RNA–Protein interactions for RNA: ENST00000493662.6

MSH5-SAPCD1-207, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene MSH5-SAPCD1, Length 3,991 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-207ENST00000493662 ATRXP46100 2492 aa9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 DDAH2O95865 285 aa9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 CSNK1A1P48729 337 aa9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 CAV2P51636 162 aa9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 STARD6P59095 220 aa9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 DHRS2Q13268 280 aa9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 OPN5Q6U736 354 aa9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 TGIF2LXQ8IUE1 241 aa9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 MVB12AQ96EY5 273 aa9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 TSPAN32Q96QS1 320 aa9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 DEFB127Q9H1M4 99 aa9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 B9D1Q9UPM9 204 aa9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 LRRK1Q38SD2 2015 aa9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 FAM230AA0A1W2PPH8 454 aa9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 TNFSF11O14788 317 aa9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 CXCL13O43927 109 aa9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 DVL1P1P54792 670 aaPredicted RBP9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 C3AR1Q16581 482 aa9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 GLYATL3Q5SZD4 288 aa9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 GPR157Q5UAW9 335 aa9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 GGNBP1Q5YKI7 109 aa9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 H1FNTQ75WM6 255 aaPredicted RBP9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 TRAPPC6BQ86SZ2 158 aa9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 GPR137CQ8N3F9 429 aa9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 DTD1Q8TEA8 209 aa9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 ZNF721Q8TF20 911 aa9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 FRZBQ92765 325 aa9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 SARGQ9BW04 601 aa9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 GDF2Q9UK05 429 aaPredicted RBP9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 ACAD8Q9UKU7 415 aa9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 RBM7Q9Y580 266 aaKnown RBP9.58□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 HSPB6O14558 160 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 GSK3AP49840 483 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 CHRFAM7AQ494W8 412 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 FHL5Q5TD97 284 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 CD200R1LQ6Q8B3 271 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 TIPARPQ7Z3E1 657 aaKnown RBP9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 EIF4E3Q8N5X7 224 aaKnown RBP9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 CLEC1AQ8NC01 280 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 GUCD1Q96NT3 240 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 VPS25Q9BRG1 176 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 ESPL1Q14674 2120 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 PRR14LQ5THK1 2151 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 SPAARA0A1B0GVQ0 90 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 CLN5O75503 358 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 GLI4P10075 376 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 CRABP1P29762 137 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 RPL29P47914 159 aaKnown RBP9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 H2BFSP57053 126 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 DOC2BQ14184 412 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 DEFB124Q8NES8 71 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 APOBEC4Q8WW27 367 aaKnown RBP9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 RASL10BQ96S79 203 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 MTFP1Q9UDX5 166 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 ZNF230Q9UIE0 474 aaPredicted RBP9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 TINAGQ9UJW2 476 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 FOXJ3Q9UPW0 622 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 GAB2Q9UQC2 676 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 CHD8Q9HCK8 2581 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 A0A1W2PPE2 198 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 MEGF11A6BM72 1044 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 PNLIPRP2P54317 469 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 GUK1Q16774 197 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 RABEPKQ7Z6M1 372 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 MISPQ8IVT2 679 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 LAT2Q9GZY6 243 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 BANF2Q9H503 90 aa9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 METTL1Q9UBP6 276 aaKnown RBP9.57□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 MEX3AA1L020 520 aaKnown RBP9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 OR6C76A6NM76 312 aa9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 SLC33A1O00400 549 aaPredicted RBP9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 CTDSPLO15194 276 aa9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 IGHG1P01857 330 aa9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 CCL3P10147 92 aa9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 IAH1Q2TAA2 248 aaPredicted RBP9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 ATP1A1-AS1Q5TC04 95 aa9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 CNEP1R1Q8N9A8 125 aa9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 CTHRC1Q96CG8 243 aa9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 AMELYQ99218 206 aa9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 MRPL22Q9NWU5 206 aaKnown RBP9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 IL17BQ9UHF5 180 aa9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 CACNA1BQ00975 2339 aa9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 PRSS37A4D1T9 235 aa9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 CSTBP04080 98 aaKnown RBP9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 TMEM225BP0DP42 221 aa9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 VSIG10L2P0DP72 767 aa9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 TAS2R60P59551 318 aa9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 ZNF85Q03923 595 aa9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 MESTQ5EB52 335 aa9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 REC114Q7Z4M0 266 aa9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 ZNF100Q8IYN0 542 aa9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 C1orf87Q8N0U7 546 aa9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 OR51E1Q8TCB6 317 aa9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 SAP25Q8TEE9 199 aa9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 PIGTQ969N2 578 aa9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 SPACA9Q96E40 222 aaPredicted RBP9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 UCN2Q96RP3 112 aa9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 RAB33BQ9H082 229 aa9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 SLCO5A1Q9H2Y9 848 aa9.56□□□□□ -0.88
MSH5-SAPCD1-207ENST00000493662 NPDC1Q9NQX5 325 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms