RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 COMPP49747 757 aaPredicted RBP11.59□□□□□ -0.55
VTI1A-206ENST00000489142 DLX1P56177 255 aa11.59□□□□□ -0.55
VTI1A-206ENST00000489142 ARF6P62330 175 aa11.59□□□□□ -0.55
VTI1A-206ENST00000489142 SNCBQ16143 134 aa11.59□□□□□ -0.55
VTI1A-206ENST00000489142 ZNF829Q3KNS6 432 aaPredicted RBP11.59□□□□□ -0.55
VTI1A-206ENST00000489142 C9orf139Q6ZV77 190 aa11.59□□□□□ -0.55
VTI1A-206ENST00000489142 MOB3CQ70IA8 216 aa11.59□□□□□ -0.55
VTI1A-206ENST00000489142 ASB17Q8WXJ9 295 aa11.59□□□□□ -0.55
VTI1A-206ENST00000489142 LHX4Q969G2 390 aa11.59□□□□□ -0.55
VTI1A-206ENST00000489142 WDFY2Q96P53 400 aa11.59□□□□□ -0.55
VTI1A-206ENST00000489142 SIRPDQ9H106 197 aa11.59□□□□□ -0.55
VTI1A-206ENST00000489142 PIGLQ9Y2B2 252 aa11.59□□□□□ -0.55
VTI1A-206ENST00000489142 TMEM14AQ9Y6G1 99 aa11.59□□□□□ -0.55
VTI1A-206ENST00000489142 NBEAL1Q6ZS30 2694 aa11.58□□□□□ -0.56
VTI1A-206ENST00000489142 SLC22A31A6NKX4 558 aa11.58□□□□□ -0.56
VTI1A-206ENST00000489142 TMEM210A6NLX4 147 aa11.58□□□□□ -0.56
VTI1A-206ENST00000489142 ZNF732B4DXR9 585 aa11.58□□□□□ -0.56
VTI1A-206ENST00000489142 LOC110117498-PIK3R3F6TDL0 507 aa11.58□□□□□ -0.56
VTI1A-206ENST00000489142 HOXA3O43365 443 aaPredicted RBP11.58□□□□□ -0.56
VTI1A-206ENST00000489142 ZNF254O75437 659 aa11.58□□□□□ -0.56
VTI1A-206ENST00000489142 RPP14O95059 124 aaKnown RBP11.58□□□□□ -0.56
VTI1A-206ENST00000489142 TTRP02766 147 aa11.58□□□□□ -0.56
VTI1A-206ENST00000489142 DCTDP32321 178 aa11.58□□□□□ -0.56
VTI1A-206ENST00000489142 MTNR1AP48039 350 aa11.58□□□□□ -0.56
VTI1A-206ENST00000489142 ODF4Q2M2E3 257 aa11.58□□□□□ -0.56
VTI1A-206ENST00000489142 BCL2L15Q5TBC7 163 aa11.58□□□□□ -0.56
VTI1A-206ENST00000489142 METTL11BQ5VVY1 283 aa11.58□□□□□ -0.56
VTI1A-206ENST00000489142 PLCXD3Q63HM9 321 aa11.58□□□□□ -0.56
VTI1A-206ENST00000489142 STUMQ69YW2 141 aa11.58□□□□□ -0.56
VTI1A-206ENST00000489142 DEGS2Q6QHC5 323 aa11.58□□□□□ -0.56
VTI1A-206ENST00000489142 THAP5Q7Z6K1 395 aa11.58□□□□□ -0.56
VTI1A-206ENST00000489142 BATF2Q8N1L9 274 aa11.58□□□□□ -0.56
VTI1A-206ENST00000489142 PNLDC1Q8NA58 520 aaKnown RBP11.58□□□□□ -0.56
VTI1A-206ENST00000489142 H1FXQ92522 213 aaKnown RBP11.58□□□□□ -0.56
VTI1A-206ENST00000489142 CENPNQ96H22 339 aaPredicted RBP11.58□□□□□ -0.56
VTI1A-206ENST00000489142 HIST1H2AAQ96QV6 131 aa11.58□□□□□ -0.56
VTI1A-206ENST00000489142 ABCB9Q9NP78 766 aa11.58□□□□□ -0.56
VTI1A-206ENST00000489142 HAO2Q9NYQ3 351 aa11.58□□□□□ -0.56
VTI1A-206ENST00000489142 ONECUT1Q9UBC0 465 aa11.58□□□□□ -0.56
VTI1A-206ENST00000489142 KAAG1Q9UBP8 84 aa11.58□□□□□ -0.56
VTI1A-206ENST00000489142 NUFIP1Q9UHK0 495 aaKnown RBP11.58□□□□□ -0.56
VTI1A-206ENST00000489142 MRM2Q9UI43 246 aaKnown RBP11.58□□□□□ -0.56
VTI1A-206ENST00000489142 RPUSD1Q9UJJ7 312 aaKnown RBP11.58□□□□□ -0.56
VTI1A-206ENST00000489142 ZNF391Q9UJN7 358 aa11.58□□□□□ -0.56
VTI1A-206ENST00000489142 CENPVL3A0A0U1RRI6 287 aa11.57□□□□□ -0.56
VTI1A-206ENST00000489142 ACOD1A6NK06 481 aa11.57□□□□□ -0.56
VTI1A-206ENST00000489142 ZNF670-ZNF695F2Z2N8 137 aa11.57□□□□□ -0.56
VTI1A-206ENST00000489142 P2RY10O00398 339 aa11.57□□□□□ -0.56
VTI1A-206ENST00000489142 NDUFB3O43676 98 aa11.57□□□□□ -0.56
VTI1A-206ENST00000489142 IGLV3-1P01715 115 aa11.57□□□□□ -0.56
VTI1A-206ENST00000489142 HKR1P10072 659 aa11.57□□□□□ -0.56
VTI1A-206ENST00000489142 RIPPLY1Q0D2K3 151 aa11.57□□□□□ -0.56
VTI1A-206ENST00000489142 KPNB1Q14974 876 aaKnown RBP11.57□□□□□ -0.56
VTI1A-206ENST00000489142 CEACAM21Q3KPI0 293 aa11.57□□□□□ -0.56
VTI1A-206ENST00000489142 ASRGL1Q7L266 308 aa11.57□□□□□ -0.56
VTI1A-206ENST00000489142 SLC36A1Q7Z2H8 476 aa11.57□□□□□ -0.56
VTI1A-206ENST00000489142 GID4Q8IVV7 300 aa11.57□□□□□ -0.56
VTI1A-206ENST00000489142 OR10Z1Q8NGY1 313 aa11.57□□□□□ -0.56
VTI1A-206ENST00000489142 ZDHHC16Q969W1 377 aa11.57□□□□□ -0.56
VTI1A-206ENST00000489142 SLC25A28Q96A46 364 aa11.57□□□□□ -0.56
VTI1A-206ENST00000489142 ZNF488Q96MN9 340 aa11.57□□□□□ -0.56
VTI1A-206ENST00000489142 GAFA1Q96PS6 74 aa11.57□□□□□ -0.56
VTI1A-206ENST00000489142 RAB3IPQ96QF0 476 aaPredicted RBP11.57□□□□□ -0.56
VTI1A-206ENST00000489142 OSBPL10Q9BXB5 764 aa11.57□□□□□ -0.56
VTI1A-206ENST00000489142 GABARAPL3Q9BY60 117 aa11.57□□□□□ -0.56
VTI1A-206ENST00000489142 OR51I2Q9H344 312 aa11.57□□□□□ -0.56
VTI1A-206ENST00000489142 ELL3Q9HB65 397 aaPredicted RBP11.57□□□□□ -0.56
VTI1A-206ENST00000489142 GPR173Q9NS66 373 aa11.57□□□□□ -0.56
VTI1A-206ENST00000489142 CLN6Q9NWW5 311 aa11.57□□□□□ -0.56
VTI1A-206ENST00000489142 OR52A1Q9UKL2 312 aa11.57□□□□□ -0.56
VTI1A-206ENST00000489142 SLC22A13Q9Y226 551 aa11.57□□□□□ -0.56
VTI1A-206ENST00000489142 PCDHGB1Q9Y5G3 927 aa11.57□□□□□ -0.56
VTI1A-206ENST00000489142 R4GMQ9 66 aa11.57□□□□□ -0.56
VTI1A-206ENST00000489142 A0A1W2PQL4 384 aaPredicted RBP11.56□□□□□ -0.56
VTI1A-206ENST00000489142 NKX6-3A6NJ46 265 aa11.56□□□□□ -0.56
VTI1A-206ENST00000489142 DHRS3O75911 302 aa11.56□□□□□ -0.56
VTI1A-206ENST00000489142 LIPFP07098 398 aa11.56□□□□□ -0.56
VTI1A-206ENST00000489142 RNASE1P07998 156 aaKnown RBP11.56□□□□□ -0.56
VTI1A-206ENST00000489142 GLRA1P23415 457 aa11.56□□□□□ -0.56
VTI1A-206ENST00000489142 OMGP23515 440 aa11.56□□□□□ -0.56
VTI1A-206ENST00000489142 GABRA2P47869 451 aa11.56□□□□□ -0.56
VTI1A-206ENST00000489142 GNG3P63215 75 aa11.56□□□□□ -0.56
VTI1A-206ENST00000489142 DGUOKQ16854 277 aa11.56□□□□□ -0.56
VTI1A-206ENST00000489142 FAM76BQ5HYJ3 339 aa11.56□□□□□ -0.56
VTI1A-206ENST00000489142 HAGHLQ6PII5 290 aaPredicted RBP11.56□□□□□ -0.56
VTI1A-206ENST00000489142 VMO1Q7Z5L0 202 aa11.56□□□□□ -0.56
VTI1A-206ENST00000489142 YIPF7Q8N8F6 280 aa11.56□□□□□ -0.56
VTI1A-206ENST00000489142 OR10H4Q8NGA5 316 aa11.56□□□□□ -0.56
VTI1A-206ENST00000489142 UBE2FQ969M7 185 aa11.56□□□□□ -0.56
VTI1A-206ENST00000489142 C12orf43Q96C57 262 aaKnown RBP11.56□□□□□ -0.56
VTI1A-206ENST00000489142 SIRT7Q9NRC8 400 aa11.56□□□□□ -0.56
VTI1A-206ENST00000489142 NLKQ9UBE8 527 aa11.56□□□□□ -0.56
VTI1A-206ENST00000489142 ENOPH1Q9UHY7 261 aa11.56□□□□□ -0.56
VTI1A-206ENST00000489142 ENPP5Q9UJA9 477 aa11.56□□□□□ -0.56
VTI1A-206ENST00000489142 IGHV1-69DA0A0B4J2H0 117 aa11.55□□□□□ -0.56
VTI1A-206ENST00000489142 A0A1B0GTI1 187 aa11.55□□□□□ -0.56
VTI1A-206ENST00000489142 A0A1W2PRD5 423 aa11.55□□□□□ -0.56
VTI1A-206ENST00000489142 A0A1W2PRF3 423 aa11.55□□□□□ -0.56
VTI1A-206ENST00000489142 A0A1W2PRM7 423 aa11.55□□□□□ -0.56
VTI1A-206ENST00000489142 H3BNX3 289 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms