RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 ZNF850A8MQ14 1090 aa6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 RNASEK-C17orf49H0YIS7 233 aa6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 M0R1W7 72 aa6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 SIGLEC5O15389 551 aa6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 NDUFB3O43676 98 aa6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 NOS1APO75052 506 aaPredicted RBP6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 FKBP6O75344 327 aa6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 ZNF254O75437 659 aa6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 OMGP23515 440 aa6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 GNALP38405 381 aa6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 CRISP1P54107 249 aa6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 PROK1P58294 105 aa6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 KRTAP10-3P60369 221 aa6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 DGUOKQ16854 277 aa6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 LRRC10Q5BKY1 277 aa6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 TMEM42Q69YG0 159 aa6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 VMO1Q7Z5L0 202 aa6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 OR5A2Q8NGI9 324 aa6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 LINC01006Q8NI28 216 aa6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 RPL3LQ92901 407 aaKnown RBP6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 LHX4Q969G2 390 aa6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 SDSLQ96GA7 329 aa6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 PGAM5Q96HS1 289 aa6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 RNF170Q96K19 258 aa6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 GAFA1Q96PS6 74 aa6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 C16orf95Q9H693 158 aa6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 DNAJC27Q9NZQ0 273 aa6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 POMPQ9Y244 141 aa6.87□□□□□ -1.31
SMARCB1-207ENST00000491967 ZNF816-ZNF321PA0A0X1KG74 233 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 TMEM269A0A1B0GVZ9 245 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 OR2AT4A6NND4 320 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 AKR7A2O43488 359 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 GPR137BO60478 399 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 MTRF1O75570 445 aaKnown RBP6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 RHBDL1O75783 438 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 TSPAN9O75954 239 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 KNG1P01042 644 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 IGHV4-59P01825 116 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 CRYBA1P05813 215 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 SELLP14151 372 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 POU1F1P28069 291 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 MAP2K3P46734 347 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 DAPP51397 102 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 UBE2E1P51965 193 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 HCCSP53701 268 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 ESRRGP62508 458 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 GNG3P63215 75 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 CBX1P83916 185 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 GUCA2AQ02747 115 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 SRSF4Q08170 494 aaKnown RBP6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 TAF9Q16594 264 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 DNAL1Q4LDG9 190 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 AADACL4Q5VUY2 407 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 TMEM236Q5W0B7 351 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 HCP5Q6MZN7 132 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 KCTD18Q6PI47 426 aaPredicted RBP6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 ZDHHC23Q8IYP9 409 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 ZNF679Q8IYX0 411 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 C11orf42Q8N5U0 333 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 OR5T2Q8NGG2 359 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 ASB17Q8WXJ9 295 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 ST8SIA4Q92187 359 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 AQP3Q92482 292 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 PIGCQ92535 297 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 OR8B4Q96RC9 309 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 DPAGT1Q9H3H5 408 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 METTL8Q9H825 291 aaKnown RBP6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 YY1AP1Q9H869 796 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 ZNF556Q9HAH1 456 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 BRD7Q9NPI1 651 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 RASL12Q9NYN1 266 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 ZNRD1Q9P1U0 126 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 NLKQ9UBE8 527 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 NUFIP1Q9UHK0 495 aaKnown RBP6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 MAB21L2Q9Y586 359 aa6.86□□□□□ -1.31
SMARCB1-207ENST00000491967 TRBV23-1A0A0A0MS06 115 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 A0A1B0GTI1 187 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 MEGF11A6BM72 1044 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 OR5B21A6NL26 309 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 DHRS7CA6NNS2 312 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 ZNF732B4DXR9 585 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 GNGT2O14610 69 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 NPFFO15130 113 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 PRKYO43930 277 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 TTRP02766 147 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 PSG2P11465 335 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 MPZP25189 248 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 GPM6AP51674 278 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 ACSM1Q08AH1 577 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 IKZF1Q13422 519 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 APOFQ13790 326 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 FLOT2Q14254 428 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 PTGES3Q15185 160 aaKnown RBP6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 SNAPC1Q16533 368 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 AANATQ16613 207 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 GFOD2Q3B7J2 385 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 ASPHD2Q6ICH7 369 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 CRIP3Q6Q6R5 217 aa6.85□□□□□ -1.31
SMARCB1-207ENST00000491967 GDPGP1Q6ZNW5 385 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms