RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 SNAP25P60880 206 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 RPS23P62266 143 aaKnown RBP2.6□□□□□ -1.99
SMC4-224ENST00000494612 SEMG2Q02383 582 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 LOXL1Q08397 574 aaPredicted RBP2.6□□□□□ -1.99
SMC4-224ENST00000494612 MOBPQ13875 183 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 C16orf72Q14CZ0 275 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 ABCA11PQ4W5N1 156 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 HIKESHIQ53FT3 197 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 PLCXD3Q63HM9 321 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 NPWQ8N729 165 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 COX18Q8N8Q8 333 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 TMEM105Q8N8V8 129 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 ZNF709Q8N972 641 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 C15orf40Q8WUR7 153 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 C8orf44Q96CB5 159 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 FLYWCH2Q96CP2 140 aaKnown RBP2.6□□□□□ -1.99
SMC4-224ENST00000494612 XPO6Q96QU8 1125 aaKnown RBP2.6□□□□□ -1.99
SMC4-224ENST00000494612 PARP12Q9H0J9 701 aaKnown RBP2.6□□□□□ -1.99
SMC4-224ENST00000494612 BLZF1Q9H2G9 400 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 TMEM38AQ9H6F2 299 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 TMEM165Q9HC07 324 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 MRM3Q9HC36 420 aaKnown RBP2.6□□□□□ -1.99
SMC4-224ENST00000494612 SIRT7Q9NRC8 400 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 AHSPQ9NZD4 102 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 MTCH1Q9NZJ7 389 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 VPS13AQ96RL7 3174 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 TET1Q8NFU7 2136 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 DNAH14Q0VDD8 3507 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 TECTAO75443 2155 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 IGLV1-50A0A075B6I6 118 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 SMIM26A0A096LP01 95 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 TRAV25A0A0B4J276 109 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 TMEM223A0PJW6 202 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 C5orf63A6NC05 138 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 ZNF705GA8MUZ8 300 aaPredicted RBP2.59□□□□□ -1.99
SMC4-224ENST00000494612 C5orf67F2Z3F1 127 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 CDC40O60508 579 aaKnown RBP eCLIP2.59□□□□□ -1.99
SMC4-224ENST00000494612 GCM2O75603 506 aaPredicted RBP2.59□□□□□ -1.99
SMC4-224ENST00000494612 S100A9P06702 114 aaKnown RBP2.59□□□□□ -1.99
SMC4-224ENST00000494612 ZNF286BP0CG31 522 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 CD37P11049 281 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 TCP1P17987 556 aaKnown RBP2.59□□□□□ -1.99
SMC4-224ENST00000494612 ATF6P18850 670 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 IL32P24001 234 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 SLC11A1P49279 550 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 ETV1P50549 477 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 CCNG1P51959 295 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 CLDN8P56748 225 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 SPAG1Q07617 926 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 QPRTQ15274 297 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 IRF4Q15306 451 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 TPTE2P1Q5T6R2 138 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 UBE2UQ5VVX9 321 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 C16orf87Q6PH81 154 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 NPSR1Q6W5P4 371 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 MBOAT2Q6ZWT7 520 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 SCD5Q86SK9 330 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 WDR86Q86TI4 376 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 WDFY1Q8IWB7 410 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 UBALD2Q8IYN6 164 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 MICU2Q8IYU8 434 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 OTUD6BQ8N6M0 293 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 OR11H7Q8NGC8 314 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 OR4K5Q8NGD3 323 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 OR52E5Q8NH55 327 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 TOP1MTQ969P6 601 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 FOXC2Q99958 501 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 ZYG11BQ9C0D3 744 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 TMEM14AQ9Y6G1 99 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 LCTP09848 1927 aa2.59□□□□□ -1.99
SMC4-224ENST00000494612 ADGRA3Q8IWK6 1321 aa2.59□□□□□ -2
SMC4-224ENST00000494612 DMXL1Q9Y485 3027 aa2.59□□□□□ -2
SMC4-224ENST00000494612 MYH7BA7E2Y1 1941 aa2.58□□□□□ -2
SMC4-224ENST00000494612 TRAV19A0A0A6YYK7 116 aa2.58□□□□□ -2
SMC4-224ENST00000494612 IGKV1-8A0A0C4DH67 115 aa2.58□□□□□ -2
SMC4-224ENST00000494612 LRCOL1A6NCL2 159 aa2.58□□□□□ -2
SMC4-224ENST00000494612 SYCE1LA8MT33 242 aa2.58□□□□□ -2
SMC4-224ENST00000494612 WISP3O95389 354 aaPredicted RBP2.58□□□□□ -2
SMC4-224ENST00000494612 APCSP02743 223 aa2.58□□□□□ -2
SMC4-224ENST00000494612 TUBG1P23258 451 aa2.58□□□□□ -2
SMC4-224ENST00000494612 PMELP40967 661 aa2.58□□□□□ -2
SMC4-224ENST00000494612 SERPINB8P50452 374 aa2.58□□□□□ -2
SMC4-224ENST00000494612 CYP24A1Q07973 514 aa2.58□□□□□ -2
SMC4-224ENST00000494612 ANGPT1Q15389 498 aa2.58□□□□□ -2
SMC4-224ENST00000494612 RBMY1FQ15415 496 aaKnown RBP2.58□□□□□ -2
SMC4-224ENST00000494612 HSDL1Q3SXM5 330 aa2.58□□□□□ -2
SMC4-224ENST00000494612 AADACL4Q5VUY2 407 aa2.58□□□□□ -2
SMC4-224ENST00000494612 SNX20Q7Z614 316 aa2.58□□□□□ -2
SMC4-224ENST00000494612 VTCN1Q7Z7D3 282 aa2.58□□□□□ -2
SMC4-224ENST00000494612 NKAIN4Q8IVV8 208 aa2.58□□□□□ -2
SMC4-224ENST00000494612 ARRDC1Q8N5I2 433 aa2.58□□□□□ -2
SMC4-224ENST00000494612 ZNF461Q8TAF7 563 aa2.58□□□□□ -2
SMC4-224ENST00000494612 GPX8Q8TED1 209 aa2.58□□□□□ -2
SMC4-224ENST00000494612 GALNT14Q96FL9 552 aa2.58□□□□□ -2
SMC4-224ENST00000494612 ZNF488Q96MN9 340 aa2.58□□□□□ -2
SMC4-224ENST00000494612 HSD17B10Q99714 261 aaKnown RBP2.58□□□□□ -2
SMC4-224ENST00000494612 SIKE1Q9BRV8 207 aa2.58□□□□□ -2
SMC4-224ENST00000494612 OR52D1Q9H346 318 aa2.58□□□□□ -2
SMC4-224ENST00000494612 RGCCQ9H4X1 137 aa2.58□□□□□ -2
SMC4-224ENST00000494612 LZTFL1Q9NQ48 299 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms