RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 CHCHD3Q9NX63 227 aaKnown RBP8.65□□□□□ -1.02
TTC28-207ENST00000490475 HAO2Q9NYQ3 351 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 MRPL15Q9P015 296 aaKnown RBP8.65□□□□□ -1.02
TTC28-207ENST00000490475 RNF7Q9UBF6 113 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 WARS2Q9UGM6 360 aaKnown RBP8.65□□□□□ -1.02
TTC28-207ENST00000490475 BLOC1S6Q9UL45 172 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 LRP12Q9Y561 859 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 PCDHGB1Q9Y5G3 927 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 TRAV38-1A0A0B4J264 116 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 GGT3PA6NGU5 568 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 CD300LBA8K4G0 201 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 P2RY10O00398 339 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 TMPRSS2O15393 492 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 SLC16A6O15403 523 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 CRYBA1P05813 215 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 GABRB1P18505 474 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 CA6P23280 308 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 ATP6V1E1P36543 226 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 ADARB1P78563 741 aaKnown RBP8.64□□□□□ -1.03
TTC28-207ENST00000490475 ROM1Q03395 351 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 OCLNQ16625 522 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 SLC25A30Q5SVS4 291 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 WDR25Q64LD2 544 aaPredicted RBP8.64□□□□□ -1.03
TTC28-207ENST00000490475 KCTD18Q6PI47 426 aaPredicted RBP8.64□□□□□ -1.03
TTC28-207ENST00000490475 ZNF773Q6PK81 442 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 ZNF322Q6U7Q0 402 aaPredicted RBP8.64□□□□□ -1.03
TTC28-207ENST00000490475 Q6ZNX1 250 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 SSX6Q7RTT6 188 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 ENTHD1Q8IYW4 607 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 ZNF679Q8IYX0 411 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 TMEM86BQ8N661 226 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 PNLDC1Q8NA58 520 aaKnown RBP8.64□□□□□ -1.03
TTC28-207ENST00000490475 RHOXF1Q8NHV9 184 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 RAB2BQ8WUD1 216 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 ASB17Q8WXJ9 295 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 RFKQ969G6 155 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 ZDHHC16Q969W1 377 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 SPSB4Q96A44 273 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 PGAM5Q96HS1 289 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 FAM71F1Q96KD3 344 aaPredicted RBP8.64□□□□□ -1.03
TTC28-207ENST00000490475 DMRTB1Q96MA1 342 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 MROQ9BYG7 248 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 PRDM13Q9H4Q3 707 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 C14orf119Q9NWQ9 140 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 MMP24Q9Y5R2 645 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 TMEM14AQ9Y6G1 99 aa8.64□□□□□ -1.03
TTC28-207ENST00000490475 TRAV40A0A0B4J280 105 aa8.63□□□□□ -1.03
TTC28-207ENST00000490475 TMEM269A0A1B0GVZ9 245 aa8.63□□□□□ -1.03
TTC28-207ENST00000490475 A0A1W2PQL4 384 aaPredicted RBP8.63□□□□□ -1.03
TTC28-207ENST00000490475 ZNF670-ZNF695F2Z2N8 137 aa8.63□□□□□ -1.03
TTC28-207ENST00000490475 LGALS8O00214 317 aa8.63□□□□□ -1.03
TTC28-207ENST00000490475 XRCC2O43543 280 aa8.63□□□□□ -1.03
TTC28-207ENST00000490475 PTBP3O95758 552 aaKnown RBP8.63□□□□□ -1.03
TTC28-207ENST00000490475 ECDO95905 644 aaPredicted RBP8.63□□□□□ -1.03
TTC28-207ENST00000490475 CFL1P23528 166 aaKnown RBP8.63□□□□□ -1.03
TTC28-207ENST00000490475 PSMB10P40306 273 aa8.63□□□□□ -1.03
TTC28-207ENST00000490475 FAM3AP98173 230 aa8.63□□□□□ -1.03
TTC28-207ENST00000490475 MAB21L1Q13394 359 aa8.63□□□□□ -1.03
TTC28-207ENST00000490475 SLC9A3R2Q15599 337 aa8.63□□□□□ -1.03
TTC28-207ENST00000490475 TIGD6Q17RP2 521 aa8.63□□□□□ -1.03
TTC28-207ENST00000490475 DEGS2Q6QHC5 323 aa8.63□□□□□ -1.03
TTC28-207ENST00000490475 PLEKHG7Q6ZR37 379 aa8.63□□□□□ -1.03
TTC28-207ENST00000490475 ZNF554Q86TJ5 538 aa8.63□□□□□ -1.03
TTC28-207ENST00000490475 FTMTQ8N4E7 242 aa8.63□□□□□ -1.03
TTC28-207ENST00000490475 OR10H4Q8NGA5 316 aa8.63□□□□□ -1.03
TTC28-207ENST00000490475 OR52H1Q8NGJ2 320 aa8.63□□□□□ -1.03
TTC28-207ENST00000490475 DACT3Q96B18 629 aaPredicted RBP8.63□□□□□ -1.03
TTC28-207ENST00000490475 ITPKCQ96DU7 683 aa8.63□□□□□ -1.03
TTC28-207ENST00000490475 RNFT2Q96EX2 444 aa8.63□□□□□ -1.03
TTC28-207ENST00000490475 REEP6Q96HR9 211 aa8.63□□□□□ -1.03
TTC28-207ENST00000490475 LYZL4Q96KX0 146 aa8.63□□□□□ -1.03
TTC28-207ENST00000490475 OR8B4Q96RC9 309 aa8.63□□□□□ -1.03
TTC28-207ENST00000490475 ADAT1Q9BUB4 502 aaKnown RBP8.63□□□□□ -1.03
TTC28-207ENST00000490475 OR10A2Q9H208 303 aa8.63□□□□□ -1.03
TTC28-207ENST00000490475 PPP1R3EQ9H7J1 279 aa8.63□□□□□ -1.03
TTC28-207ENST00000490475 NIPAL2Q9H841 368 aa8.63□□□□□ -1.03
TTC28-207ENST00000490475 UNKLQ9H9P5 680 aaKnown RBP8.63□□□□□ -1.03
TTC28-207ENST00000490475 AMBNQ9NP70 447 aa8.63□□□□□ -1.03
TTC28-207ENST00000490475 MRM2Q9UI43 246 aaKnown RBP8.63□□□□□ -1.03
TTC28-207ENST00000490475 IKZF2Q9UKS7 526 aa8.63□□□□□ -1.03
TTC28-207ENST00000490475 PCDHGB5Q9Y5G0 923 aa8.63□□□□□ -1.03
TTC28-207ENST00000490475 POMT1Q9Y6A1 747 aa8.63□□□□□ -1.03
TTC28-207ENST00000490475 HSPE1-MOB4S4R3N1 261 aa8.63□□□□□ -1.03
TTC28-207ENST00000490475 A0A1B0GVG6 124 aa8.62□□□□□ -1.03
TTC28-207ENST00000490475 SRRM5B3KS81 715 aa8.62□□□□□ -1.03
TTC28-207ENST00000490475 GPR37O15354 613 aa8.62□□□□□ -1.03
TTC28-207ENST00000490475 FAM20BO75063 409 aa8.62□□□□□ -1.03
TTC28-207ENST00000490475 ZNF254O75437 659 aa8.62□□□□□ -1.03
TTC28-207ENST00000490475 CLIC3O95833 236 aa8.62□□□□□ -1.03
TTC28-207ENST00000490475 OR2T7P0C7T2 308 aa8.62□□□□□ -1.03
TTC28-207ENST00000490475 IGHV4-38-2P0DP08 117 aa8.62□□□□□ -1.03
TTC28-207ENST00000490475 GSK3AP49840 483 aa8.62□□□□□ -1.03
TTC28-207ENST00000490475 RIDAP52758 137 aaKnown RBP8.62□□□□□ -1.03
TTC28-207ENST00000490475 POU4F2Q12837 409 aa8.62□□□□□ -1.03
TTC28-207ENST00000490475 TMED1Q13445 227 aa8.62□□□□□ -1.03
TTC28-207ENST00000490475 PDCD1Q15116 288 aa8.62□□□□□ -1.03
TTC28-207ENST00000490475 METTL11BQ5VVY1 283 aa8.62□□□□□ -1.03
TTC28-207ENST00000490475 MEDAGQ5VYS4 303 aa8.62□□□□□ -1.03
TTC28-207ENST00000490475 CLVS1Q8IUQ0 354 aaPredicted RBP8.62□□□□□ -1.03
TTC28-207ENST00000490475 BCL6BQ8N143 479 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms