RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 PLPPR5Q32ZL2 321 aa10.26□□□□□ -0.77
BRCA1-222ENST00000493919 RABL3Q5HYI8 236 aa10.26□□□□□ -0.77
BRCA1-222ENST00000493919 TCTEX1D4Q5JR98 221 aa10.26□□□□□ -0.77
BRCA1-222ENST00000493919 CD300LDQ6UXZ3 194 aa10.26□□□□□ -0.77
BRCA1-222ENST00000493919 CYP2R1Q6VVX0 501 aa10.26□□□□□ -0.77
BRCA1-222ENST00000493919 DGAT2L6Q6ZPD8 337 aa10.26□□□□□ -0.77
BRCA1-222ENST00000493919 LARP4Q71RC2 724 aaKnown RBP eCLIP10.26□□□□□ -0.77
BRCA1-222ENST00000493919 SERPINA11Q86U17 422 aa10.26□□□□□ -0.77
BRCA1-222ENST00000493919 SLC2A12Q8TD20 617 aa10.26□□□□□ -0.77
BRCA1-222ENST00000493919 PTPMT1Q8WUK0 201 aaPredicted RBP10.26□□□□□ -0.77
BRCA1-222ENST00000493919 NTNG2Q96CW9 530 aa10.26□□□□□ -0.77
BRCA1-222ENST00000493919 RAX2Q96IS3 184 aa10.26□□□□□ -0.77
BRCA1-222ENST00000493919 RTN4RQ9BZR6 473 aa10.26□□□□□ -0.77
BRCA1-222ENST00000493919 TLNRD1Q9H1K6 362 aa10.26□□□□□ -0.77
BRCA1-222ENST00000493919 ZNF552Q9H707 407 aaPredicted RBP10.26□□□□□ -0.77
BRCA1-222ENST00000493919 TMEM185BQ9H7F4 350 aa10.26□□□□□ -0.77
BRCA1-222ENST00000493919 AKTIPQ9H8T0 292 aa10.26□□□□□ -0.77
BRCA1-222ENST00000493919 PLEKHA2Q9HB19 425 aa10.26□□□□□ -0.77
BRCA1-222ENST00000493919 CBLN4Q9NTU7 201 aa10.26□□□□□ -0.77
BRCA1-222ENST00000493919 CES1P1Q9UKY3 287 aa10.26□□□□□ -0.77
BRCA1-222ENST00000493919 AMDHD2Q9Y303 409 aa10.26□□□□□ -0.77
BRCA1-222ENST00000493919 PRORSD1PA6NEY8 169 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 FAAHO00519 579 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 ZNF432O94892 652 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 GZMBP10144 247 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 HSD17B1P14061 328 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 NID1P14543 1247 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 SELEP16581 610 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 CPT2P23786 658 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 ZBTB25P24278 435 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 SHC1P29353 583 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 CSNK1A1P48729 337 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 NDUFA6P56556 154 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 PGGHGQ32M88 737 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 PDLIM3Q53GG5 364 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-222ENST00000493919 PRR27Q6MZM9 219 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 ZNF546Q86UE3 836 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 APCDD1LQ8NCL9 501 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 NFAM1Q8NET5 270 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-222ENST00000493919 OR7G2Q8NG99 324 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 SUN3Q8TAQ9 357 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 TMEM45BQ96B21 275 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 CNRIP1Q96F85 164 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-222ENST00000493919 GALNT14Q96FL9 552 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 SLC35E1Q96K37 410 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 CLCC1Q96S66 551 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 ADAT1Q9BUB4 502 aaKnown RBP10.25□□□□□ -0.77
BRCA1-222ENST00000493919 SLC25A18Q9H1K4 315 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 MEAF6Q9HAF1 191 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 NOX3Q9HBY0 568 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 PRRC2CQ9Y520 2896 aaKnown RBP10.25□□□□□ -0.77
BRCA1-222ENST00000493919 CFAP46Q8IYW2 2715 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 LOC100130705A0A1B0GUX0 176 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 ANKRD20A5PA0PJZ0 165 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 RNF212BA8MTL3 300 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 SDHDO14521 159 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 OR6A2O95222 327 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 MT-CO2P00403 227 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 CSF1P09603 554 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 DUSP2Q05923 314 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 TPBGQ13641 420 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 IFI44LQ53G44 452 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 ABHD17BQ5VST6 288 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 C8orf82Q6P1X6 216 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-222ENST00000493919 LAX1Q8IWV1 398 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 LRRC25Q8N386 305 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-222ENST00000493919 SLC5A8Q8N695 610 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 OR14K1Q8NGZ2 314 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 OR5AK3PQ8NH89 298 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 PSMF1Q92530 271 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 ITCHQ96J02 903 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 MBOAT4Q96T53 435 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 DEFB126Q9BYW3 111 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 SEC61A2Q9H9S3 476 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 FN3KRPQ9HA64 309 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 FLVCR1Q9Y5Y0 555 aa10.25□□□□□ -0.77
BRCA1-222ENST00000493919 M0QZ24 198 aa10.24□□□□□ -0.77
BRCA1-222ENST00000493919 FAM20BO75063 409 aa10.24□□□□□ -0.77
BRCA1-222ENST00000493919 AMBPP02760 352 aa10.24□□□□□ -0.77
BRCA1-222ENST00000493919 PRB1P04280 392 aa10.24□□□□□ -0.77
BRCA1-222ENST00000493919 CXCL3P19876 107 aa10.24□□□□□ -0.77
BRCA1-222ENST00000493919 NFYBP25208 207 aa10.24□□□□□ -0.77
BRCA1-222ENST00000493919 NTSP30990 170 aa10.24□□□□□ -0.77
BRCA1-222ENST00000493919 DIO3P55073 304 aa10.24□□□□□ -0.77
BRCA1-222ENST00000493919 SEC61A1P61619 476 aaKnown RBP10.24□□□□□ -0.77
BRCA1-222ENST00000493919 PMPCAQ10713 525 aa10.24□□□□□ -0.77
BRCA1-222ENST00000493919 MAPK14Q16539 360 aa10.24□□□□□ -0.77
BRCA1-222ENST00000493919 ALKBH6Q3KRA9 238 aa10.24□□□□□ -0.77
BRCA1-222ENST00000493919 CRB2Q5IJ48 1285 aa10.24□□□□□ -0.77
BRCA1-222ENST00000493919 SPIN3Q5JUX0 258 aa10.24□□□□□ -0.77
BRCA1-222ENST00000493919 OR2G6Q5TZ20 316 aa10.24□□□□□ -0.77
BRCA1-222ENST00000493919 IL34Q6ZMJ4 242 aa10.24□□□□□ -0.77
BRCA1-222ENST00000493919 SLC35E3Q7Z769 313 aa10.24□□□□□ -0.77
BRCA1-222ENST00000493919 LRRTM1Q86UE6 522 aa10.24□□□□□ -0.77
BRCA1-222ENST00000493919 RTN4RL2Q86UN3 420 aa10.24□□□□□ -0.77
BRCA1-222ENST00000493919 ZDHHC21Q8IVQ6 265 aa10.24□□□□□ -0.77
BRCA1-222ENST00000493919 SPICQ8N5J4 248 aa10.24□□□□□ -0.77
BRCA1-222ENST00000493919 NECAP1Q8NC96 275 aa10.24□□□□□ -0.77
BRCA1-222ENST00000493919 MORN4Q8NDC4 146 aa10.24□□□□□ -0.77
BRCA1-222ENST00000493919 ATP6V1C2Q8NEY4 427 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms