RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 RGCCQ9H4X1 137 aa10.63□□□□□ -0.71
SEC61A1-206ENST00000491668 OPA3Q9H6K4 179 aa10.63□□□□□ -0.71
SEC61A1-206ENST00000491668 C7orf69Q9H7B7 122 aa10.63□□□□□ -0.71
SEC61A1-206ENST00000491668 TRIM36Q9NQ86 728 aa10.63□□□□□ -0.71
SEC61A1-206ENST00000491668 BABAM2Q9NXR7 383 aa10.63□□□□□ -0.71
SEC61A1-206ENST00000491668 PKD1L1Q8TDX9 2849 aa10.63□□□□□ -0.71
SEC61A1-206ENST00000491668 TRBV2A0A0J9YWF9 115 aa10.62□□□□□ -0.71
SEC61A1-206ENST00000491668 CEACAM18A8MTB9 384 aa10.62□□□□□ -0.71
SEC61A1-206ENST00000491668 A8MXK9 166 aa10.62□□□□□ -0.71
SEC61A1-206ENST00000491668 MRPS14O60783 128 aaKnown RBP10.62□□□□□ -0.71
SEC61A1-206ENST00000491668 WNT2P09544 360 aa10.62□□□□□ -0.71
SEC61A1-206ENST00000491668 GATA3P23771 443 aa10.62□□□□□ -0.71
SEC61A1-206ENST00000491668 MDH2P40926 338 aaKnown RBP10.62□□□□□ -0.71
SEC61A1-206ENST00000491668 GATA4P43694 442 aa10.62□□□□□ -0.71
SEC61A1-206ENST00000491668 TAS2R43P59537 309 aa10.62□□□□□ -0.71
SEC61A1-206ENST00000491668 PAX2Q02962 417 aa10.62□□□□□ -0.71
SEC61A1-206ENST00000491668 MPPED2Q15777 294 aa10.62□□□□□ -0.71
SEC61A1-206ENST00000491668 KCTD21Q4G0X4 260 aa10.62□□□□□ -0.71
SEC61A1-206ENST00000491668 KLF17Q5JT82 389 aaPredicted RBP10.62□□□□□ -0.71
SEC61A1-206ENST00000491668 RNLSQ5VYX0 342 aa10.62□□□□□ -0.71
SEC61A1-206ENST00000491668 SPICQ8N5J4 248 aa10.62□□□□□ -0.71
SEC61A1-206ENST00000491668 ZNF676Q8N7Q3 588 aa10.62□□□□□ -0.71
SEC61A1-206ENST00000491668 OR2AE1Q8NHA4 323 aa10.62□□□□□ -0.71
SEC61A1-206ENST00000491668 DVL3Q92997 716 aaPredicted RBP10.62□□□□□ -0.71
SEC61A1-206ENST00000491668 DACT3Q96B18 629 aaPredicted RBP10.62□□□□□ -0.71
SEC61A1-206ENST00000491668 REEP6Q96HR9 211 aa10.62□□□□□ -0.71
SEC61A1-206ENST00000491668 ZNF649Q9BS31 505 aa10.62□□□□□ -0.71
SEC61A1-206ENST00000491668 COMMD4Q9H0A8 199 aa10.62□□□□□ -0.71
SEC61A1-206ENST00000491668 TMEM100Q9NV29 134 aa10.62□□□□□ -0.71
SEC61A1-206ENST00000491668 NUFIP1Q9UHK0 495 aaKnown RBP10.62□□□□□ -0.71
SEC61A1-206ENST00000491668 ZNF391Q9UJN7 358 aa10.62□□□□□ -0.71
SEC61A1-206ENST00000491668 SLC22A13Q9Y226 551 aa10.62□□□□□ -0.71
SEC61A1-206ENST00000491668 A0A0A6YYJ9 748 aa10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 A0A0U1RQV5 110 aa10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 CD300LBA8K4G0 201 aa10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 MTRF1O75570 445 aaKnown RBP10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 FOXH1O75593 365 aa10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 UBCP0CG48 685 aaKnown RBP10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 HSMCR30P0CW71 290 aa10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 ZNF12P17014 697 aa10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 MAP2K4P45985 399 aa10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 SRP9P49458 86 aaKnown RBP10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 HILS1P60008 231 aa10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 ALKBH1Q13686 389 aaKnown RBP10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 SPHARQ15513 63 aa10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 ZNF181Q2M3W8 571 aa10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 CCDC58Q4VC31 144 aa10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 WDR38Q5JTN6 314 aa10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 RPL22L1Q6P5R6 122 aaKnown RBP10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 ZNF773Q6PK81 442 aa10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 PRSS45Q7RTY3 260 aa10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 CATSPERDQ86XM0 798 aa10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 ELMOD2Q8IZ81 293 aa10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 OR2G2Q8NGZ5 317 aa10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 OR51E1Q8TCB6 317 aa10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 Q8TCH9 128 aa10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 PPP1R14AQ96A00 147 aa10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 SGK3Q96BR1 496 aa10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 FAM71F1Q96KD3 344 aaPredicted RBP10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 NR1H4Q96RI1 486 aaPredicted RBP10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 SLC6A7Q99884 636 aa10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 VCX3AQ9NNX9 186 aa10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 ESM1Q9NQ30 184 aa10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 PCDHB10Q9UN67 800 aa10.61□□□□□ -0.71
SEC61A1-206ENST00000491668 A0A087WXM4 84 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 PNMA8CA0A1B0GUJ8 204 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 A0A1B0GVI7 797 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 E9PI62 339 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 H3BSH0 61 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 P2RY10O00398 339 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 SRSF10O75494 262 aaKnown RBP10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 FSTL3O95633 263 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 PTBP3O95758 552 aaKnown RBP10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 CA6P23280 308 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 CD80P33681 288 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 CD200P41217 278 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 TGM4P49221 684 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 CCR9P51686 369 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 GTF2A1P52655 376 aaPredicted RBP10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 ZNF154Q13106 437 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 IRF3Q14653 427 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 ZNF404Q494X3 552 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 TMEM244Q5VVB8 128 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 PRAMEF6Q5VXH4 476 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 FDX2Q6P4F2 183 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 USP43Q70EL4 1123 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 PRSS35Q8N3Z0 413 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 FTMTQ8N4E7 242 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 C19orf18Q8NEA5 215 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 TSPAN14Q8NG11 270 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 OR5AK2Q8NH90 309 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 NANPQ8TBE9 248 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 C22orf15Q8WYQ4 148 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 TMEM246Q9BRR3 403 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 PLEKHA1Q9HB21 404 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 GPR84Q9NQS5 396 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 FRRS1LQ9P0K9 344 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 ZNF319Q9P2F9 582 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 INSIG2Q9Y5U4 225 aa10.6□□□□□ -0.71
SEC61A1-206ENST00000491668 LOC107986453A0A1B0GWG9 222 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms