RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 GSCP56915 257 aaPredicted RBP4.82□□□□□ -1.64
FN1-224ENST00000492816 RELQ04864 619 aaPredicted RBP4.82□□□□□ -1.64
FN1-224ENST00000492816 SRSF4Q08170 494 aaKnown RBP4.82□□□□□ -1.64
FN1-224ENST00000492816 ALKBH1Q13686 389 aaKnown RBP4.82□□□□□ -1.64
FN1-224ENST00000492816 UGT8Q16880 541 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 SOHLH1Q5JUK2 328 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 RNF141Q8WVD5 230 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 RNASE6Q93091 150 aaKnown RBP4.82□□□□□ -1.64
FN1-224ENST00000492816 OR2M2Q96R28 347 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 SLX4Q8IY92 1834 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 A0A1W2PR80 420 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 TRAPPC2P0DI81 140 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 TRAPPC2BP0DI82 140 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 ARAFP10398 606 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 CHRNB1P11230 501 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 DAOP14920 347 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 HNRNPFP52597 415 aaKnown RBP4.82□□□□□ -1.64
FN1-224ENST00000492816 RAC3P60763 192 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 LYZP61626 148 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 OR8I2Q8N0Y5 310 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 OR6M1Q8NGM8 313 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 ABHD14AQ9BUJ0 271 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 C11orf54Q9H0W9 315 aaPredicted RBP4.82□□□□□ -1.64
FN1-224ENST00000492816 SIRT4Q9Y6E7 314 aaPredicted RBP4.82□□□□□ -1.64
FN1-224ENST00000492816 M0QZK8 103 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 ZNF354AO60765 605 aaPredicted RBP4.82□□□□□ -1.64
FN1-224ENST00000492816 FOXF1Q12946 379 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 FAM26EQ8N5C1 309 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 SLC38A9Q8NBW4 561 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 OR13A1Q8NGR1 328 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 C16orf92Q96LL3 132 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 TXNIPQ9H3M7 391 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 CCL4P13236 92 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 ADRA2CP18825 462 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 SPINK2P20155 84 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 CA6P23280 308 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 APOBEC3AP31941 199 aaPredicted RBP4.82□□□□□ -1.64
FN1-224ENST00000492816 CD200P41217 278 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 EXOSC2Q13868 293 aaKnown RBP4.82□□□□□ -1.64
FN1-224ENST00000492816 ELP2Q6IA86 826 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 OR4A47Q6IF82 309 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 ANGPTL5Q86XS5 388 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 PXT1Q8NFP0 134 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 PHYHIPQ92561 330 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 DERL3Q96Q80 235 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 C7orf69Q9H7B7 122 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 RANGRFQ9HD47 186 aaPredicted RBP4.82□□□□□ -1.64
FN1-224ENST00000492816 PIPOXQ9P0Z9 390 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 S1PR2O95136 353 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 CD40P25942 277 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 SIGIRRQ6IA17 410 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 SLC25A26Q70HW3 274 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 FAM156AQ8NDB6 213 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 C16orf52Q8NHV5 167 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 NUBPLQ8TB37 319 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 MCRIP2Q9BUT9 160 aaKnown RBP4.82□□□□□ -1.64
FN1-224ENST00000492816 NEUROG3Q9Y4Z2 214 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 MN1Q10571 1320 aaPredicted RBP4.82□□□□□ -1.64
FN1-224ENST00000492816 A0A1W2PRX2 142 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 POM121CA8CG34 1229 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 GHRHP01286 108 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 GYPBP06028 91 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 SCGB1C2P0DMR2 95 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 PHLDA2Q53GA4 152 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 CLDN23Q96B33 292 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 SLC39A13Q96H72 371 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 TMEM101Q96IK0 257 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 ZNF426Q9BUY5 554 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 SF3B5Q9BWJ5 86 aaKnown RBP4.82□□□□□ -1.64
FN1-224ENST00000492816 A4GALTQ9NPC4 353 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 UFC1Q9Y3C8 167 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 B3GALT4O96024 378 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 TFPI2P48307 235 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 ZNF181Q2M3W8 571 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 ZNF404Q494X3 552 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 SOWAHCQ53LP3 525 aaPredicted RBP4.82□□□□□ -1.64
FN1-224ENST00000492816 OR2B11Q5JQS5 317 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 OR2T2Q6IF00 324 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 TMEM92Q6UXU6 159 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 NFAM1Q8NET5 270 aaPredicted RBP4.82□□□□□ -1.64
FN1-224ENST00000492816 PRR35P0CG20 571 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 HMGA1P17096 107 aaKnown RBP4.82□□□□□ -1.64
FN1-224ENST00000492816 HLA-GP17693 338 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 INPP5JQ15735 1006 aaPredicted RBP4.82□□□□□ -1.64
FN1-224ENST00000492816 SLCO4C1Q6ZQN7 724 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 SH2D5Q6ZV89 423 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 TM4SF18Q96CE8 201 aa4.82□□□□□ -1.64
FN1-224ENST00000492816 AQP7P3A6NL99 342 aa4.81□□□□□ -1.64
FN1-224ENST00000492816 CEACAM5P06731 702 aa4.81□□□□□ -1.64
FN1-224ENST00000492816 HOXB1P14653 301 aaPredicted RBP4.81□□□□□ -1.64
FN1-224ENST00000492816 RAB5BP61020 215 aa4.81□□□□□ -1.64
FN1-224ENST00000492816 JAG1P78504 1218 aa4.81□□□□□ -1.64
FN1-224ENST00000492816 BTG2P78543 158 aa4.81□□□□□ -1.64
FN1-224ENST00000492816 FAM122CQ6P4D5 195 aa4.81□□□□□ -1.64
FN1-224ENST00000492816 PAQR6Q6TCH4 344 aa4.81□□□□□ -1.64
FN1-224ENST00000492816 LRRC56Q8IYG6 542 aaPredicted RBP4.81□□□□□ -1.64
FN1-224ENST00000492816 ARIH2OSQ8N7S6 290 aa4.81□□□□□ -1.64
FN1-224ENST00000492816 OR51S1Q8NGJ8 323 aa4.81□□□□□ -1.64
FN1-224ENST00000492816 PP6455Q8WZ26 134 aa4.81□□□□□ -1.64
FN1-224ENST00000492816 MARVELD3Q96A59 401 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms