RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 PACRGLQ8N7B6 248 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 ZNF485Q8NCK3 441 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 B3GALNT2Q8NCR0 500 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 DUSP18Q8NEJ0 188 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 OR5M9Q8NGP3 310 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 OR5M3Q8NGP4 307 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 OR9I1Q8NGQ6 314 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 XAGE5Q8WWM1 108 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 ARL11Q969Q4 196 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 RCN3Q96D15 328 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 DYNLL2Q96FJ2 89 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 CCDC115Q96NT0 180 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 NODALQ96S42 347 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 CLCC1Q96S66 551 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 ZNF649Q9BS31 505 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 TMEM121Q9BTD3 319 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 C20orf85Q9H1P6 137 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 RNF167Q9H6Y7 350 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 RNF122Q9H9V4 155 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 EFCAB1Q9HAE3 211 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 PLSCR3Q9NRY6 295 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 MED29Q9NX70 200 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 FLRT3Q9NZU0 649 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 LOXL2Q9Y4K0 774 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 SNX10Q9Y5X0 201 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 FYCO1Q9BQS8 1478 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 DENND4AQ7Z401 1863 aa3.62□□□□□ -1.83
BRCA1-220ENST00000492859 CTTNBP2Q8WZ74 1663 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 FANCD2Q9BXW9 1451 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 A0A1W2PP64 1363 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 A0A0G2JNJ9 132 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 A0A0J9YY10 115 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 A0A1B0GX78 115 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 TMEM218A2RU14 115 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 CEACAM18A8MTB9 384 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 F5H5K5 113 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 K7ERI5 159 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 PRYO14603 147 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 CRXO43186 299 aaPredicted RBP3.61□□□□□ -1.83
BRCA1-220ENST00000492859 MLNRO43193 412 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 GCM2O75603 506 aaPredicted RBP3.61□□□□□ -1.83
BRCA1-220ENST00000492859 C1RP00736 705 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 CD8AP01732 235 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 HBE1P02100 147 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 AMBPP02760 352 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 FABP3P05413 133 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 IL7P13232 177 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 CD59P13987 128 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 ACRV1P26436 265 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 CD34P28906 385 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 GLRBP48167 497 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 EMDP50402 254 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 GZMMP51124 257 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 SNRPD1P62314 119 aaKnown RBP3.61□□□□□ -1.83
BRCA1-220ENST00000492859 DGCR2P98153 550 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 CDK6Q00534 326 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 CAV1Q03135 178 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 TGFBR3Q03167 851 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 SRSF4Q08170 494 aaKnown RBP3.61□□□□□ -1.83
BRCA1-220ENST00000492859 RAB40BQ12829 278 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 GPR50Q13585 617 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 GINS1Q14691 196 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 TRIP6Q15654 476 aaKnown RBP3.61□□□□□ -1.83
BRCA1-220ENST00000492859 PLK5Q496M5 336 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 UNC50Q53HI1 259 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 COL5A1-AS1Q5SY13 56 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 DCST2Q5T1A1 773 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 C1orf194Q5T5A4 169 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 TPTE2P1Q5T6R2 138 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 HBMQ6B0K9 141 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 GLYATQ6IB77 296 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 ZNF343Q6P1L6 599 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 LEG1Q6P5S2 330 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 AGTRAPQ6RW13 159 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 GSG1LQ6UXU4 331 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 TMEM64Q6YI46 380 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 LINC00299Q6ZSB3 139 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 C1QL4Q86Z23 238 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 OR4N5Q8IXE1 308 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 OR2L13Q8N349 312 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 ARRDC2Q8TBH0 407 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 LRRC58Q96CX6 371 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 DIRAS2Q96HU8 199 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 LINC00477Q96M19 166 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 ZNF681Q96N22 645 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 LINC00052Q96N35 136 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 ZNF347Q96SE7 839 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 FAM173AQ9BQD7 235 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 NIPSNAP3BQ9BS92 247 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 FAAP24Q9BTP7 215 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 DUSP23Q9BVJ7 150 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 EBPLQ9BY08 206 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 TMEM126AQ9H061 195 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 LPAR5Q9H1C0 372 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 TAS2R16Q9NYV7 291 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 KLHL13Q9P2N7 655 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 Q9UF83 564 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 Q9UFV3 132 aa3.61□□□□□ -1.83
BRCA1-220ENST00000492859 YTHDC2Q9H6S0 1430 aaKnown RBP3.61□□□□□ -1.83
BRCA1-220ENST00000492859 CKAP5Q14008 2032 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms