RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 SPOCK3Q9BQ16 436 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 LIPGQ9Y5X9 500 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 COL4A6Q14031 1691 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 TLCD2A6NGC4 264 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 GEMIN2O14893 280 aaKnown RBP10.34□□□□□ -0.75
HDAC4-210ENST00000493582 ISG15P05161 165 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 CTSBP07858 339 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 SNU13P55769 128 aaKnown RBP10.34□□□□□ -0.75
HDAC4-210ENST00000493582 NFATC4Q14934 902 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 SP6Q3SY56 376 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 C1orf140Q5VVS0 124 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 CYB561D1Q8N8Q1 229 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 OR6X1Q8NH79 312 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 OR5R1Q8NH85 324 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 C16orf52Q8NHV5 167 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 FLVCR1-AS1Q8TAF5 88 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 RERGQ96A58 199 aaPredicted RBP10.34□□□□□ -0.75
HDAC4-210ENST00000493582 KIR3DX1Q9H7L2 352 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 FAM86C1Q9NVL1 165 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 PPP1R14DQ9NXH3 145 aa10.34□□□□□ -0.75
HDAC4-210ENST00000493582 A8MVM7 634 aa10.33□□□□□ -0.76
HDAC4-210ENST00000493582 BGLAPP02818 100 aa10.33□□□□□ -0.76
HDAC4-210ENST00000493582 CSF2RAP15509 400 aa10.33□□□□□ -0.76
HDAC4-210ENST00000493582 CXCR1P25024 350 aa10.33□□□□□ -0.76
HDAC4-210ENST00000493582 CEACAM6P40199 344 aa10.33□□□□□ -0.76
HDAC4-210ENST00000493582 ZFP62Q8NB50 900 aaPredicted RBP10.33□□□□□ -0.76
HDAC4-210ENST00000493582 OR9A4Q8NGU2 314 aa10.33□□□□□ -0.76
HDAC4-210ENST00000493582 HPSE2Q8WWQ2 592 aa10.33□□□□□ -0.76
HDAC4-210ENST00000493582 RAB24Q969Q5 203 aa10.33□□□□□ -0.76
HDAC4-210ENST00000493582 FAM210BQ96KR6 192 aa10.33□□□□□ -0.76
HDAC4-210ENST00000493582 PLEKHA2Q9HB19 425 aa10.33□□□□□ -0.76
HDAC4-210ENST00000493582 TUBD1Q9UJT1 453 aa10.33□□□□□ -0.76
HDAC4-210ENST00000493582 RTTNQ86VV8 2226 aa10.33□□□□□ -0.76
HDAC4-210ENST00000493582 HCRTR1O43613 425 aa10.33□□□□□ -0.76
HDAC4-210ENST00000493582 IL18BPO95998 194 aa10.33□□□□□ -0.76
HDAC4-210ENST00000493582 FGF7P21781 194 aa10.33□□□□□ -0.76
HDAC4-210ENST00000493582 JOSD1Q15040 202 aaPredicted RBP10.33□□□□□ -0.76
HDAC4-210ENST00000493582 AGBL4Q5VU57 503 aa10.33□□□□□ -0.76
HDAC4-210ENST00000493582 VITQ6UXI7 678 aa10.33□□□□□ -0.76
HDAC4-210ENST00000493582 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.33□□□□□ -0.76
HDAC4-210ENST00000493582 SGPP2Q8IWX5 399 aa10.33□□□□□ -0.76
HDAC4-210ENST00000493582 CCL4L1Q8NHW4 92 aa10.33□□□□□ -0.76
HDAC4-210ENST00000493582 DDA1Q9BW61 102 aa10.33□□□□□ -0.76
HDAC4-210ENST00000493582 FOXD3Q9UJU5 478 aaPredicted RBP10.33□□□□□ -0.76
HDAC4-210ENST00000493582 C14orf166Q9Y224 244 aaKnown RBP10.33□□□□□ -0.76
HDAC4-210ENST00000493582 STRAPQ9Y3F4 350 aaKnown RBP10.33□□□□□ -0.76
HDAC4-210ENST00000493582 MANSC4A6NHS7 340 aaPredicted RBP10.32□□□□□ -0.76
HDAC4-210ENST00000493582 SCAF4O95104 1147 aaKnown RBP10.32□□□□□ -0.76
HDAC4-210ENST00000493582 IFNA21P01568 189 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 CHRM2P08172 466 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 SRP19P09132 144 aaKnown RBP10.32□□□□□ -0.76
HDAC4-210ENST00000493582 ZNF25P17030 456 aaPredicted RBP10.32□□□□□ -0.76
HDAC4-210ENST00000493582 OR3A4PP47883 348 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 GLIPR1P48060 266 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 PCP4P48539 62 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 SUCLG1P53597 346 aaKnown RBP10.32□□□□□ -0.76
HDAC4-210ENST00000493582 RPL27P61353 136 aaKnown RBP10.32□□□□□ -0.76
HDAC4-210ENST00000493582 LANCL3Q6ZV70 420 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 WFIKKN2Q8TEU8 576 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 EMG1Q92979 244 aaKnown RBP10.32□□□□□ -0.76
HDAC4-210ENST00000493582 ZFYVE21Q9BQ24 234 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 SIRT7Q9NRC8 400 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 RNF186Q9NXI6 227 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 A0A087WWC5 75 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 E5RGE8 158 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 K7N7A8 449 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 ZNF205O95201 554 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 GSTP1P09211 210 aaKnown RBP10.32□□□□□ -0.76
HDAC4-210ENST00000493582 CD200P41217 278 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 RAB38P57729 211 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 GLO1Q04760 184 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 FMODQ06828 376 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 TMEM176BQ3YBM2 270 aaPredicted RBP10.32□□□□□ -0.76
HDAC4-210ENST00000493582 C17orf78Q8N4C9 275 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 SNHG12Q9BXW3 62 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 HDAC8Q9BY41 377 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 METTL9Q9H1A3 318 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 FGF22Q9HCT0 170 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 MRPS28Q9Y2Q9 187 aaKnown RBP10.32□□□□□ -0.76
HDAC4-210ENST00000493582 NSG2Q9Y328 171 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 LINC01553A4QN01 128 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 PRR19A6NJB7 356 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 CRTAPO75718 401 aaPredicted RBP10.32□□□□□ -0.76
HDAC4-210ENST00000493582 SCGNO76038 276 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 MBP02144 154 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 SLC22A25Q6T423 547 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 LFNGQ8NES3 379 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 OR5D14Q8NGL3 314 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 TVP23CQ96ET8 276 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 RTN4RQ9BZR6 473 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 ZNF700Q9H0M5 742 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 S1PR5Q9H228 398 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 ANAPC10Q9UM13 185 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 CYP8B1Q9UNU6 501 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 PIAS3Q9Y6X2 628 aa10.32□□□□□ -0.76
HDAC4-210ENST00000493582 IGKV1D-8A0A087WSZ0 117 aa10.31□□□□□ -0.76
HDAC4-210ENST00000493582 CCDC187A0A096LP49 1063 aa10.31□□□□□ -0.76
HDAC4-210ENST00000493582 GPR89AB7ZAQ6 455 aa10.31□□□□□ -0.76
HDAC4-210ENST00000493582 FTCDNL1E5RQL4 147 aa10.31□□□□□ -0.76
HDAC4-210ENST00000493582 STMND1H3BQB6 276 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms