RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 LPCAT4Q643R3 524 aa11.17□□□□□ -0.62
CCL28-202ENST00000489442 CATSPERDQ86XM0 798 aa11.17□□□□□ -0.62
CCL28-202ENST00000489442 SCCPDHQ8NBX0 429 aa11.17□□□□□ -0.62
CCL28-202ENST00000489442 OR5A2Q8NGI9 324 aa11.17□□□□□ -0.62
CCL28-202ENST00000489442 CYGBQ8WWM9 190 aa11.17□□□□□ -0.62
CCL28-202ENST00000489442 RORBQ92753 470 aa11.17□□□□□ -0.62
CCL28-202ENST00000489442 LGALS12Q96DT0 336 aa11.17□□□□□ -0.62
CCL28-202ENST00000489442 AMBNQ9NP70 447 aa11.17□□□□□ -0.62
CCL28-202ENST00000489442 RPL36Q9Y3U8 105 aaKnown RBP11.17□□□□□ -0.62
CCL28-202ENST00000489442 AUP1Q9Y679 476 aa11.17□□□□□ -0.62
CCL28-202ENST00000489442 A6NIN4 97 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 OR5B21A6NL26 309 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 H3BSH0 61 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 J3QLW9 94 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 TMPRSS2O15393 492 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 SYT7O43581 403 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 DBTP11182 482 aaKnown RBP11.16□□□□□ -0.62
CCL28-202ENST00000489442 MUC1P15941 1255 aaPredicted RBP11.16□□□□□ -0.62
CCL28-202ENST00000489442 ZNF12P17014 697 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 ZNF19P17023 458 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 EGR1P18146 543 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 GABRB1P18505 474 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 CFHR2P36980 270 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 NPY4RP50391 375 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 ACTA2P62736 377 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 ACTG2P63267 376 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 ZNF91Q05481 1191 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 GABPB1Q06547 395 aaPredicted RBP11.16□□□□□ -0.62
CCL28-202ENST00000489442 KLHL22Q53GT1 634 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 TTC23Q5W5X9 447 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 CD276Q5ZPR3 534 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 WDR25Q64LD2 544 aaPredicted RBP11.16□□□□□ -0.62
CCL28-202ENST00000489442 C1orf229Q6ZS94 237 aaPredicted RBP11.16□□□□□ -0.62
CCL28-202ENST00000489442 C1QL2Q7Z5L3 287 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 FAM90A1Q86YD7 464 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 PACRGLQ8N7B6 248 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 OR10Z1Q8NGY1 313 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 ZNF671Q8TAW3 534 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 HPSE2Q8WWQ2 592 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 RAB40AQ8WXH6 277 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 TMEM158Q8WZ71 300 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 TLNRD1Q9H1K6 362 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 ACOXLQ9NUZ1 547 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 EXOGQ9Y2C4 368 aaKnown RBP11.16□□□□□ -0.62
CCL28-202ENST00000489442 INSIG2Q9Y5U4 225 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 V9GYS6 101 aa11.16□□□□□ -0.62
CCL28-202ENST00000489442 A0A1B0GTI1 187 aa11.15□□□□□ -0.62
CCL28-202ENST00000489442 DHRS7CA6NNS2 312 aa11.15□□□□□ -0.62
CCL28-202ENST00000489442 RNF212BA8MTL3 300 aa11.15□□□□□ -0.62
CCL28-202ENST00000489442 SRRM5B3KS81 715 aa11.15□□□□□ -0.62
CCL28-202ENST00000489442 DLGAP1O14490 977 aa11.15□□□□□ -0.62
CCL28-202ENST00000489442 AKR7A2O43488 359 aa11.15□□□□□ -0.62
CCL28-202ENST00000489442 TCF21O43680 179 aa11.15□□□□□ -0.62
CCL28-202ENST00000489442 SERPINA3P01011 423 aa11.15□□□□□ -0.62
CCL28-202ENST00000489442 HTR1AP08908 422 aa11.15□□□□□ -0.62
CCL28-202ENST00000489442 UBCP0CG48 685 aaKnown RBP11.15□□□□□ -0.62
CCL28-202ENST00000489442 EPHA1P21709 976 aa11.15□□□□□ -0.62
CCL28-202ENST00000489442 PEX2P28328 305 aa11.15□□□□□ -0.62
CCL28-202ENST00000489442 OR12D2P58182 307 aa11.15□□□□□ -0.62
CCL28-202ENST00000489442 RAB40BQ12829 278 aa11.15□□□□□ -0.62
CCL28-202ENST00000489442 CDONQ4KMG0 1287 aa11.15□□□□□ -0.62
CCL28-202ENST00000489442 ARMCX4Q5H9R4 360 aa11.15□□□□□ -0.62
CCL28-202ENST00000489442 FAM76BQ5HYJ3 339 aa11.15□□□□□ -0.62
CCL28-202ENST00000489442 WDR38Q5JTN6 314 aa11.15□□□□□ -0.62
CCL28-202ENST00000489442 TEX36Q5VZQ5 186 aa11.15□□□□□ -0.62
CCL28-202ENST00000489442 KRT74Q7RTS7 529 aa11.15□□□□□ -0.62
CCL28-202ENST00000489442 SLC36A1Q7Z2H8 476 aa11.15□□□□□ -0.62
CCL28-202ENST00000489442 LHFPL3Q86UP9 236 aa11.15□□□□□ -0.62
CCL28-202ENST00000489442 DHRSXQ8N5I4 330 aa11.15□□□□□ -0.62
CCL28-202ENST00000489442 CCDC54Q8NEL0 328 aa11.15□□□□□ -0.62
CCL28-202ENST00000489442 OR14K1Q8NGZ2 314 aa11.15□□□□□ -0.62
CCL28-202ENST00000489442 NUDT16L1Q9BRJ7 211 aaKnown RBP11.15□□□□□ -0.62
CCL28-202ENST00000489442 RASSF4Q9H2L5 321 aa11.15□□□□□ -0.62
CCL28-202ENST00000489442 GPR173Q9NS66 373 aa11.15□□□□□ -0.62
CCL28-202ENST00000489442 IGHV2-70DA0A0C4DH43 119 aa11.14□□□□□ -0.63
CCL28-202ENST00000489442 J3QRE1 110 aa11.14□□□□□ -0.63
CCL28-202ENST00000489442 CCL1P22362 96 aa11.14□□□□□ -0.63
CCL28-202ENST00000489442 GLRA1P23415 457 aa11.14□□□□□ -0.63
CCL28-202ENST00000489442 GALEQ14376 348 aa11.14□□□□□ -0.63
CCL28-202ENST00000489442 TMEM244Q5VVB8 128 aa11.14□□□□□ -0.63
CCL28-202ENST00000489442 HAGHLQ6PII5 290 aaPredicted RBP11.14□□□□□ -0.63
CCL28-202ENST00000489442 ZNF841Q6ZN19 808 aa11.14□□□□□ -0.63
CCL28-202ENST00000489442 ZNF573Q86YE8 665 aa11.14□□□□□ -0.63
CCL28-202ENST00000489442 PRSS35Q8N3Z0 413 aa11.14□□□□□ -0.63
CCL28-202ENST00000489442 SETD9Q8NE22 299 aa11.14□□□□□ -0.63
CCL28-202ENST00000489442 OR5T2Q8NGG2 359 aa11.14□□□□□ -0.63
CCL28-202ENST00000489442 OR2G2Q8NGZ5 317 aa11.14□□□□□ -0.63
CCL28-202ENST00000489442 ZNF418Q8TF45 676 aaPredicted RBP11.14□□□□□ -0.63
CCL28-202ENST00000489442 ST8SIA4Q92187 359 aa11.14□□□□□ -0.63
CCL28-202ENST00000489442 C12orf43Q96C57 262 aaKnown RBP11.14□□□□□ -0.63
CCL28-202ENST00000489442 SEH1LQ96EE3 360 aa11.14□□□□□ -0.63
CCL28-202ENST00000489442 C4orf36Q96KX1 117 aa11.14□□□□□ -0.63
CCL28-202ENST00000489442 CCL13Q99616 98 aa11.14□□□□□ -0.63
CCL28-202ENST00000489442 MDFIQ99750 246 aa11.14□□□□□ -0.63
CCL28-202ENST00000489442 ALG8Q9BVK2 526 aa11.14□□□□□ -0.63
CCL28-202ENST00000489442 FGF23Q9GZV9 251 aaPredicted RBP11.14□□□□□ -0.63
CCL28-202ENST00000489442 WDR13Q9H1Z4 485 aa11.14□□□□□ -0.63
CCL28-202ENST00000489442 VCXQ9H320 206 aa11.14□□□□□ -0.63
CCL28-202ENST00000489442 OR51I2Q9H344 312 aa11.14□□□□□ -0.63
CCL28-202ENST00000489442 DCLRE1BQ9H816 532 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms