RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 ALPLP05186 524 aa20.69■□□□□ 0.9
HMGN1-217ENST00000489072 SFTPBP07988 381 aa20.69■□□□□ 0.9
HMGN1-217ENST00000489072 EGR3Q06889 387 aa20.69■□□□□ 0.9
HMGN1-217ENST00000489072 RIPPLY1Q0D2K3 151 aa20.69■□□□□ 0.9
HMGN1-217ENST00000489072 STUMQ69YW2 141 aa20.69■□□□□ 0.9
HMGN1-217ENST00000489072 RBMS3Q6XE24 437 aaKnown RBP20.69■□□□□ 0.9
HMGN1-217ENST00000489072 BTN2A1Q7KYR7 527 aa20.69■□□□□ 0.9
HMGN1-217ENST00000489072 FAM216BQ8N7L0 139 aa20.69■□□□□ 0.9
HMGN1-217ENST00000489072 OR5T2Q8NGG2 359 aa20.69■□□□□ 0.9
HMGN1-217ENST00000489072 OR8J1Q8NGP2 316 aa20.69■□□□□ 0.9
HMGN1-217ENST00000489072 ITFG2Q969R8 447 aa20.69■□□□□ 0.9
HMGN1-217ENST00000489072 EME1Q96AY2 570 aa20.69■□□□□ 0.9
HMGN1-217ENST00000489072 DUX5Q96PT3 197 aa20.69■□□□□ 0.9
HMGN1-217ENST00000489072 HIST1H2AAQ96QV6 131 aa20.69■□□□□ 0.9
HMGN1-217ENST00000489072 MOB1AQ9H8S9 216 aa20.69■□□□□ 0.9
HMGN1-217ENST00000489072 PIGLQ9Y2B2 252 aa20.69■□□□□ 0.9
HMGN1-217ENST00000489072 DNAJC9-AS1A6NH13 148 aa20.68■□□□□ 0.9
HMGN1-217ENST00000489072 ZNF879B4DU55 563 aa20.68■□□□□ 0.9
HMGN1-217ENST00000489072 AKR7A2O43488 359 aa20.68■□□□□ 0.9
HMGN1-217ENST00000489072 MMP9P14780 707 aa20.68■□□□□ 0.9
HMGN1-217ENST00000489072 CEACAM21Q3KPI0 293 aa20.68■□□□□ 0.9
HMGN1-217ENST00000489072 BCL2L15Q5TBC7 163 aa20.68■□□□□ 0.9
HMGN1-217ENST00000489072 THAP5Q7Z6K1 395 aa20.68■□□□□ 0.9
HMGN1-217ENST00000489072 ELMOD2Q8IZ81 293 aa20.68■□□□□ 0.9
HMGN1-217ENST00000489072 ST8SIA4Q92187 359 aa20.68■□□□□ 0.9
HMGN1-217ENST00000489072 UBE2FQ969M7 185 aa20.68■□□□□ 0.9
HMGN1-217ENST00000489072 C12orf43Q96C57 262 aaKnown RBP20.68■□□□□ 0.9
HMGN1-217ENST00000489072 RAB3IPQ96QF0 476 aaPredicted RBP20.68■□□□□ 0.9
HMGN1-217ENST00000489072 TBX15Q96SF7 602 aa20.68■□□□□ 0.9
HMGN1-217ENST00000489072 PCGF1Q9BSM1 259 aa20.68■□□□□ 0.9
HMGN1-217ENST00000489072 OR51I2Q9H344 312 aa20.68■□□□□ 0.9
HMGN1-217ENST00000489072 SNTG1Q9NSN8 517 aa20.68■□□□□ 0.9
HMGN1-217ENST00000489072 OR52A1Q9UKL2 312 aa20.68■□□□□ 0.9
HMGN1-217ENST00000489072 A0A1B0GTI1 187 aa20.67■□□□□ 0.9
HMGN1-217ENST00000489072 A0A1W2PQL4 384 aaPredicted RBP20.67■□□□□ 0.9
HMGN1-217ENST00000489072 TMEM89A2RUT3 159 aa20.67■□□□□ 0.9
HMGN1-217ENST00000489072 ZNF732B4DXR9 585 aa20.67■□□□□ 0.9
HMGN1-217ENST00000489072 EI24O14681 340 aa20.67■□□□□ 0.9
HMGN1-217ENST00000489072 RHBDL1O75783 438 aa20.67■□□□□ 0.9
HMGN1-217ENST00000489072 DHRS3O75911 302 aa20.67■□□□□ 0.9
HMGN1-217ENST00000489072 TFF1P04155 84 aa20.67■□□□□ 0.9
HMGN1-217ENST00000489072 LIPFP07098 398 aa20.67■□□□□ 0.9
HMGN1-217ENST00000489072 GNG3P63215 75 aa20.67■□□□□ 0.9
HMGN1-217ENST00000489072 ZBTB37Q5TC79 503 aa20.67■□□□□ 0.9
HMGN1-217ENST00000489072 ZFP1Q6P2D0 407 aa20.67■□□□□ 0.9
HMGN1-217ENST00000489072 C12orf54Q6X4T0 127 aa20.67■□□□□ 0.9
HMGN1-217ENST00000489072 BRD3OSQ6XYD6 125 aa20.67■□□□□ 0.9
HMGN1-217ENST00000489072 MOB3CQ70IA8 216 aa20.67■□□□□ 0.9
HMGN1-217ENST00000489072 USE1Q9NZ43 259 aa20.67■□□□□ 0.9
HMGN1-217ENST00000489072 SLC22A13Q9Y226 551 aa20.67■□□□□ 0.9
HMGN1-217ENST00000489072 RPP14O95059 124 aaKnown RBP20.66■□□□□ 0.9
HMGN1-217ENST00000489072 OR2T7P0C7T2 308 aa20.66■□□□□ 0.9
HMGN1-217ENST00000489072 SELLP14151 372 aa20.66■□□□□ 0.9
HMGN1-217ENST00000489072 TGM4P49221 684 aa20.66■□□□□ 0.9
HMGN1-217ENST00000489072 COMPP49747 757 aaPredicted RBP20.66■□□□□ 0.9
HMGN1-217ENST00000489072 BAMBIQ13145 260 aa20.66■□□□□ 0.9
HMGN1-217ENST00000489072 ZNF684Q5T5D7 378 aa20.66■□□□□ 0.9
HMGN1-217ENST00000489072 ATPAF1Q5TC12 328 aaPredicted RBP20.66■□□□□ 0.9
HMGN1-217ENST00000489072 PLCXD3Q63HM9 321 aa20.66■□□□□ 0.9
HMGN1-217ENST00000489072 SLC36A1Q7Z2H8 476 aa20.66■□□□□ 0.9
HMGN1-217ENST00000489072 YIPF7Q8N8F6 280 aa20.66■□□□□ 0.9
HMGN1-217ENST00000489072 PNLDC1Q8NA58 520 aaKnown RBP20.66■□□□□ 0.9
HMGN1-217ENST00000489072 OR5A2Q8NGI9 324 aa20.66■□□□□ 0.9
HMGN1-217ENST00000489072 OR2T27Q8NH04 317 aa20.66■□□□□ 0.9
HMGN1-217ENST00000489072 GCDHQ92947 438 aaPredicted RBP20.66■□□□□ 0.9
HMGN1-217ENST00000489072 WDFY2Q96P53 400 aa20.66■□□□□ 0.9
HMGN1-217ENST00000489072 SIRPDQ9H106 197 aa20.66■□□□□ 0.9
HMGN1-217ENST00000489072 DNAJB11Q9UBS4 358 aa20.66■□□□□ 0.9
HMGN1-217ENST00000489072 ENPP5Q9UJA9 477 aa20.66■□□□□ 0.9
HMGN1-217ENST00000489072 RPUSD1Q9UJJ7 312 aaKnown RBP20.66■□□□□ 0.9
HMGN1-217ENST00000489072 SNX5Q9Y5X3 404 aa20.66■□□□□ 0.9
HMGN1-217ENST00000489072 V9GYS6 101 aa20.66■□□□□ 0.9
HMGN1-217ENST00000489072 MDFIC2A0A1B0GVS7 189 aa20.65■□□□□ 0.9
HMGN1-217ENST00000489072 E9PQ18 207 aa20.65■□□□□ 0.9
HMGN1-217ENST00000489072 P2RY10O00398 339 aa20.65■□□□□ 0.9
HMGN1-217ENST00000489072 MTRF1O75570 445 aaKnown RBP20.65■□□□□ 0.9
HMGN1-217ENST00000489072 TOX4O94842 621 aa20.65■□□□□ 0.9
HMGN1-217ENST00000489072 ECDO95905 644 aaPredicted RBP20.65■□□□□ 0.9
HMGN1-217ENST00000489072 KRT8P05787 483 aa20.65■□□□□ 0.9
HMGN1-217ENST00000489072 PRTN3P24158 256 aa20.65■□□□□ 0.9
HMGN1-217ENST00000489072 CDC42P60953 191 aa20.65■□□□□ 0.9
HMGN1-217ENST00000489072 IKZF1Q13422 519 aa20.65■□□□□ 0.9
HMGN1-217ENST00000489072 C11orf91Q3C1V1 193 aa20.65■□□□□ 0.9
HMGN1-217ENST00000489072 OR10H4Q8NGA5 316 aa20.65■□□□□ 0.9
HMGN1-217ENST00000489072 NBEAL1Q6ZS30 2694 aa20.65■□□□□ 0.9
HMGN1-217ENST00000489072 OR5B21A6NL26 309 aa20.64■□□□□ 0.89
HMGN1-217ENST00000489072 NRASP01111 189 aa20.64■□□□□ 0.89
HMGN1-217ENST00000489072 MTNR1AP48039 350 aa20.64■□□□□ 0.89
HMGN1-217ENST00000489072 ALDH3A2P51648 485 aa20.64■□□□□ 0.89
HMGN1-217ENST00000489072 ARF6P62330 175 aa20.64■□□□□ 0.89
HMGN1-217ENST00000489072 TMED1Q13445 227 aa20.64■□□□□ 0.89
HMGN1-217ENST00000489072 ZIK1Q3SY52 487 aaPredicted RBP20.64■□□□□ 0.89
HMGN1-217ENST00000489072 GPR157Q5UAW9 335 aa20.64■□□□□ 0.89
HMGN1-217ENST00000489072 RUSC1-AS1Q66K80 236 aa20.64■□□□□ 0.89
HMGN1-217ENST00000489072 TMEM42Q69YG0 159 aa20.64■□□□□ 0.89
HMGN1-217ENST00000489072 Q6ZSR3 168 aa20.64■□□□□ 0.89
HMGN1-217ENST00000489072 OR14K1Q8NGZ2 314 aa20.64■□□□□ 0.89
HMGN1-217ENST00000489072 ANGPTL6Q8NI99 470 aa20.64■□□□□ 0.89
HMGN1-217ENST00000489072 AQP3Q92482 292 aa20.64■□□□□ 0.89
HMGN1-217ENST00000489072 HRASLS5Q96KN8 279 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms