RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 MOB1AQ9H8S9 216 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 CHODLQ9H9P2 273 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 TMEM100Q9NV29 134 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 PTTG3PQ9NZH4 202 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 AASSQ9UDR5 926 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 CDC42EP3Q9UKI2 254 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 FZR1Q9UM11 496 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 NOP16Q9Y3C1 178 aaKnown RBP5.68□□□□□ -1.5
VPS52-219ENST00000493379 SNX5Q9Y5X3 404 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 R4GMQ9 66 aa5.68□□□□□ -1.5
VPS52-219ENST00000493379 IGHV4-30-2A0A087WSY4 118 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 A0A1W2PPW3 197 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 PLSCR5A0PG75 271 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 IRGMA1A4Y4 181 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 TNFRSF13BO14836 293 aaPredicted RBP5.67□□□□□ -1.5
VPS52-219ENST00000493379 RRP9O43818 475 aaKnown RBP5.67□□□□□ -1.5
VPS52-219ENST00000493379 TIMM8AO60220 97 aaPredicted RBP5.67□□□□□ -1.5
VPS52-219ENST00000493379 SSX4O60224 188 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 RPSAP08865 295 aaKnown RBP5.67□□□□□ -1.5
VPS52-219ENST00000493379 MRPL3P09001 348 aaKnown RBP5.67□□□□□ -1.5
VPS52-219ENST00000493379 LIMS3P0CW19 117 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 LIMS4P0CW20 117 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 SLC2A1P11166 492 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 DAOP14920 347 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 TNFRSF1AP19438 455 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 MYF6P23409 242 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 ACKR3P25106 362 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 NR4A2P43354 598 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 MAGEB1P43366 347 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 SLC6A9P48067 706 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 HSPA13P48723 471 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 TGM4P49221 684 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 AQP4P55087 323 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 CCL8P80075 99 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 MRPL28Q13084 256 aaKnown RBP5.67□□□□□ -1.5
VPS52-219ENST00000493379 SMN1Q16637 294 aaKnown RBP5.67□□□□□ -1.5
VPS52-219ENST00000493379 ZNF829Q3KNS6 432 aaPredicted RBP5.67□□□□□ -1.5
VPS52-219ENST00000493379 CHRFAM7AQ494W8 412 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 CCDC58Q4VC31 144 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 PRR31Q5SQ13 230 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 C6orf141Q5SZD1 244 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 FAM57BQ71RH2 274 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 CATSPERDQ86XM0 798 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 C8orf59Q8N0T1 100 aaPredicted RBP5.67□□□□□ -1.5
VPS52-219ENST00000493379 ZNF525Q8N782 197 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 CSNK2A3Q8NEV1 391 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 OR52I1Q8NGK6 324 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 CNIH3Q8TBE1 160 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 SNX33Q8WV41 574 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 GTF3AQ92664 365 aaKnown RBP5.67□□□□□ -1.5
VPS52-219ENST00000493379 GGHQ92820 318 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 YIPF5Q969M3 257 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 C10orf35Q96D05 121 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 PELI1Q96FA3 418 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 REEP6Q96HR9 211 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 ARPC5LQ9BPX5 153 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 REG4Q9BYZ8 158 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 PBOV1Q9GZY1 135 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 TLNRD1Q9H1K6 362 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 VCX3BQ9H321 246 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 OR51B6Q9H340 312 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 DUSP21Q9H596 190 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 MSL2Q9HCI7 577 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 GCM1Q9NP62 436 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 ABCB9Q9NP78 766 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 DYNLRB1Q9NP97 96 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 PSORS1C1Q9UIG5 152 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 DIMT1Q9UNQ2 313 aaKnown RBP5.67□□□□□ -1.5
VPS52-219ENST00000493379 MYRFQ9Y2G1 1151 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 MPC1Q9Y5U8 109 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 V9GYS6 101 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 CR1P17927 2039 aa5.67□□□□□ -1.5
VPS52-219ENST00000493379 IGHV1-69-2A0A0G2JMI3 117 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 DAPL1A0PJW8 107 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 EFCAB10A6NFE3 127 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 H0YHG0 523 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 H0YL77 283 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 MAGEB4O15481 346 aaPredicted RBP5.66□□□□□ -1.5
VPS52-219ENST00000493379 OGG1O15527 345 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 DENRO43583 198 aaKnown RBP5.66□□□□□ -1.5
VPS52-219ENST00000493379 LY6HO94772 140 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 LHBP01229 141 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 KRT8P05787 483 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 CD1AP06126 327 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 ACAA1P09110 424 aaPredicted RBP5.66□□□□□ -1.5
VPS52-219ENST00000493379 CCDC159P0C7I6 412 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 JUNBP17275 347 aaPredicted RBP5.66□□□□□ -1.5
VPS52-219ENST00000493379 ATP6V1E1P36543 226 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 PMELP40967 661 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 OR12D2P58182 307 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 ACTA2P62736 377 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 ACTG2P63267 376 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 IL5RAQ01344 420 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 MFGE8Q08431 387 aaPredicted RBP5.66□□□□□ -1.5
VPS52-219ENST00000493379 ACSM1Q08AH1 577 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 CNN3Q15417 329 aaKnown RBP5.66□□□□□ -1.5
VPS52-219ENST00000493379 SPRNQ5BIV9 151 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 C19orf54Q5BKX5 351 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 CLEC2AQ6UVW9 174 aa5.66□□□□□ -1.5
VPS52-219ENST00000493379 C12orf54Q6X4T0 127 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms