RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 ST3GAL4Q11206 333 aa1.53□□□□□ -2.16
HMGB1P30-201ENST00000492455 NDUFAF6Q330K2 333 aa1.53□□□□□ -2.16
HMGB1P30-201ENST00000492455 YIF1BQ5BJH7 314 aa1.53□□□□□ -2.16
HMGB1P30-201ENST00000492455 MFSD14CQ5VZR4 134 aa1.53□□□□□ -2.16
HMGB1P30-201ENST00000492455 UNQ9165/PRO28630Q6UXU0 137 aa1.53□□□□□ -2.16
HMGB1P30-201ENST00000492455 Q6ZSR6 202 aa1.53□□□□□ -2.16
HMGB1P30-201ENST00000492455 ERO1BQ86YB8 467 aa1.53□□□□□ -2.16
HMGB1P30-201ENST00000492455 ZNF101Q8IZC7 436 aa1.53□□□□□ -2.16
HMGB1P30-201ENST00000492455 PDCL2Q8N4E4 241 aa1.53□□□□□ -2.16
HMGB1P30-201ENST00000492455 RNF182Q8N6D2 247 aa1.53□□□□□ -2.16
HMGB1P30-201ENST00000492455 ASCC1Q8N9N2 400 aaKnown RBP1.53□□□□□ -2.16
HMGB1P30-201ENST00000492455 SPANXA2-OT1Q8N9U9 137 aa1.53□□□□□ -2.16
HMGB1P30-201ENST00000492455 OR13G1Q8NGZ3 307 aa1.53□□□□□ -2.16
HMGB1P30-201ENST00000492455 OR51A7Q8NH64 312 aa1.53□□□□□ -2.16
HMGB1P30-201ENST00000492455 CPNE4Q96A23 557 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P30-201ENST00000492455 CIDECQ96AQ7 238 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P30-201ENST00000492455 S100PBPQ96BU1 408 aa1.53□□□□□ -2.16
HMGB1P30-201ENST00000492455 CENPNQ96H22 339 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P30-201ENST00000492455 RNF170Q96K19 258 aa1.53□□□□□ -2.16
HMGB1P30-201ENST00000492455 LINC00477Q96M19 166 aa1.53□□□□□ -2.16
HMGB1P30-201ENST00000492455 TSNAXQ99598 290 aaKnown RBP1.53□□□□□ -2.16
HMGB1P30-201ENST00000492455 FBXO6Q9NRD1 293 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P30-201ENST00000492455 TMEM100Q9NV29 134 aa1.53□□□□□ -2.16
HMGB1P30-201ENST00000492455 C21orf62Q9NYP8 219 aa1.53□□□□□ -2.16
HMGB1P30-201ENST00000492455 NDRG2Q9UN36 371 aaKnown RBP1.53□□□□□ -2.16
HMGB1P30-201ENST00000492455 CBY1Q9Y3M2 126 aa1.53□□□□□ -2.16
HMGB1P30-201ENST00000492455 IGLV3-12A0A075B6K2 115 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 IGHV6-1A0A0B4J1U7 121 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 TRAV8-4A0A0B4J246 113 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 IGHV1-3A0A0C4DH29 117 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 NDUFS8O00217 210 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 MANBAO00462 879 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 RFXANKO14593 260 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 PRMT5O14744 637 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 MYL12BO14950 172 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 SPOPO43791 374 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 RCBTB2O95199 551 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 VAPBO95292 243 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 CYB5R3P00387 301 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 P01737 135 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 S100A9P06702 114 aaKnown RBP1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 ZNF14P17017 642 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 ERFP50548 548 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 XIAPP98170 497 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 C2orf54Q08AI8 447 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 ZNF616Q08AN1 781 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 DUPD1Q68J44 220 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 EPGNQ6UW88 154 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 PID1Q7Z2X4 250 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 SLC7A5P1Q8MH63 180 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 LINC00469Q8N7U9 141 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 CYB561A3Q8NBI2 242 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 OR1S1Q8NH92 325 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 ING5Q8WYH8 240 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 TMEM159Q96B96 161 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 CTRCQ99895 268 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 C20orf144Q9BQM9 153 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 RTBDNQ9BSG5 229 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 STMN4Q9H169 189 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 ZSCAN16Q9H4T2 348 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 STMN3Q9NZ72 180 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 FARSAQ9Y285 508 aaKnown RBP1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 PPIL1Q9Y3C6 166 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 V9GYY9 64 aa1.52□□□□□ -2.17
HMGB1P30-201ENST00000492455 AQRO60306 1485 aaKnown RBP eCLIP1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 JCADQ9P266 1359 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 C2orf16Q68DN1 1984 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 IGLV2-18A0A075B6J9 118 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 TRAV8-7A0A075B6U6 113 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 TRAV8-6A0A0B4J262 113 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 TRAV40A0A0B4J280 105 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 ANKRD20A5PA0PJZ0 165 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 SEC14L6B5MCN3 397 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 H7C2Y5 167 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 J3QT63 122 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 GATCO43716 136 aaKnown RBP1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 CCDC22O60826 627 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 RBBP9O75884 186 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 IL4P05112 153 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 IVLP07476 585 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 RHOCP08134 193 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 OR5AL1P0C617 328 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 PRKACBP22694 351 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 PAX6P26367 422 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 HTR2CP28335 458 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 PRSS3P35030 304 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 GALR1P47211 349 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 ETV1P50549 477 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 CMC4P56277 68 aaPredicted RBP1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 ELF3P78545 371 aaPredicted RBP1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 DYNC1I2Q13409 638 aaKnown RBP1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 DMC1Q14565 340 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 VAMP3Q15836 100 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 TAL2Q16559 108 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 PRSS8Q16651 343 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 C6orf183Q5T699 404 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 FAM27D1Q5T7N8 215 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 FAM222AQ5U5X8 452 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 AADACL4Q5VUY2 407 aa1.51□□□□□ -2.17
HMGB1P30-201ENST00000492455 NEGR1Q7Z3B1 354 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms