RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 UBBP0CG47 229 aa18.55■□□□□ 0.56
SMC4-221ENST00000489573 GCH1P30793 250 aa18.55■□□□□ 0.56
SMC4-221ENST00000489573 PTGFRP43088 359 aa18.55■□□□□ 0.56
SMC4-221ENST00000489573 EFNB2P52799 333 aa18.55■□□□□ 0.56
SMC4-221ENST00000489573 CDSNQ15517 529 aa18.55■□□□□ 0.56
SMC4-221ENST00000489573 CEACAM21Q3KPI0 293 aa18.55■□□□□ 0.56
SMC4-221ENST00000489573 PYDC2Q56P42 97 aa18.55■□□□□ 0.56
SMC4-221ENST00000489573 RGS7BPQ6MZT1 257 aaPredicted RBP18.55■□□□□ 0.56
SMC4-221ENST00000489573 DTX3Q8N9I9 347 aa18.55■□□□□ 0.56
SMC4-221ENST00000489573 OR5D18Q8NGL1 313 aa18.55■□□□□ 0.56
SMC4-221ENST00000489573 HPSE2Q8WWQ2 592 aa18.55■□□□□ 0.56
SMC4-221ENST00000489573 HIST1H2AAQ96QV6 131 aa18.55■□□□□ 0.56
SMC4-221ENST00000489573 SDHCQ99643 169 aaPredicted RBP18.55■□□□□ 0.56
SMC4-221ENST00000489573 NGBQ9NPG2 151 aa18.55■□□□□ 0.56
SMC4-221ENST00000489573 GHRLQ9UBU3 117 aa18.55■□□□□ 0.56
SMC4-221ENST00000489573 PURGQ9UJV8 347 aaKnown RBP18.55■□□□□ 0.56
SMC4-221ENST00000489573 RAB6AP20340 208 aa18.55■□□□□ 0.56
SMC4-221ENST00000489573 ALDH3B1P43353 468 aa18.55■□□□□ 0.56
SMC4-221ENST00000489573 NR4A2P43354 598 aa18.55■□□□□ 0.56
SMC4-221ENST00000489573 PITPNBP48739 271 aa18.55■□□□□ 0.56
SMC4-221ENST00000489573 MMP15P51511 669 aa18.55■□□□□ 0.56
SMC4-221ENST00000489573 ZP1P60852 638 aa18.55■□□□□ 0.56
SMC4-221ENST00000489573 NKX6-1P78426 367 aaPredicted RBP18.55■□□□□ 0.56
SMC4-221ENST00000489573 OR2W3Q7Z3T1 314 aa18.55■□□□□ 0.56
SMC4-221ENST00000489573 GDPD1Q8N9F7 314 aa18.55■□□□□ 0.56
SMC4-221ENST00000489573 RADILQ96JH8 1075 aa18.55■□□□□ 0.56
SMC4-221ENST00000489573 C1orf147Q96MC9 270 aaPredicted RBP18.55■□□□□ 0.56
SMC4-221ENST00000489573 FBLN5Q9UBX5 448 aa18.55■□□□□ 0.56
SMC4-221ENST00000489573 PRR14LQ5THK1 2151 aa18.55■□□□□ 0.56
SMC4-221ENST00000489573 A0A0G2JMP0 313 aa18.54■□□□□ 0.56
SMC4-221ENST00000489573 A0A0X1KG70 313 aa18.54■□□□□ 0.56
SMC4-221ENST00000489573 PQLC2LA1A4F0 135 aa18.54■□□□□ 0.56
SMC4-221ENST00000489573 UPK1BO75841 260 aa18.54■□□□□ 0.56
SMC4-221ENST00000489573 VSIG8P0DPA2 414 aa18.54■□□□□ 0.56
SMC4-221ENST00000489573 NAT2P11245 290 aa18.54■□□□□ 0.56
SMC4-221ENST00000489573 KITLGP21583 273 aa18.54■□□□□ 0.56
SMC4-221ENST00000489573 GLRXP35754 106 aa18.54■□□□□ 0.56
SMC4-221ENST00000489573 RPS23P62266 143 aaKnown RBP18.54■□□□□ 0.56
SMC4-221ENST00000489573 QRFPP83859 136 aa18.54■□□□□ 0.56
SMC4-221ENST00000489573 SORDQ00796 357 aa18.54■□□□□ 0.56
SMC4-221ENST00000489573 TMEM255AQ5JRV8 349 aa18.54■□□□□ 0.56
SMC4-221ENST00000489573 OR10K2Q6IF99 312 aa18.54■□□□□ 0.56
SMC4-221ENST00000489573 OR4M2Q8NGB6 313 aa18.54■□□□□ 0.56
SMC4-221ENST00000489573 DVL3Q92997 716 aaPredicted RBP18.54■□□□□ 0.56
SMC4-221ENST00000489573 ITPKCQ96DU7 683 aa18.54■□□□□ 0.56
SMC4-221ENST00000489573 MYEF2Q9P2K5 600 aaKnown RBP18.54■□□□□ 0.56
SMC4-221ENST00000489573 RABL2AQ9UBK7 228 aaPredicted RBP18.54■□□□□ 0.56
SMC4-221ENST00000489573 RAB22AQ9UL26 194 aa18.54■□□□□ 0.56
SMC4-221ENST00000489573 RABL2BQ9UNT1 228 aa18.54■□□□□ 0.56
SMC4-221ENST00000489573 DPRXA6NFQ7 191 aa18.53■□□□□ 0.56
SMC4-221ENST00000489573 TMEM14DPA8MWL7 114 aa18.53■□□□□ 0.56
SMC4-221ENST00000489573 B8ZZF3 427 aa18.53■□□□□ 0.56
SMC4-221ENST00000489573 CTAG2O75638 210 aa18.53■□□□□ 0.56
SMC4-221ENST00000489573 PRB1P04280 392 aa18.53■□□□□ 0.56
SMC4-221ENST00000489573 CA6P23280 308 aa18.53■□□□□ 0.56
SMC4-221ENST00000489573 FABP6P51161 128 aa18.53■□□□□ 0.56
SMC4-221ENST00000489573 UNC119Q13432 240 aa18.53■□□□□ 0.56
SMC4-221ENST00000489573 ALKBH6Q3KRA9 238 aa18.53■□□□□ 0.56
SMC4-221ENST00000489573 PYHIN1Q6K0P9 492 aa18.53■□□□□ 0.56
SMC4-221ENST00000489573 SNX29P2Q8IUI4 249 aa18.53■□□□□ 0.56
SMC4-221ENST00000489573 OR5A2Q8NGI9 324 aa18.53■□□□□ 0.56
SMC4-221ENST00000489573 OR5P3Q8WZ94 311 aa18.53■□□□□ 0.56
SMC4-221ENST00000489573 S100A13Q99584 98 aa18.53■□□□□ 0.56
SMC4-221ENST00000489573 FGF23Q9GZV9 251 aaPredicted RBP18.53■□□□□ 0.56
SMC4-221ENST00000489573 ABCB10Q9NRK6 738 aa18.53■□□□□ 0.56
SMC4-221ENST00000489573 NDRG3Q9UGV2 375 aa18.53■□□□□ 0.56
SMC4-221ENST00000489573 ING4Q9UNL4 249 aa18.53■□□□□ 0.56
SMC4-221ENST00000489573 PCNX1Q96RV3 2341 aa18.53■□□□□ 0.56
SMC4-221ENST00000489573 TIMM8AO60220 97 aaPredicted RBP18.52■□□□□ 0.56
SMC4-221ENST00000489573 TMEM225BP0DP42 221 aa18.52■□□□□ 0.56
SMC4-221ENST00000489573 CDK2P24941 298 aa18.52■□□□□ 0.56
SMC4-221ENST00000489573 ZNF181Q2M3W8 571 aa18.52■□□□□ 0.56
SMC4-221ENST00000489573 TMEM69Q5SWH9 247 aa18.52■□□□□ 0.56
SMC4-221ENST00000489573 IZUMO1Q8IYV9 350 aa18.52■□□□□ 0.56
SMC4-221ENST00000489573 ATG5Q9H1Y0 275 aa18.52■□□□□ 0.56
SMC4-221ENST00000489573 FZR1Q9UM11 496 aa18.52■□□□□ 0.56
SMC4-221ENST00000489573 ESPL1Q14674 2120 aa18.52■□□□□ 0.55
SMC4-221ENST00000489573 OR5B21A6NL26 309 aa18.51■□□□□ 0.55
SMC4-221ENST00000489573 ZNF732B4DXR9 585 aa18.51■□□□□ 0.55
SMC4-221ENST00000489573 GRNP28799 593 aaKnown RBP18.51■□□□□ 0.55
SMC4-221ENST00000489573 GPM6AP51674 278 aa18.51■□□□□ 0.55
SMC4-221ENST00000489573 PITPNAQ00169 270 aa18.51■□□□□ 0.55
SMC4-221ENST00000489573 BSPH1Q075Z2 132 aa18.51■□□□□ 0.55
SMC4-221ENST00000489573 C1QL2Q7Z5L3 287 aa18.51■□□□□ 0.55
SMC4-221ENST00000489573 BIVMQ86UB2 503 aa18.51■□□□□ 0.55
SMC4-221ENST00000489573 OR8H2Q8N162 312 aa18.51■□□□□ 0.55
SMC4-221ENST00000489573 NUP37Q8NFH4 326 aa18.51■□□□□ 0.55
SMC4-221ENST00000489573 OR8G5Q8NG78 346 aa18.51■□□□□ 0.55
SMC4-221ENST00000489573 KCNG3Q8TAE7 436 aa18.51■□□□□ 0.55
SMC4-221ENST00000489573 FAM46BQ96A09 425 aa18.51■□□□□ 0.55
SMC4-221ENST00000489573 PHF21AQ96BD5 680 aa18.51■□□□□ 0.55
SMC4-221ENST00000489573 RNF170Q96K19 258 aa18.51■□□□□ 0.55
SMC4-221ENST00000489573 CST11Q9H112 138 aa18.51■□□□□ 0.55
SMC4-221ENST00000489573 DIABLOQ9NR28 239 aa18.51■□□□□ 0.55
SMC4-221ENST00000489573 NOP16Q9Y3C1 178 aaKnown RBP18.51■□□□□ 0.55
SMC4-221ENST00000489573 ABCD4O14678 606 aa18.51■□□□□ 0.55
SMC4-221ENST00000489573 SPRY1O43609 319 aaPredicted RBP18.51■□□□□ 0.55
SMC4-221ENST00000489573 PLATP00750 562 aa18.51■□□□□ 0.55
SMC4-221ENST00000489573 ZNF250P15622 560 aa18.51■□□□□ 0.55
SMC4-221ENST00000489573 AGAP20933 346 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms