RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 LINC00303Q3SY05 128 aa1.73□□□□□ -2.13
SMC4-223ENST00000493695 HIKESHIQ53FT3 197 aa1.73□□□□□ -2.13
SMC4-223ENST00000493695 FAM104BQ5XKR9 115 aa1.73□□□□□ -2.13
SMC4-223ENST00000493695 MED27Q6P2C8 311 aa1.73□□□□□ -2.13
SMC4-223ENST00000493695 ANGPTL8Q6UXH0 198 aa1.73□□□□□ -2.13
SMC4-223ENST00000493695 ORMDL3Q8N138 153 aa1.73□□□□□ -2.13
SMC4-223ENST00000493695 OR2Z1Q8NG97 314 aa1.73□□□□□ -2.13
SMC4-223ENST00000493695 OR5M1Q8NGP8 315 aa1.73□□□□□ -2.13
SMC4-223ENST00000493695 RXFP2Q8WXD0 754 aa1.73□□□□□ -2.13
SMC4-223ENST00000493695 IL22Q9GZX6 179 aa1.73□□□□□ -2.13
SMC4-223ENST00000493695 OR2AG1Q9H205 316 aa1.73□□□□□ -2.13
SMC4-223ENST00000493695 CRLF2Q9HC73 371 aa1.73□□□□□ -2.13
SMC4-223ENST00000493695 DYRK4Q9NR20 520 aa1.73□□□□□ -2.13
SMC4-223ENST00000493695 CA10Q9NS85 328 aa1.73□□□□□ -2.13
SMC4-223ENST00000493695 SBNO1A3KN83 1393 aa1.72□□□□□ -2.13
SMC4-223ENST00000493695 RPRD2Q5VT52 1461 aaKnown RBP1.72□□□□□ -2.13
SMC4-223ENST00000493695 ZNF701M0R085 212 aaPredicted RBP1.72□□□□□ -2.13
SMC4-223ENST00000493695 TRDMT1O14717 391 aaKnown RBP1.72□□□□□ -2.13
SMC4-223ENST00000493695 SLC19A2O60779 497 aa1.72□□□□□ -2.13
SMC4-223ENST00000493695 HSBP1O75506 76 aa1.72□□□□□ -2.13
SMC4-223ENST00000493695 SCO1O75880 301 aa1.72□□□□□ -2.13
SMC4-223ENST00000493695 TTC4O95801 387 aa1.72□□□□□ -2.13
SMC4-223ENST00000493695 IGKV1-39P01597 117 aa1.72□□□□□ -2.13
SMC4-223ENST00000493695 IGKV1D-39P04432 117 aa1.72□□□□□ -2.13
SMC4-223ENST00000493695 SRMP19623 302 aa1.72□□□□□ -2.13
SMC4-223ENST00000493695 PRSS3P35030 304 aa1.72□□□□□ -2.13
SMC4-223ENST00000493695 YWHAEP62258 255 aaKnown RBP1.72□□□□□ -2.13
SMC4-223ENST00000493695 RBX1P62877 108 aa1.72□□□□□ -2.13
SMC4-223ENST00000493695 TSC22D1Q15714 1073 aa1.72□□□□□ -2.13
SMC4-223ENST00000493695 ULK3Q6PHR2 472 aa1.72□□□□□ -2.13
SMC4-223ENST00000493695 TBPL2Q6SJ96 375 aa1.72□□□□□ -2.13
SMC4-223ENST00000493695 TMEM136Q6ZRR5 245 aa1.72□□□□□ -2.13
SMC4-223ENST00000493695 Q6ZSR6 202 aa1.72□□□□□ -2.13
SMC4-223ENST00000493695 SLC35D2Q76EJ3 337 aa1.72□□□□□ -2.13
SMC4-223ENST00000493695 RNF10Q8N5U6 811 aaKnown RBP1.72□□□□□ -2.13
SMC4-223ENST00000493695 TRAM1L1Q8N609 369 aa1.72□□□□□ -2.13
SMC4-223ENST00000493695 WDR31Q8NA23 367 aa1.72□□□□□ -2.13
SMC4-223ENST00000493695 C1orf64Q8NEQ6 169 aa1.72□□□□□ -2.13
SMC4-223ENST00000493695 OR1P1Q8NH06 330 aa1.72□□□□□ -2.13
SMC4-223ENST00000493695 SFXN5Q8TD22 340 aa1.72□□□□□ -2.13
SMC4-223ENST00000493695 GPR82Q96P67 336 aa1.72□□□□□ -2.13
SMC4-223ENST00000493695 ALS2CR12Q96Q35 445 aa1.72□□□□□ -2.13
SMC4-223ENST00000493695 NAPGQ99747 312 aaPredicted RBP1.72□□□□□ -2.13
SMC4-223ENST00000493695 ZNF649Q9BS31 505 aa1.72□□□□□ -2.13
SMC4-223ENST00000493695 C1orf50Q9BV19 199 aa1.72□□□□□ -2.13
SMC4-223ENST00000493695 TAS2R5Q9NYW4 299 aa1.72□□□□□ -2.13
SMC4-223ENST00000493695 LTBP4Q8N2S1 1624 aa1.72□□□□□ -2.13
SMC4-223ENST00000493695 SHANK1Q9Y566 2161 aa1.71□□□□□ -2.14
SMC4-223ENST00000493695 ARPC4-TTLL3A0A0A6YYG9 625 aa1.71□□□□□ -2.14
SMC4-223ENST00000493695 A8MWL6 223 aa1.71□□□□□ -2.14
SMC4-223ENST00000493695 HACD1B0YJ81 288 aa1.71□□□□□ -2.14
SMC4-223ENST00000493695 PRAMEF26H0Y7S4 382 aa1.71□□□□□ -2.14
SMC4-223ENST00000493695 MFNGO00587 321 aa1.71□□□□□ -2.14
SMC4-223ENST00000493695 MMP7P09237 267 aaPredicted RBP1.71□□□□□ -2.14
SMC4-223ENST00000493695 INAFM2P0DMQ5 153 aa1.71□□□□□ -2.14
SMC4-223ENST00000493695 CD28P10747 220 aa1.71□□□□□ -2.14
SMC4-223ENST00000493695 CSKP41240 450 aa1.71□□□□□ -2.14
SMC4-223ENST00000493695 LCN2P80188 198 aa1.71□□□□□ -2.14
SMC4-223ENST00000493695 FLI1Q01543 452 aaPredicted RBP1.71□□□□□ -2.14
SMC4-223ENST00000493695 FBXL19-AS1Q494R0 122 aa1.71□□□□□ -2.14
SMC4-223ENST00000493695 OR2W3Q7Z3T1 314 aa1.71□□□□□ -2.14
SMC4-223ENST00000493695 SLC30A8Q8IWU4 369 aa1.71□□□□□ -2.14
SMC4-223ENST00000493695 OR4M2Q8NGB6 313 aa1.71□□□□□ -2.14
SMC4-223ENST00000493695 TMEM234Q8WY98 164 aa1.71□□□□□ -2.14
SMC4-223ENST00000493695 OR8D1Q8WZ84 308 aa1.71□□□□□ -2.14
SMC4-223ENST00000493695 TOP1MTQ969P6 601 aa1.71□□□□□ -2.14
SMC4-223ENST00000493695 CERS2Q96G23 380 aa1.71□□□□□ -2.14
SMC4-223ENST00000493695 MRPL48Q96GC5 212 aaKnown RBP1.71□□□□□ -2.14
SMC4-223ENST00000493695 SNF8Q96H20 258 aa1.71□□□□□ -2.14
SMC4-223ENST00000493695 ZBED3Q96IU2 234 aaPredicted RBP1.71□□□□□ -2.14
SMC4-223ENST00000493695 TMEM175Q9BSA9 504 aa1.71□□□□□ -2.14
SMC4-223ENST00000493695 MARVELD1Q9BSK0 173 aa1.71□□□□□ -2.14
SMC4-223ENST00000493695 ANGPTL4Q9BY76 406 aa1.71□□□□□ -2.14
SMC4-223ENST00000493695 ARV1Q9H2C2 271 aa1.71□□□□□ -2.14
SMC4-223ENST00000493695 BLZF1Q9H2G9 400 aa1.71□□□□□ -2.14
SMC4-223ENST00000493695 TDRD3Q9H7E2 651 aaKnown RBP1.71□□□□□ -2.14
SMC4-223ENST00000493695 RABL2AQ9UBK7 228 aaPredicted RBP1.71□□□□□ -2.14
SMC4-223ENST00000493695 DDX19BQ9UMR2 479 aa1.71□□□□□ -2.14
SMC4-223ENST00000493695 KLF12Q9Y4X4 402 aa1.71□□□□□ -2.14
SMC4-223ENST00000493695 MUC6Q6W4X9 2439 aa1.7□□□□□ -2.14
SMC4-223ENST00000493695 IGHV2OR16-5A0A0B4J2B6 119 aa1.7□□□□□ -2.14
SMC4-223ENST00000493695 TMEM72A0PK05 275 aa1.7□□□□□ -2.14
SMC4-223ENST00000493695 SNAI1O95863 264 aaPredicted RBP1.7□□□□□ -2.14
SMC4-223ENST00000493695 MAS1P04201 325 aa1.7□□□□□ -2.14
SMC4-223ENST00000493695 PMCHP20382 165 aa1.7□□□□□ -2.14
SMC4-223ENST00000493695 MSR1P21757 451 aa1.7□□□□□ -2.14
SMC4-223ENST00000493695 GABRR2P28476 465 aa1.7□□□□□ -2.14
SMC4-223ENST00000493695 PEX19P40855 299 aa1.7□□□□□ -2.14
SMC4-223ENST00000493695 PPP1CAP62136 330 aa1.7□□□□□ -2.14
SMC4-223ENST00000493695 RPS11P62280 158 aaKnown RBP eCLIP1.7□□□□□ -2.14
SMC4-223ENST00000493695 BTN1A1Q13410 526 aa1.7□□□□□ -2.14
SMC4-223ENST00000493695 ZNF235Q14590 738 aa1.7□□□□□ -2.14
SMC4-223ENST00000493695 TMEM69Q5SWH9 247 aa1.7□□□□□ -2.14
SMC4-223ENST00000493695 ZNF678Q5SXM1 525 aa1.7□□□□□ -2.14
SMC4-223ENST00000493695 ZFAND6Q6FIF0 208 aa1.7□□□□□ -2.14
SMC4-223ENST00000493695 ASCL4Q6XD76 172 aa1.7□□□□□ -2.14
SMC4-223ENST00000493695 ZCCHC24Q8N2G6 241 aaKnown RBP1.7□□□□□ -2.14
SMC4-223ENST00000493695 OR2M7Q8NG81 312 aa1.7□□□□□ -2.14
SMC4-223ENST00000493695 OR1S1Q8NH92 325 aa1.7□□□□□ -2.14
SMC4-223ENST00000493695 PIH1D2Q8WWB5 315 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms