RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 ID3Q02535 119 aa7.39□□□□□ -1.23
VTI1A-207ENST00000489357 PLA2G7Q13093 441 aa7.39□□□□□ -1.23
VTI1A-207ENST00000489357 UNC119Q13432 240 aa7.39□□□□□ -1.23
VTI1A-207ENST00000489357 RNPS1Q15287 305 aaKnown RBP7.39□□□□□ -1.23
VTI1A-207ENST00000489357 CNN3Q15417 329 aaKnown RBP7.39□□□□□ -1.23
VTI1A-207ENST00000489357 GFOD2Q3B7J2 385 aa7.39□□□□□ -1.23
VTI1A-207ENST00000489357 VAX1Q5SQQ9 334 aa7.39□□□□□ -1.23
VTI1A-207ENST00000489357 OTPQ5XKR4 325 aa7.39□□□□□ -1.23
VTI1A-207ENST00000489357 NSUN5P2Q63ZY6 315 aa7.39□□□□□ -1.23
VTI1A-207ENST00000489357 MTFR2Q6P444 385 aa7.39□□□□□ -1.23
VTI1A-207ENST00000489357 IGFL2Q6UWQ7 119 aa7.39□□□□□ -1.23
VTI1A-207ENST00000489357 Q6ZTK2 550 aa7.39□□□□□ -1.23
VTI1A-207ENST00000489357 FAM57BQ71RH2 274 aa7.39□□□□□ -1.23
VTI1A-207ENST00000489357 ZNF843Q8N446 348 aa7.39□□□□□ -1.23
VTI1A-207ENST00000489357 PAQR4Q8N4S7 273 aaPredicted RBP7.39□□□□□ -1.23
VTI1A-207ENST00000489357 OR51S1Q8NGJ8 323 aa7.39□□□□□ -1.23
VTI1A-207ENST00000489357 OR2T35Q8NGX2 323 aa7.39□□□□□ -1.23
VTI1A-207ENST00000489357 HAS2Q92819 552 aa7.39□□□□□ -1.23
VTI1A-207ENST00000489357 GCDHQ92947 438 aaPredicted RBP7.39□□□□□ -1.23
VTI1A-207ENST00000489357 MRPS24Q96EL2 167 aaKnown RBP7.39□□□□□ -1.23
VTI1A-207ENST00000489357 C1orf147Q96MC9 270 aaPredicted RBP7.39□□□□□ -1.23
VTI1A-207ENST00000489357 SCGB3A2Q96PL1 93 aa7.39□□□□□ -1.23
VTI1A-207ENST00000489357 RBM24Q9BX46 236 aaKnown RBP7.39□□□□□ -1.23
VTI1A-207ENST00000489357 TM2D1Q9BX74 207 aa7.39□□□□□ -1.23
VTI1A-207ENST00000489357 TMEM59Q9BXS4 323 aa7.39□□□□□ -1.23
VTI1A-207ENST00000489357 SRXN1Q9BYN0 137 aa7.39□□□□□ -1.23
VTI1A-207ENST00000489357 EXO5Q9H790 373 aa7.39□□□□□ -1.23
VTI1A-207ENST00000489357 PCDHB16Q9NRJ7 776 aa7.39□□□□□ -1.23
VTI1A-207ENST00000489357 PLEK2Q9NYT0 353 aa7.39□□□□□ -1.23
VTI1A-207ENST00000489357 CRIM1Q9NZV1 1036 aa7.39□□□□□ -1.23
VTI1A-207ENST00000489357 MRPL15Q9P015 296 aaKnown RBP7.39□□□□□ -1.23
VTI1A-207ENST00000489357 MGAT4CQ9UBM8 478 aa7.39□□□□□ -1.23
VTI1A-207ENST00000489357 ZNF69Q9UC07 566 aa7.39□□□□□ -1.23
VTI1A-207ENST00000489357 BOD1L1Q8NFC6 3051 aa7.39□□□□□ -1.23
VTI1A-207ENST00000489357 SMG1Q96Q15 3661 aaKnown RBP7.38□□□□□ -1.23
VTI1A-207ENST00000489357 SHANK1Q9Y566 2161 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 KLRC4-KLRK1H3BQV0 150 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 MASP2O00187 686 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 TPD52L2O43399 206 aaKnown RBP7.38□□□□□ -1.23
VTI1A-207ENST00000489357 XRCC2O43543 280 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 CXCL13O43927 109 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 CDC14BO60729 498 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 SYNGR4O95473 234 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 IFNA7P01567 189 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 OPN1LWP04000 364 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 AMY2AP04746 511 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 FAM87AP0C7U9 286 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 HIST1H1DP16402 221 aaKnown RBP7.38□□□□□ -1.23
VTI1A-207ENST00000489357 ZNF708P17019 499 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 TCEA1P23193 301 aaKnown RBP7.38□□□□□ -1.23
VTI1A-207ENST00000489357 CPT2P23786 658 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 ECI1P42126 302 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 PTGFRP43088 359 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 RAD52P43351 418 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 SLC6A9P48067 706 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 GNG2P59768 71 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 SRSF4Q08170 494 aaKnown RBP7.38□□□□□ -1.23
VTI1A-207ENST00000489357 FGL1Q08830 312 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 KISS1Q15726 138 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 CDNFQ49AH0 187 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 PHYHD1Q5SRE7 291 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 B3GNTL1Q67FW5 361 aaPredicted RBP7.38□□□□□ -1.23
VTI1A-207ENST00000489357 GLIPR1L1Q6UWM5 242 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 IGFL3Q6UXB1 125 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 IDO2Q6ZQW0 420 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 YRDCQ86U90 279 aaKnown RBP7.38□□□□□ -1.23
VTI1A-207ENST00000489357 ZNF101Q8IZC7 436 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 BPIFB2Q8N4F0 458 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 OR2AK2Q8NG84 335 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 OR1F12Q8NHA8 337 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 RAB3CQ96E17 227 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 S100A13Q99584 98 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 FOXB1Q99853 325 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 PRDM14Q9GZV8 571 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 LPAR5Q9H1C0 372 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 OPA3Q9H6K4 179 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 ZNF552Q9H707 407 aaPredicted RBP7.38□□□□□ -1.23
VTI1A-207ENST00000489357 BCO1Q9HAY6 547 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 ACKR4Q9NPB9 350 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 IFT46Q9NQC8 304 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 PLSCR3Q9NRY6 295 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 DEPPQ9NTK1 212 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 B3GNT2Q9NY97 397 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 ZNF224Q9NZL3 707 aa7.38□□□□□ -1.23
VTI1A-207ENST00000489357 MCTS1Q9ULC4 181 aaKnown RBP7.38□□□□□ -1.23
VTI1A-207ENST00000489357 HELZ2Q9BYK8 2649 aaKnown RBP7.37□□□□□ -1.23
VTI1A-207ENST00000489357 ZNF462Q96JM2 2506 aa7.37□□□□□ -1.23
VTI1A-207ENST00000489357 OR14I1A6ND48 311 aa7.37□□□□□ -1.23
VTI1A-207ENST00000489357 TMEM235A6NFC5 223 aa7.37□□□□□ -1.23
VTI1A-207ENST00000489357 ARGFXA6NJG6 315 aa7.37□□□□□ -1.23
VTI1A-207ENST00000489357 PRSS44E7EML9 344 aa7.37□□□□□ -1.23
VTI1A-207ENST00000489357 H3BSH0 61 aa7.37□□□□□ -1.23
VTI1A-207ENST00000489357 K7EM74 188 aa7.37□□□□□ -1.23
VTI1A-207ENST00000489357 MFNGO00587 321 aa7.37□□□□□ -1.23
VTI1A-207ENST00000489357 AKR7A2O43488 359 aa7.37□□□□□ -1.23
VTI1A-207ENST00000489357 NME2P1O60361 137 aa7.37□□□□□ -1.23
VTI1A-207ENST00000489357 LMX1BO60663 402 aa7.37□□□□□ -1.23
VTI1A-207ENST00000489357 TRAPPC6AO75865 159 aa7.37□□□□□ -1.23
VTI1A-207ENST00000489357 RLN1P04808 185 aa7.37□□□□□ -1.23
VTI1A-207ENST00000489357 IFNA6P05013 189 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms