RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 NPY4RP50391 375 aa20.49■□□□□ 0.87
UPF3A-209ENST00000492270 HILS1P60008 231 aa20.49■□□□□ 0.87
UPF3A-209ENST00000492270 ZNF85Q03923 595 aa20.49■□□□□ 0.87
UPF3A-209ENST00000492270 RIPPLY1Q0D2K3 151 aa20.49■□□□□ 0.87
UPF3A-209ENST00000492270 TMED1Q13445 227 aa20.49■□□□□ 0.87
UPF3A-209ENST00000492270 ODF4Q2M2E3 257 aa20.49■□□□□ 0.87
UPF3A-209ENST00000492270 FAM76BQ5HYJ3 339 aa20.49■□□□□ 0.87
UPF3A-209ENST00000492270 WDR38Q5JTN6 314 aa20.49■□□□□ 0.87
UPF3A-209ENST00000492270 MOB3CQ70IA8 216 aa20.49■□□□□ 0.87
UPF3A-209ENST00000492270 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP20.49■□□□□ 0.87
UPF3A-209ENST00000492270 TRUB1Q8WWH5 349 aaKnown RBP20.49■□□□□ 0.87
UPF3A-209ENST00000492270 HIST1H2AAQ96QV6 131 aa20.49■□□□□ 0.87
UPF3A-209ENST00000492270 CCL13Q99616 98 aa20.49■□□□□ 0.87
UPF3A-209ENST00000492270 C9orf16Q9BUW7 83 aa20.49■□□□□ 0.87
UPF3A-209ENST00000492270 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.49■□□□□ 0.87
UPF3A-209ENST00000492270 ZNF69Q9UC07 566 aa20.49■□□□□ 0.87
UPF3A-209ENST00000492270 NUP50Q9UKX7 468 aa20.49■□□□□ 0.87
UPF3A-209ENST00000492270 METTL15A6NJ78 407 aa20.48■□□□□ 0.87
UPF3A-209ENST00000492270 ZNF732B4DXR9 585 aa20.48■□□□□ 0.87
UPF3A-209ENST00000492270 DVL1O14640 695 aa20.48■□□□□ 0.87
UPF3A-209ENST00000492270 TMPRSS2O15393 492 aa20.48■□□□□ 0.87
UPF3A-209ENST00000492270 AKR7A2O43488 359 aa20.48■□□□□ 0.87
UPF3A-209ENST00000492270 RHBDL1O75783 438 aa20.48■□□□□ 0.87
UPF3A-209ENST00000492270 MUC1P15941 1255 aaPredicted RBP20.48■□□□□ 0.87
UPF3A-209ENST00000492270 MICBQ29980 383 aa20.48■□□□□ 0.87
UPF3A-209ENST00000492270 CEACAM21Q3KPI0 293 aa20.48■□□□□ 0.87
UPF3A-209ENST00000492270 PLCXD3Q63HM9 321 aa20.48■□□□□ 0.87
UPF3A-209ENST00000492270 CATSPERDQ86XM0 798 aa20.48■□□□□ 0.87
UPF3A-209ENST00000492270 BCL6BQ8N143 479 aaPredicted RBP20.48■□□□□ 0.87
UPF3A-209ENST00000492270 OR5T2Q8NGG2 359 aa20.48■□□□□ 0.87
UPF3A-209ENST00000492270 OR10Z1Q8NGY1 313 aa20.48■□□□□ 0.87
UPF3A-209ENST00000492270 ENPP5Q9UJA9 477 aa20.48■□□□□ 0.87
UPF3A-209ENST00000492270 V9GYS6 101 aa20.48■□□□□ 0.87
UPF3A-209ENST00000492270 A6NIN4 97 aa20.47■□□□□ 0.87
UPF3A-209ENST00000492270 H3BSH0 61 aa20.47■□□□□ 0.87
UPF3A-209ENST00000492270 TFF1P04155 84 aa20.47■□□□□ 0.87
UPF3A-209ENST00000492270 MTNR1AP48039 350 aa20.47■□□□□ 0.87
UPF3A-209ENST00000492270 FGF12P61328 243 aa20.47■□□□□ 0.87
UPF3A-209ENST00000492270 SNRPGP62308 76 aaKnown RBP20.47■□□□□ 0.87
UPF3A-209ENST00000492270 TP53I3Q53FA7 332 aa20.47■□□□□ 0.87
UPF3A-209ENST00000492270 ZBTB37Q5TC79 503 aa20.47■□□□□ 0.87
UPF3A-209ENST00000492270 USP43Q70EL4 1123 aa20.47■□□□□ 0.87
UPF3A-209ENST00000492270 FAM216BQ8N7L0 139 aa20.47■□□□□ 0.87
UPF3A-209ENST00000492270 OR14K1Q8NGZ2 314 aa20.47■□□□□ 0.87
UPF3A-209ENST00000492270 RORBQ92753 470 aa20.47■□□□□ 0.87
UPF3A-209ENST00000492270 UPRTQ96BW1 309 aa20.47■□□□□ 0.87
UPF3A-209ENST00000492270 SUCNR1Q9BXA5 334 aa20.47■□□□□ 0.87
UPF3A-209ENST00000492270 OR51I2Q9H344 312 aa20.47■□□□□ 0.87
UPF3A-209ENST00000492270 ESM1Q9NQ30 184 aa20.47■□□□□ 0.87
UPF3A-209ENST00000492270 SNTG1Q9NSN8 517 aa20.47■□□□□ 0.87
UPF3A-209ENST00000492270 KAAG1Q9UBP8 84 aa20.47■□□□□ 0.87
UPF3A-209ENST00000492270 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.47■□□□□ 0.87
UPF3A-209ENST00000492270 GMPPBQ9Y5P6 360 aa20.47■□□□□ 0.87
UPF3A-209ENST00000492270 TRAV40A0A0B4J280 105 aa20.46■□□□□ 0.87
UPF3A-209ENST00000492270 ENSAO43768 121 aaKnown RBP20.46■□□□□ 0.87
UPF3A-209ENST00000492270 MTRF1O75570 445 aaKnown RBP20.46■□□□□ 0.87
UPF3A-209ENST00000492270 AMY2BP19961 511 aa20.46■□□□□ 0.87
UPF3A-209ENST00000492270 GNG3P63215 75 aa20.46■□□□□ 0.87
UPF3A-209ENST00000492270 OCLNQ16625 522 aa20.46■□□□□ 0.87
UPF3A-209ENST00000492270 SLC25A30Q5SVS4 291 aa20.46■□□□□ 0.87
UPF3A-209ENST00000492270 STUMQ69YW2 141 aa20.46■□□□□ 0.87
UPF3A-209ENST00000492270 ST8SIA4Q92187 359 aa20.46■□□□□ 0.87
UPF3A-209ENST00000492270 RNFT2Q96EX2 444 aa20.46■□□□□ 0.87
UPF3A-209ENST00000492270 GPR173Q9NS66 373 aa20.46■□□□□ 0.87
UPF3A-209ENST00000492270 SOX21Q9Y651 276 aaPredicted RBP20.46■□□□□ 0.87
UPF3A-209ENST00000492270 NRASP01111 189 aa20.45■□□□□ 0.86
UPF3A-209ENST00000492270 PPIAL4GP0DN37 164 aa20.45■□□□□ 0.86
UPF3A-209ENST00000492270 SELLP14151 372 aa20.45■□□□□ 0.86
UPF3A-209ENST00000492270 GABRB1P18505 474 aa20.45■□□□□ 0.86
UPF3A-209ENST00000492270 FPR2P25090 351 aa20.45■□□□□ 0.86
UPF3A-209ENST00000492270 CD276Q5ZPR3 534 aa20.45■□□□□ 0.86
UPF3A-209ENST00000492270 ZBTB49Q6ZSB9 765 aa20.45■□□□□ 0.86
UPF3A-209ENST00000492270 SIGLECL1Q8N7X8 197 aa20.45■□□□□ 0.86
UPF3A-209ENST00000492270 OR5A2Q8NGI9 324 aa20.45■□□□□ 0.86
UPF3A-209ENST00000492270 ITFG2Q969R8 447 aa20.45■□□□□ 0.86
UPF3A-209ENST00000492270 ACOXLQ9NUZ1 547 aa20.45■□□□□ 0.86
UPF3A-209ENST00000492270 DNAJB11Q9UBS4 358 aa20.45■□□□□ 0.86
UPF3A-209ENST00000492270 GNG8Q9UK08 70 aa20.45■□□□□ 0.86
UPF3A-209ENST00000492270 OR5B21A6NL26 309 aa20.44■□□□□ 0.86
UPF3A-209ENST00000492270 J3QRE1 110 aa20.44■□□□□ 0.86
UPF3A-209ENST00000492270 SULT1C4O75897 302 aa20.44■□□□□ 0.86
UPF3A-209ENST00000492270 BAG2O95816 211 aa20.44■□□□□ 0.86
UPF3A-209ENST00000492270 CCL1P22362 96 aa20.44■□□□□ 0.86
UPF3A-209ENST00000492270 ISL1P61371 349 aa20.44■□□□□ 0.86
UPF3A-209ENST00000492270 TUSC1Q2TAM9 212 aa20.44■□□□□ 0.86
UPF3A-209ENST00000492270 MEDAGQ5VYS4 303 aa20.44■□□□□ 0.86
UPF3A-209ENST00000492270 TMEM42Q69YG0 159 aa20.44■□□□□ 0.86
UPF3A-209ENST00000492270 Q6ZSR3 168 aa20.44■□□□□ 0.86
UPF3A-209ENST00000492270 BTN2A1Q7KYR7 527 aa20.44■□□□□ 0.86
UPF3A-209ENST00000492270 DOK3Q7L591 496 aa20.44■□□□□ 0.86
UPF3A-209ENST00000492270 ENTHD1Q8IYW4 607 aa20.44■□□□□ 0.86
UPF3A-209ENST00000492270 PRSS35Q8N3Z0 413 aa20.44■□□□□ 0.86
UPF3A-209ENST00000492270 RNF166Q96A37 237 aaPredicted RBP20.44■□□□□ 0.86
UPF3A-209ENST00000492270 C12orf43Q96C57 262 aaKnown RBP20.44■□□□□ 0.86
UPF3A-209ENST00000492270 ZNF48Q96MX3 618 aaPredicted RBP20.44■□□□□ 0.86
UPF3A-209ENST00000492270 SFTPBP07988 381 aa20.43■□□□□ 0.86
UPF3A-209ENST00000492270 KIR3DL2P43630 455 aa20.43■□□□□ 0.86
UPF3A-209ENST00000492270 IKZF1Q13422 519 aa20.43■□□□□ 0.86
UPF3A-209ENST00000492270 CLVS2Q5SYC1 327 aa20.43■□□□□ 0.86
UPF3A-209ENST00000492270 HAGHLQ6PII5 290 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms