RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 GABARAPL3Q9BY60 117 aa4.31□□□□□ -1.72
SF3A3-207ENST00000488934 ZNF665Q9H7R5 613 aa4.31□□□□□ -1.72
SF3A3-207ENST00000488934 MOB1AQ9H8S9 216 aa4.31□□□□□ -1.72
SF3A3-207ENST00000488934 NTN4Q9HB63 628 aa4.31□□□□□ -1.72
SF3A3-207ENST00000488934 TMEM106BQ9NUM4 274 aa4.31□□□□□ -1.72
SF3A3-207ENST00000488934 IMPAD1Q9NX62 359 aa4.31□□□□□ -1.72
SF3A3-207ENST00000488934 TVP23BQ9NYZ1 205 aa4.31□□□□□ -1.72
SF3A3-207ENST00000488934 WIPI2Q9Y4P8 454 aa4.31□□□□□ -1.72
SF3A3-207ENST00000488934 NPTNQ9Y639 398 aa4.31□□□□□ -1.72
SF3A3-207ENST00000488934 MTORP42345 2549 aa4.31□□□□□ -1.72
SF3A3-207ENST00000488934 TLN2Q9Y4G6 2542 aa4.31□□□□□ -1.72
SF3A3-207ENST00000488934 A0A0G2JMP0 313 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 A0A0X1KG70 313 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 A0A1B0GWJ7 208 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 ACOD1A6NK06 481 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 ANXA2P2A6NMY6 339 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 LINC00473A8K010 186 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 LYNX1G3V0Z9 82 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 MPZL2O60487 215 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 MTRF1O75570 445 aaKnown RBP4.3□□□□□ -1.72
SF3A3-207ENST00000488934 FOXH1O75593 365 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 LYNX1P0DP58 116 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 NDUFB7P17568 137 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 SLC2A5P22732 501 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 MDH2P40926 338 aaKnown RBP4.3□□□□□ -1.72
SF3A3-207ENST00000488934 OPRL1P41146 370 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 CD200P41217 278 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 NAA10P41227 235 aaPredicted RBP4.3□□□□□ -1.72
SF3A3-207ENST00000488934 ALDH3A2P51648 485 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 PRKXP51817 358 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 ZNF121P58317 390 aaPredicted RBP4.3□□□□□ -1.72
SF3A3-207ENST00000488934 BTG1P62324 171 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 ZNF92Q03936 586 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 TMED1Q13445 227 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 APOFQ13790 326 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 KPNB1Q14974 876 aaKnown RBP4.3□□□□□ -1.72
SF3A3-207ENST00000488934 TRIP10Q15642 601 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 RSPO1Q2MKA7 263 aaPredicted RBP4.3□□□□□ -1.72
SF3A3-207ENST00000488934 SNAI3Q3KNW1 292 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 MEDAGQ5VYS4 303 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 TMEM236Q5W0B7 351 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 C12orf73Q69YU5 71 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 Q6ZR03 302 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 MEPCEQ7L2J0 689 aaKnown RBP4.3□□□□□ -1.72
SF3A3-207ENST00000488934 AMIGO2Q86SJ2 522 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 OR4M2Q8NGB6 313 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 OR10AD1Q8NGE0 317 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 OR10S1Q8NGN2 331 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 OR8S1Q8NH09 359 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 TMEM163Q8TC26 289 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 NTN5Q8WTR8 489 aaPredicted RBP4.3□□□□□ -1.72
SF3A3-207ENST00000488934 TRUB1Q8WWH5 349 aaKnown RBP4.3□□□□□ -1.72
SF3A3-207ENST00000488934 PYDC1Q8WXC3 89 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 SPSB4Q96A44 273 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 TMEM186Q96B77 213 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 ZMYND19Q96E35 227 aaPredicted RBP4.3□□□□□ -1.72
SF3A3-207ENST00000488934 MRPL48Q96GC5 212 aaKnown RBP4.3□□□□□ -1.72
SF3A3-207ENST00000488934 REEP6Q96HR9 211 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 PGAM5Q96HS1 289 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 TEAD3Q99594 435 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 SEMA6AQ9H2E6 1030 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 MED20Q9H944 212 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 FN3KRPQ9HA64 309 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 C8orf4Q9NR00 106 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 HAO2Q9NYQ3 351 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 USE1Q9NZ43 259 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 WARS2Q9UGM6 360 aaKnown RBP4.3□□□□□ -1.72
SF3A3-207ENST00000488934 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.3□□□□□ -1.72
SF3A3-207ENST00000488934 LRCH1Q9Y2L9 728 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 LRP12Q9Y561 859 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 NSD1Q96L73 2696 aaPredicted RBP4.3□□□□□ -1.72
SF3A3-207ENST00000488934 ZFHX3Q15911 3703 aa4.3□□□□□ -1.72
SF3A3-207ENST00000488934 FN1P02751 2386 aaKnown RBP4.29□□□□□ -1.72
SF3A3-207ENST00000488934 PPIAL4EA0A075B759 164 aa4.29□□□□□ -1.72
SF3A3-207ENST00000488934 PPIAL4CA0A0B4J2A2 164 aa4.29□□□□□ -1.72
SF3A3-207ENST00000488934 A0A0U1RQV5 110 aa4.29□□□□□ -1.72
SF3A3-207ENST00000488934 hCG_38984A0A1B0GV85 526 aa4.29□□□□□ -1.72
SF3A3-207ENST00000488934 TMEM269A0A1B0GVZ9 245 aa4.29□□□□□ -1.72
SF3A3-207ENST00000488934 CD300LBA8K4G0 201 aa4.29□□□□□ -1.72
SF3A3-207ENST00000488934 ZNF670-ZNF695F2Z2N8 137 aa4.29□□□□□ -1.72
SF3A3-207ENST00000488934 PPIAL4DF5H284 164 aa4.29□□□□□ -1.72
SF3A3-207ENST00000488934 TMEM178BH3BS89 294 aa4.29□□□□□ -1.72
SF3A3-207ENST00000488934 J3QLI3 93 aa4.29□□□□□ -1.72
SF3A3-207ENST00000488934 MLNRO43193 412 aa4.29□□□□□ -1.72
SF3A3-207ENST00000488934 NDUFA2O43678 99 aa4.29□□□□□ -1.72
SF3A3-207ENST00000488934 PRKYO43930 277 aa4.29□□□□□ -1.72
SF3A3-207ENST00000488934 SELENOFO60613 162 aa4.29□□□□□ -1.72
SF3A3-207ENST00000488934 PNPP00491 289 aa4.29□□□□□ -1.72
SF3A3-207ENST00000488934 IGHV2-70P01814 119 aa4.29□□□□□ -1.72
SF3A3-207ENST00000488934 IGHV2-5P01817 119 aa4.29□□□□□ -1.72
SF3A3-207ENST00000488934 ALPLP05186 524 aa4.29□□□□□ -1.72
SF3A3-207ENST00000488934 KRT8P05787 483 aa4.29□□□□□ -1.72
SF3A3-207ENST00000488934 OR2T7P0C7T2 308 aa4.29□□□□□ -1.72
SF3A3-207ENST00000488934 PPIAL4FP0DN26 164 aa4.29□□□□□ -1.72
SF3A3-207ENST00000488934 PF4V1P10720 104 aa4.29□□□□□ -1.72
SF3A3-207ENST00000488934 SLC2A1P11166 492 aa4.29□□□□□ -1.72
SF3A3-207ENST00000488934 ATP6V1B1P15313 513 aa4.29□□□□□ -1.72
SF3A3-207ENST00000488934 ALOX5APP20292 161 aa4.29□□□□□ -1.72
SF3A3-207ENST00000488934 CA6P23280 308 aa4.29□□□□□ -1.72
SF3A3-207ENST00000488934 LMO1P25800 156 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms