RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 MICAQ29983 383 aa14.17□□□□□ -0.14
COL9A1-210ENST00000493682 BEAN1Q3B7T3 259 aa14.17□□□□□ -0.14
COL9A1-210ENST00000493682 SPATS1Q496A3 300 aa14.17□□□□□ -0.14
COL9A1-210ENST00000493682 DEFB107AQ8IZN7 70 aa14.17□□□□□ -0.14
COL9A1-210ENST00000493682 PIGCQ92535 297 aa14.17□□□□□ -0.14
COL9A1-210ENST00000493682 OTULINQ96BN8 352 aa14.17□□□□□ -0.14
COL9A1-210ENST00000493682 AJUBAQ96IF1 538 aa14.17□□□□□ -0.14
COL9A1-210ENST00000493682 LYZL4Q96KX0 146 aa14.17□□□□□ -0.14
COL9A1-210ENST00000493682 SSX3Q99909 188 aa14.17□□□□□ -0.14
COL9A1-210ENST00000493682 ELL3Q9HB65 397 aaPredicted RBP14.17□□□□□ -0.14
COL9A1-210ENST00000493682 MED4Q9NPJ6 270 aa14.17□□□□□ -0.14
COL9A1-210ENST00000493682 ARL8BQ9NVJ2 186 aa14.17□□□□□ -0.14
COL9A1-210ENST00000493682 NLKQ9UBE8 527 aa14.17□□□□□ -0.14
COL9A1-210ENST00000493682 SF3B6Q9Y3B4 125 aaKnown RBP14.17□□□□□ -0.14
COL9A1-210ENST00000493682 U3KQV3 271 aa14.17□□□□□ -0.14
COL9A1-210ENST00000493682 SNX3O60493 162 aa14.16□□□□□ -0.14
COL9A1-210ENST00000493682 GLCEO94923 617 aa14.16□□□□□ -0.14
COL9A1-210ENST00000493682 OPN1MWP04001 364 aa14.16□□□□□ -0.14
COL9A1-210ENST00000493682 OPN1MW2P0DN77 364 aa14.16□□□□□ -0.14
COL9A1-210ENST00000493682 OPN1MW3P0DN78 364 aa14.16□□□□□ -0.14
COL9A1-210ENST00000493682 KIR2DS4P43632 304 aa14.16□□□□□ -0.14
COL9A1-210ENST00000493682 GABRA2P47869 451 aa14.16□□□□□ -0.14
COL9A1-210ENST00000493682 FBLN7Q53RD9 439 aa14.16□□□□□ -0.14
COL9A1-210ENST00000493682 HIST2H2BDQ6DRA6 164 aa14.16□□□□□ -0.14
COL9A1-210ENST00000493682 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.16□□□□□ -0.14
COL9A1-210ENST00000493682 IQCF1Q8N6M8 205 aa14.16□□□□□ -0.14
COL9A1-210ENST00000493682 RORBQ92753 470 aa14.16□□□□□ -0.14
COL9A1-210ENST00000493682 FAM234AQ9H0X4 552 aa14.16□□□□□ -0.14
COL9A1-210ENST00000493682 ACTR3BQ9P1U1 418 aa14.16□□□□□ -0.14
COL9A1-210ENST00000493682 TAGLN3Q9UI15 199 aa14.16□□□□□ -0.14
COL9A1-210ENST00000493682 FOXJ3Q9UPW0 622 aa14.16□□□□□ -0.14
COL9A1-210ENST00000493682 SAMHD1Q9Y3Z3 626 aaKnown RBP14.16□□□□□ -0.14
COL9A1-210ENST00000493682 MAB21L2Q9Y586 359 aa14.16□□□□□ -0.14
COL9A1-210ENST00000493682 IGKV1D-17A0A075B6S4 117 aa14.15□□□□□ -0.14
COL9A1-210ENST00000493682 H0YAE9 185 aa14.15□□□□□ -0.14
COL9A1-210ENST00000493682 ANGPTL7O43827 346 aa14.15□□□□□ -0.14
COL9A1-210ENST00000493682 RHBDL1O75783 438 aa14.15□□□□□ -0.14
COL9A1-210ENST00000493682 LYNP07948 512 aa14.15□□□□□ -0.14
COL9A1-210ENST00000493682 PSG2P11465 335 aa14.15□□□□□ -0.14
COL9A1-210ENST00000493682 GPM6AP51674 278 aa14.15□□□□□ -0.14
COL9A1-210ENST00000493682 LY6EQ16553 131 aa14.15□□□□□ -0.14
COL9A1-210ENST00000493682 KPRPQ5T749 579 aaPredicted RBP14.15□□□□□ -0.14
COL9A1-210ENST00000493682 C11orf88Q6PI97 169 aa14.15□□□□□ -0.14
COL9A1-210ENST00000493682 C16orf89Q6UX73 402 aa14.15□□□□□ -0.14
COL9A1-210ENST00000493682 CPLX4Q7Z7G2 160 aa14.15□□□□□ -0.14
COL9A1-210ENST00000493682 ZDHHC23Q8IYP9 409 aa14.15□□□□□ -0.14
COL9A1-210ENST00000493682 C11orf44Q8N8P7 122 aa14.15□□□□□ -0.14
COL9A1-210ENST00000493682 ZNRF1Q8ND25 227 aa14.15□□□□□ -0.14
COL9A1-210ENST00000493682 OR51G2Q8NGK0 314 aa14.15□□□□□ -0.14
COL9A1-210ENST00000493682 OR5D13Q8NGL4 314 aa14.15□□□□□ -0.14
COL9A1-210ENST00000493682 OR4C13Q8NGP0 309 aa14.15□□□□□ -0.14
COL9A1-210ENST00000493682 OTOSQ8NHW6 89 aa14.15□□□□□ -0.14
COL9A1-210ENST00000493682 THEM6Q8WUY1 208 aa14.15□□□□□ -0.14
COL9A1-210ENST00000493682 CFHR4Q92496 578 aa14.15□□□□□ -0.14
COL9A1-210ENST00000493682 NIPSNAP1Q9BPW8 284 aa14.15□□□□□ -0.14
COL9A1-210ENST00000493682 OR51V1Q9H2C8 321 aa14.15□□□□□ -0.14
COL9A1-210ENST00000493682 MAGIXQ9H6Y5 334 aa14.15□□□□□ -0.14
COL9A1-210ENST00000493682 REEP1Q9H902 201 aa14.15□□□□□ -0.14
COL9A1-210ENST00000493682 TCRBV5S2A0A599 114 aa14.14□□□□□ -0.15
COL9A1-210ENST00000493682 GLRA1P23415 457 aa14.14□□□□□ -0.15
COL9A1-210ENST00000493682 LRRC75BQ2VPJ9 315 aa14.14□□□□□ -0.15
COL9A1-210ENST00000493682 SAMD5Q5TGI4 173 aa14.14□□□□□ -0.15
COL9A1-210ENST00000493682 OR2T5Q6IEZ7 315 aa14.14□□□□□ -0.15
COL9A1-210ENST00000493682 CRIP3Q6Q6R5 217 aa14.14□□□□□ -0.15
COL9A1-210ENST00000493682 CD300LDQ6UXZ3 194 aa14.14□□□□□ -0.15
COL9A1-210ENST00000493682 FAM185AQ8N0U4 392 aa14.14□□□□□ -0.15
COL9A1-210ENST00000493682 PAPD5Q8NDF8 572 aaKnown RBP14.14□□□□□ -0.15
COL9A1-210ENST00000493682 TMEM185AQ8NFB2 350 aa14.14□□□□□ -0.15
COL9A1-210ENST00000493682 OR8B12Q8NGG6 310 aa14.14□□□□□ -0.15
COL9A1-210ENST00000493682 OR2T29Q8NH02 315 aa14.14□□□□□ -0.15
COL9A1-210ENST00000493682 TEX47Q8TBZ9 253 aa14.14□□□□□ -0.15
COL9A1-210ENST00000493682 HIST1H2AAQ96QV6 131 aa14.14□□□□□ -0.15
COL9A1-210ENST00000493682 MEGF9Q9H1U4 602 aa14.14□□□□□ -0.15
COL9A1-210ENST00000493682 OR51I2Q9H344 312 aa14.14□□□□□ -0.15
COL9A1-210ENST00000493682 NDE1Q9NXR1 346 aa14.14□□□□□ -0.15
COL9A1-210ENST00000493682 ZNF222Q9UK12 451 aa14.14□□□□□ -0.15
COL9A1-210ENST00000493682 TRBV23-1A0A0A0MS06 115 aa14.13□□□□□ -0.15
COL9A1-210ENST00000493682 ZNF732B4DXR9 585 aa14.13□□□□□ -0.15
COL9A1-210ENST00000493682 H3BN98 237 aa14.13□□□□□ -0.15
COL9A1-210ENST00000493682 SELENOFO60613 162 aa14.13□□□□□ -0.15
COL9A1-210ENST00000493682 PRB2P02812 416 aaPredicted RBP14.13□□□□□ -0.15
COL9A1-210ENST00000493682 PAX6P26367 422 aa14.13□□□□□ -0.15
COL9A1-210ENST00000493682 PSMA6P60900 246 aaKnown RBP14.13□□□□□ -0.15
COL9A1-210ENST00000493682 AANATQ16613 207 aa14.13□□□□□ -0.15
COL9A1-210ENST00000493682 MKXQ8IYA7 352 aa14.13□□□□□ -0.15
COL9A1-210ENST00000493682 KLHDC1Q8N7A1 406 aa14.13□□□□□ -0.15
COL9A1-210ENST00000493682 OR10G2Q8NGC3 310 aa14.13□□□□□ -0.15
COL9A1-210ENST00000493682 OR2T6Q8NHC8 308 aa14.13□□□□□ -0.15
COL9A1-210ENST00000493682 RANBP3Q9H6Z4 567 aaPredicted RBP14.13□□□□□ -0.15
COL9A1-210ENST00000493682 YY1AP1Q9H869 796 aa14.13□□□□□ -0.15
COL9A1-210ENST00000493682 C19orf12Q9NSK7 152 aa14.13□□□□□ -0.15
COL9A1-210ENST00000493682 TAS2R1Q9NYW7 299 aa14.13□□□□□ -0.15
COL9A1-210ENST00000493682 KLHDC2Q9Y2U9 406 aa14.13□□□□□ -0.15
COL9A1-210ENST00000493682 PAICSP22234 425 aaKnown RBP14.12□□□□□ -0.15
COL9A1-210ENST00000493682 GNG3P63215 75 aa14.12□□□□□ -0.15
COL9A1-210ENST00000493682 CEACAM21Q3KPI0 293 aa14.12□□□□□ -0.15
COL9A1-210ENST00000493682 CEP78Q5JTW2 689 aa14.12□□□□□ -0.15
COL9A1-210ENST00000493682 PLBD1Q6P4A8 553 aa14.12□□□□□ -0.15
COL9A1-210ENST00000493682 Q6ZPA2 131 aa14.12□□□□□ -0.15
COL9A1-210ENST00000493682 KRT74Q7RTS7 529 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms