDAC4-213ENST00000496347 NOX4Q9NPH5 578 aa13□□□□□ -0.33
HDAC4-213ENST00000496347 PIGLQ9Y2B2 252 aa13□□□□□ -0.33
HDAC4-213ENST00000496347 SNX5Q9Y5X3 404 aa13□□□□□ -0.33
HDAC4-213ENST00000496347 A0A1B0GVI7 797 aa12.99□□□□□ -0.33
HDAC4-213ENST00000496347 A0A1B0GW55 424 aa12.99□□□□□ -0.33
HDAC4-213ENST00000496347 ZNF732B4DXR9 585 aa12.99□□□□□ -0.33
HDAC4-213ENST00000496347 NDUFB3O43676 98 aa12.99□□□□□ -0.33
HDAC4-213ENST00000496347 KRT8P05787 483 aa12.99□□□□□ -0.33
HDAC4-213ENST00000496347 DUX4L2P0CJ85 424 aa12.99□□□□□ -0.33
HDAC4-213ENST00000496347 DUX4L3P0CJ86 424 aa12.99□□□□□ -0.33
HDAC4-213ENST00000496347 DUX4L4P0CJ87 422 aa12.99□□□□□ -0.33
HDAC4-213ENST00000496347 DUX4L5P0CJ88 424 aa12.99□□□□□ -0.33
HDAC4-213ENST00000496347 DUX4L6P0CJ89 424 aa12.99□□□□□ -0.33
HDAC4-213ENST00000496347 DUX4L7P0CJ90 424 aa12.99□□□□□ -0.33
HDAC4-213ENST00000496347 CDC42P60953 191 aa12.99□□□□□ -0.33
HDAC4-213ENST00000496347 IL13RA1P78552 427 aa12.99□□□□□ -0.33
HDAC4-213ENST00000496347 CEP78Q5JTW2 689 aa12.99□□□□□ -0.33
HDAC4-213ENST00000496347 TMEM42Q69YG0 159 aa12.99□□□□□ -0.33
HDAC4-213ENST00000496347 DUX4L9Q6RFH8 374 aaPredicted RBP12.99□□□□□ -0.33
HDAC4-213ENST00000496347 ELMOD2Q8IZ81 293 aa12.99□□□□□ -0.33
HDAC4-213ENST00000496347 CMTM4Q8IZR5 234 aa12.99□□□□□ -0.33
HDAC4-213ENST00000496347 LY6G5BQ8NDX9 201 aa12.99□□□□□ -0.33
HDAC4-213ENST00000496347 OR5A2Q8NGI9 324 aa12.99□□□□□ -0.33
HDAC4-213ENST00000496347 ANGPTL6Q8NI99 470 aa12.99□□□□□ -0.33
HDAC4-213ENST00000496347 C8orf46Q8TAG6 207 aa12.99□□□□□ -0.33
HDAC4-213ENST00000496347 PYDC1Q8WXC3 89 aa12.99□□□□□ -0.33
HDAC4-213ENST00000496347 WDR13Q9H1Z4 485 aa12.99□□□□□ -0.33
HDAC4-213ENST00000496347 RASSF4Q9H2L5 321 aa12.99□□□□□ -0.33
HDAC4-213ENST00000496347 NLKQ9UBE8 527 aa12.99□□□□□ -0.33
HDAC4-213ENST00000496347 DUX4Q9UBX2 424 aa12.99□□□□□ -0.33
HDAC4-213ENST00000496347 MRM2Q9UI43 246 aaKnown RBP12.99□□□□□ -0.33
HDAC4-213ENST00000496347 OR52A1Q9UKL2 312 aa12.99□□□□□ -0.33
HDAC4-213ENST00000496347 GTF2A1LQ9UNN4 478 aa12.99□□□□□ -0.33
HDAC4-213ENST00000496347 IGHV1-69DA0A0B4J2H0 117 aa12.98□□□□□ -0.33
HDAC4-213ENST00000496347 SAC3D1A6NKF1 404 aa12.98□□□□□ -0.33
HDAC4-213ENST00000496347 SIGLEC5O15389 551 aa12.98□□□□□ -0.33
HDAC4-213ENST00000496347 AKR7A2O43488 359 aa12.98□□□□□ -0.33
HDAC4-213ENST00000496347 SULT1C4O75897 302 aa12.98□□□□□ -0.33
HDAC4-213ENST00000496347 IGHV1-69P01742 117 aa12.98□□□□□ -0.33
HDAC4-213ENST00000496347 ALPLP05186 524 aa12.98□□□□□ -0.33
HDAC4-213ENST00000496347 OR2T7P0C7T2 308 aa12.98□□□□□ -0.33
HDAC4-213ENST00000496347 CCL1P22362 96 aa12.98□□□□□ -0.33
HDAC4-213ENST00000496347 TGM4P49221 684 aa12.98□□□□□ -0.33
HDAC4-213ENST00000496347 IKZF1Q13422 519 aa12.98□□□□□ -0.33
HDAC4-213ENST00000496347 DEFB112Q30KQ8 113 aa12.98□□□□□ -0.33
HDAC4-213ENST00000496347 SMIM21Q3B7S5 101 aa12.98□□□□□ -0.33
HDAC4-213ENST00000496347 ZNF684Q5T5D7 378 aa12.98□□□□□ -0.33
HDAC4-213ENST00000496347 ZNF788Q6ZQV5 615 aa12.98□□□□□ -0.33
HDAC4-213ENST00000496347 Q6ZSR3 168 aa12.98□□□□□ -0.33
HDAC4-213ENST00000496347 TMEM86BQ8N661 226 aa12.98□□□□□ -0.33
HDAC4-213ENST00000496347 OR2T27Q8NH04 317 aa12.98□□□□□ -0.33
HDAC4-213ENST00000496347 ZNF671Q8TAW3 534 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms