RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 FAM106CPP0CH98 169 aa8.98□□□□□ -0.97
HDAC6-233ENST00000489352 IFI30P13284 250 aa8.98□□□□□ -0.97
HDAC6-233ENST00000489352 PPIBP23284 216 aaKnown RBP8.98□□□□□ -0.97
HDAC6-233ENST00000489352 RPL14P50914 215 aaKnown RBP8.98□□□□□ -0.97
HDAC6-233ENST00000489352 GPR50Q13585 617 aa8.98□□□□□ -0.97
HDAC6-233ENST00000489352 DNM1P34Q6PK57 102 aa8.98□□□□□ -0.97
HDAC6-233ENST00000489352 LINC00346Q8IVM7 164 aa8.98□□□□□ -0.97
HDAC6-233ENST00000489352 ZNF561Q8N587 486 aa8.98□□□□□ -0.97
HDAC6-233ENST00000489352 OR1N2Q8NGR9 330 aa8.98□□□□□ -0.97
HDAC6-233ENST00000489352 SDSLQ96GA7 329 aa8.98□□□□□ -0.97
HDAC6-233ENST00000489352 Q96M85 177 aa8.98□□□□□ -0.97
HDAC6-233ENST00000489352 TMED9Q9BVK6 235 aa8.98□□□□□ -0.97
HDAC6-233ENST00000489352 PAPOLGQ9BWT3 736 aaKnown RBP8.98□□□□□ -0.97
HDAC6-233ENST00000489352 CHCHD3Q9NX63 227 aaKnown RBP8.98□□□□□ -0.97
HDAC6-233ENST00000489352 DPM3Q9P2X0 92 aa8.98□□□□□ -0.97
HDAC6-233ENST00000489352 PKHD1P08F94 4074 aa8.98□□□□□ -0.97
HDAC6-233ENST00000489352 DSCAML1Q8TD84 2053 aa8.98□□□□□ -0.97
HDAC6-233ENST00000489352 HTR3EA5X5Y0 456 aa8.97□□□□□ -0.97
HDAC6-233ENST00000489352 TMEM210A6NLX4 147 aa8.97□□□□□ -0.97
HDAC6-233ENST00000489352 M0QX08 132 aa8.97□□□□□ -0.97
HDAC6-233ENST00000489352 ZNF728P0DKX0 622 aa8.97□□□□□ -0.97
HDAC6-233ENST00000489352 MNDAP41218 407 aa8.97□□□□□ -0.97
HDAC6-233ENST00000489352 ZNF616Q08AN1 781 aa8.97□□□□□ -0.97
HDAC6-233ENST00000489352 ANKDD1AQ495B1 522 aa8.97□□□□□ -0.97
HDAC6-233ENST00000489352 SLC36A3Q495N2 470 aa8.97□□□□□ -0.97
HDAC6-233ENST00000489352 MESTQ5EB52 335 aa8.97□□□□□ -0.97
HDAC6-233ENST00000489352 LRIF1Q5T3J3 769 aa8.97□□□□□ -0.97
HDAC6-233ENST00000489352 GPR139Q6DWJ6 353 aa8.97□□□□□ -0.97
HDAC6-233ENST00000489352 CCDC80Q76M96 950 aa8.97□□□□□ -0.97
HDAC6-233ENST00000489352 TSPYL5Q86VY4 417 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-233ENST00000489352 Q8N1Y9 231 aa8.97□□□□□ -0.97
HDAC6-233ENST00000489352 FTMTQ8N4E7 242 aa8.97□□□□□ -0.97
HDAC6-233ENST00000489352 FAM71E2Q8N5Q1 922 aa8.97□□□□□ -0.97
HDAC6-233ENST00000489352 ZNF676Q8N7Q3 588 aa8.97□□□□□ -0.97
HDAC6-233ENST00000489352 OR4D11Q8NGI4 311 aa8.97□□□□□ -0.97
HDAC6-233ENST00000489352 APOPT1Q96IL0 206 aa8.97□□□□□ -0.97
HDAC6-233ENST00000489352 CLEC7AQ9BXN2 247 aa8.97□□□□□ -0.97
HDAC6-233ENST00000489352 PAIP1Q9H074 479 aaKnown RBP8.97□□□□□ -0.97
HDAC6-233ENST00000489352 NUAK2Q9H093 628 aa8.97□□□□□ -0.97
HDAC6-233ENST00000489352 TMEM38AQ9H6F2 299 aa8.97□□□□□ -0.97
HDAC6-233ENST00000489352 CORO2BQ9UQ03 480 aa8.97□□□□□ -0.97
HDAC6-233ENST00000489352 ADAM18Q9Y3Q7 739 aa8.97□□□□□ -0.97
HDAC6-233ENST00000489352 IGHV2-26A0A0B4J1V2 119 aa8.96□□□□□ -0.98
HDAC6-233ENST00000489352 EVPLLA8MZ36 301 aa8.96□□□□□ -0.98
HDAC6-233ENST00000489352 XRCC2O43543 280 aa8.96□□□□□ -0.98
HDAC6-233ENST00000489352 SERPINA1P01009 418 aa8.96□□□□□ -0.98
HDAC6-233ENST00000489352 IDO1P14902 403 aa8.96□□□□□ -0.98
HDAC6-233ENST00000489352 CRABP1P29762 137 aa8.96□□□□□ -0.98
HDAC6-233ENST00000489352 CEACAM3P40198 252 aa8.96□□□□□ -0.98
HDAC6-233ENST00000489352 SLC9A3P48764 834 aa8.96□□□□□ -0.98
HDAC6-233ENST00000489352 POLR2JP52435 117 aaKnown RBP8.96□□□□□ -0.98
HDAC6-233ENST00000489352 FOXE3Q13461 319 aa8.96□□□□□ -0.98
HDAC6-233ENST00000489352 KRR1Q13601 381 aaKnown RBP8.96□□□□□ -0.98
HDAC6-233ENST00000489352 SNCBQ16143 134 aa8.96□□□□□ -0.98
HDAC6-233ENST00000489352 DRAM2Q6UX65 266 aa8.96□□□□□ -0.98
HDAC6-233ENST00000489352 MAVSQ7Z434 540 aa8.96□□□□□ -0.98
HDAC6-233ENST00000489352 KIRREL3Q8IZU9 778 aa8.96□□□□□ -0.98
HDAC6-233ENST00000489352 LRRC75AQ8NAA5 344 aa8.96□□□□□ -0.98
HDAC6-233ENST00000489352 GPR32P1Q8NGA4 272 aa8.96□□□□□ -0.98
HDAC6-233ENST00000489352 DCUN1D4Q92564 292 aa8.96□□□□□ -0.98
HDAC6-233ENST00000489352 GTF2H4Q92759 462 aa8.96□□□□□ -0.98
HDAC6-233ENST00000489352 OR4C12Q96R67 309 aa8.96□□□□□ -0.98
HDAC6-233ENST00000489352 NMNAT1Q9HAN9 279 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-233ENST00000489352 KRCC1Q9NPI7 259 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-233ENST00000489352 KIAA1456Q9P272 454 aa8.96□□□□□ -0.98
HDAC6-233ENST00000489352 RIMS3Q9UJD0 308 aa8.96□□□□□ -0.98
HDAC6-233ENST00000489352 ZNF222Q9UK12 451 aa8.96□□□□□ -0.98
HDAC6-233ENST00000489352 RAP2CQ9Y3L5 183 aa8.96□□□□□ -0.98
HDAC6-233ENST00000489352 MEX3AA1L020 520 aaKnown RBP8.95□□□□□ -0.98
HDAC6-233ENST00000489352 RFPL4AA6NLU0 287 aa8.95□□□□□ -0.98
HDAC6-233ENST00000489352 LEUTXA8MZ59 168 aa8.95□□□□□ -0.98
HDAC6-233ENST00000489352 C12orf77C9JDV5 145 aa8.95□□□□□ -0.98
HDAC6-233ENST00000489352 RFPL4AL1F8VTS6 287 aa8.95□□□□□ -0.98
HDAC6-233ENST00000489352 AP4M1O00189 453 aa8.95□□□□□ -0.98
HDAC6-233ENST00000489352 TBX1O43435 398 aa8.95□□□□□ -0.98
HDAC6-233ENST00000489352 ITM2AO43736 263 aa8.95□□□□□ -0.98
HDAC6-233ENST00000489352 HLA-DQA2P01906 255 aa8.95□□□□□ -0.98
HDAC6-233ENST00000489352 ELANEP08246 267 aa8.95□□□□□ -0.98
HDAC6-233ENST00000489352 CD14P08571 375 aa8.95□□□□□ -0.98
HDAC6-233ENST00000489352 SPARCP09486 303 aa8.95□□□□□ -0.98
HDAC6-233ENST00000489352 EDDM3BP56851 147 aa8.95□□□□□ -0.98
HDAC6-233ENST00000489352 TAF13Q15543 124 aa8.95□□□□□ -0.98
HDAC6-233ENST00000489352 TIGD6Q17RP2 521 aa8.95□□□□□ -0.98
HDAC6-233ENST00000489352 LGALS9CQ6DKI2 356 aa8.95□□□□□ -0.98
HDAC6-233ENST00000489352 SLC18B1Q6NT16 456 aa8.95□□□□□ -0.98
HDAC6-233ENST00000489352 ACSM6Q6P461 480 aa8.95□□□□□ -0.98
HDAC6-233ENST00000489352 LINC00336Q6ZUF6 198 aa8.95□□□□□ -0.98
HDAC6-233ENST00000489352 ZNF671Q8TAW3 534 aa8.95□□□□□ -0.98
HDAC6-233ENST00000489352 LZICQ8WZA0 190 aa8.95□□□□□ -0.98
HDAC6-233ENST00000489352 HIST1H2AAQ96QV6 131 aa8.95□□□□□ -0.98
HDAC6-233ENST00000489352 HIPK2Q9H2X6 1198 aa8.95□□□□□ -0.98
HDAC6-233ENST00000489352 SP140LQ9H930 580 aa8.95□□□□□ -0.98
HDAC6-233ENST00000489352 PYCARDQ9ULZ3 195 aa8.95□□□□□ -0.98
HDAC6-233ENST00000489352 OR6C68A6NDL8 312 aa8.94□□□□□ -0.98
HDAC6-233ENST00000489352 EFCAB9A8MZ26 197 aa8.94□□□□□ -0.98
HDAC6-233ENST00000489352 HSPA12AO43301 675 aa8.94□□□□□ -0.98
HDAC6-233ENST00000489352 BRI3O95415 125 aa8.94□□□□□ -0.98
HDAC6-233ENST00000489352 BPGMP07738 259 aa8.94□□□□□ -0.98
HDAC6-233ENST00000489352 TROVE2P10155 538 aaKnown RBP eCLIP8.94□□□□□ -0.98
HDAC6-233ENST00000489352 PRDX2P32119 198 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms