RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-208ENST00000495777 LIMS4P0CW20 117 aa7.35□□□□□ -1.23
SORT1-208ENST00000495777 MDKP21741 143 aaPredicted RBP7.35□□□□□ -1.23
SORT1-208ENST00000495777 PSMA1P25786 263 aaKnown RBP7.35□□□□□ -1.23
SORT1-208ENST00000495777 CCR9P51686 369 aa7.35□□□□□ -1.23
SORT1-208ENST00000495777 ZNF85Q03923 595 aa7.35□□□□□ -1.23
SORT1-208ENST00000495777 GPR50Q13585 617 aa7.35□□□□□ -1.23
SORT1-208ENST00000495777 SPHARQ15513 63 aa7.35□□□□□ -1.23
SORT1-208ENST00000495777 KRTAP27-1Q3LI81 207 aa7.35□□□□□ -1.23
SORT1-208ENST00000495777 MIDNQ504T8 468 aa7.35□□□□□ -1.23
SORT1-208ENST00000495777 ZNF684Q5T5D7 378 aa7.35□□□□□ -1.23
SORT1-208ENST00000495777 FDX2Q6P4F2 183 aa7.35□□□□□ -1.23
SORT1-208ENST00000495777 C16orf87Q6PH81 154 aa7.35□□□□□ -1.23
SORT1-208ENST00000495777 CORO6Q6QEF8 472 aa7.35□□□□□ -1.23
SORT1-208ENST00000495777 LRRN1Q6UXK5 716 aa7.35□□□□□ -1.23
SORT1-208ENST00000495777 ZNF367Q7RTV3 350 aa7.35□□□□□ -1.23
SORT1-208ENST00000495777 FTMTQ8N4E7 242 aa7.35□□□□□ -1.23
SORT1-208ENST00000495777 NANOGP1Q8N7R0 232 aa7.35□□□□□ -1.23
SORT1-208ENST00000495777 TSPAN14Q8NG11 270 aa7.35□□□□□ -1.23
SORT1-208ENST00000495777 ITLN1Q8WWA0 313 aa7.35□□□□□ -1.23
SORT1-208ENST00000495777 TAF15Q92804 592 aaKnown RBP eCLIP7.35□□□□□ -1.23
SORT1-208ENST00000495777 TMIGD2Q96BF3 282 aa7.35□□□□□ -1.23
SORT1-208ENST00000495777 C4orf36Q96KX1 117 aa7.35□□□□□ -1.23
SORT1-208ENST00000495777 OR2V2Q96R30 315 aa7.35□□□□□ -1.23
SORT1-208ENST00000495777 SSBP3Q9BWW4 388 aaPredicted RBP7.35□□□□□ -1.23
SORT1-208ENST00000495777 MS4A7Q9GZW8 240 aaPredicted RBP7.35□□□□□ -1.23
SORT1-208ENST00000495777 GCM1Q9NP62 436 aa7.35□□□□□ -1.23
SORT1-208ENST00000495777 GNG8Q9UK08 70 aa7.35□□□□□ -1.23
SORT1-208ENST00000495777 STARD10Q9Y365 291 aa7.35□□□□□ -1.23
SORT1-208ENST00000495777 LRP12Q9Y561 859 aa7.35□□□□□ -1.23
SORT1-208ENST00000495777 SOX21Q9Y651 276 aaPredicted RBP7.35□□□□□ -1.23
SORT1-208ENST00000495777 R4GMQ9 66 aa7.35□□□□□ -1.23
SORT1-208ENST00000495777 ARHGAP32A7KAX9 2087 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 IGHV2-70DA0A0C4DH43 119 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 A0A0U1RQV5 110 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 A0A1B0GUS0 222 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 TMEM269A0A1B0GVZ9 245 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 A0A1B0GWJ7 208 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 TMEM212A6NML5 194 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 DHRS7CA6NNS2 312 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 F5H5K5 113 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 LOC110117498-PIK3R3F6TDL0 507 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 MTRF1O75570 445 aaKnown RBP7.34□□□□□ -1.23
SORT1-208ENST00000495777 APOL3O95236 402 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 CD1AP06126 327 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 HTR1AP08908 422 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 UBCP0CG48 685 aaKnown RBP7.34□□□□□ -1.23
SORT1-208ENST00000495777 RAC2P15153 192 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 ATP6V1B1P15313 513 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 C21orf33P30042 268 aaPredicted RBP7.34□□□□□ -1.23
SORT1-208ENST00000495777 RPS27P42677 84 aaKnown RBP7.34□□□□□ -1.23
SORT1-208ENST00000495777 CX3CR1P49238 355 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 MLLT11Q13015 90 aaPredicted RBP7.34□□□□□ -1.23
SORT1-208ENST00000495777 MALLQ13021 153 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 IRF3Q14653 427 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 TRAM1Q15629 374 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 ZNF181Q2M3W8 571 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 RPL22L1Q6P5R6 122 aaKnown RBP7.34□□□□□ -1.23
SORT1-208ENST00000495777 LHFPL3Q86UP9 236 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 KLBQ86Z14 1044 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 OR10S1Q8NGN2 331 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 WFDC12Q8WWY7 111 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 RAB40AQ8WXH6 277 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 RORBQ92753 470 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 CMBLQ96DG6 245 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 TBX5Q99593 518 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 MRPS26Q9BYN8 205 aaKnown RBP7.34□□□□□ -1.23
SORT1-208ENST00000495777 COMMD4Q9H0A8 199 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 OR10A2Q9H208 303 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 TMEM165Q9HC07 324 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 PAK1IP1Q9NWT1 392 aaPredicted RBP7.34□□□□□ -1.23
SORT1-208ENST00000495777 BABAM2Q9NXR7 383 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 NUFIP1Q9UHK0 495 aaKnown RBP7.34□□□□□ -1.23
SORT1-208ENST00000495777 COPS3Q9UNS2 423 aa7.34□□□□□ -1.23
SORT1-208ENST00000495777 IGHV3OR16-10A0A075B7F0 116 aa7.33□□□□□ -1.24
SORT1-208ENST00000495777 TRAV40A0A0B4J280 105 aa7.33□□□□□ -1.24
SORT1-208ENST00000495777 KIR2DS1A0A191URI9 304 aa7.33□□□□□ -1.24
SORT1-208ENST00000495777 MDFIC2A0A1B0GVS7 189 aa7.33□□□□□ -1.24
SORT1-208ENST00000495777 TRIM64CA6NLI5 447 aa7.33□□□□□ -1.24
SORT1-208ENST00000495777 SRRM5B3KS81 715 aa7.33□□□□□ -1.24
SORT1-208ENST00000495777 J3QLW9 94 aa7.33□□□□□ -1.24
SORT1-208ENST00000495777 HOXA3O43365 443 aaPredicted RBP7.33□□□□□ -1.24
SORT1-208ENST00000495777 MT-ND2P03891 347 aa7.33□□□□□ -1.24
SORT1-208ENST00000495777 ISG15P05161 165 aa7.33□□□□□ -1.24
SORT1-208ENST00000495777 ACSM4P0C7M7 580 aa7.33□□□□□ -1.24
SORT1-208ENST00000495777 RPS2P15880 293 aaKnown RBP7.33□□□□□ -1.24
SORT1-208ENST00000495777 SELEP16581 610 aa7.33□□□□□ -1.24
SORT1-208ENST00000495777 ZNF19P17023 458 aa7.33□□□□□ -1.24
SORT1-208ENST00000495777 DDOSTP39656 456 aa7.33□□□□□ -1.24
SORT1-208ENST00000495777 ETV1P50549 477 aa7.33□□□□□ -1.24
SORT1-208ENST00000495777 BPIFB3P59826 476 aa7.33□□□□□ -1.24
SORT1-208ENST00000495777 MED22Q15528 200 aa7.33□□□□□ -1.24
SORT1-208ENST00000495777 DEFB112Q30KQ8 113 aa7.33□□□□□ -1.24
SORT1-208ENST00000495777 ZNF404Q494X3 552 aa7.33□□□□□ -1.24
SORT1-208ENST00000495777 BCL2L15Q5TBC7 163 aa7.33□□□□□ -1.24
SORT1-208ENST00000495777 TMEM244Q5VVB8 128 aa7.33□□□□□ -1.24
SORT1-208ENST00000495777 UBE2UQ5VVX9 321 aa7.33□□□□□ -1.24
SORT1-208ENST00000495777 BTNL3Q6UXE8 466 aa7.33□□□□□ -1.24
SORT1-208ENST00000495777 FBXW12Q6X9E4 464 aa7.33□□□□□ -1.24
SORT1-208ENST00000495777 COLCA1Q6ZS62 124 aa7.33□□□□□ -1.24
SORT1-208ENST00000495777 SPATC1Q76KD6 591 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms