RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 SLC22A4Q9H015 551 aa2.42□□□□□ -2.02
SSR1-209ENST00000488834 ALX4Q9H161 411 aaPredicted RBP2.42□□□□□ -2.02
SSR1-209ENST00000488834 C1orf198Q9H425 327 aa2.42□□□□□ -2.02
SSR1-209ENST00000488834 SAV1Q9H4B6 383 aaPredicted RBP2.42□□□□□ -2.02
SSR1-209ENST00000488834 CLMPQ9H6B4 373 aa2.42□□□□□ -2.02
SSR1-209ENST00000488834 C11orf49Q9H6J7 331 aa2.42□□□□□ -2.02
SSR1-209ENST00000488834 NIPAL2Q9H841 368 aa2.42□□□□□ -2.02
SSR1-209ENST00000488834 BEX1Q9HBH7 125 aa2.42□□□□□ -2.02
SSR1-209ENST00000488834 ANKHQ9HCJ1 492 aa2.42□□□□□ -2.02
SSR1-209ENST00000488834 EXD2Q9NVH0 621 aa2.42□□□□□ -2.02
SSR1-209ENST00000488834 MMP17Q9ULZ9 603 aa2.42□□□□□ -2.02
SSR1-209ENST00000488834 PUS1Q9Y606 427 aaKnown RBP eCLIP2.42□□□□□ -2.02
SSR1-209ENST00000488834 SLC22A7Q9Y694 548 aa2.42□□□□□ -2.02
SSR1-209ENST00000488834 TRPM1Q7Z4N2 1603 aa2.42□□□□□ -2.02
SSR1-209ENST00000488834 C9orf84Q5VXU9 1444 aa2.42□□□□□ -2.02
SSR1-209ENST00000488834 TRAPPC8Q9Y2L5 1435 aa2.42□□□□□ -2.02
SSR1-209ENST00000488834 NEO1Q92859 1461 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 KIF1BO60333 1816 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 SCN4AP35499 1836 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 SPEF2Q9C093 1822 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 A0A0G2JN53 185 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 SMIM23A6NLE4 172 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 ZNF729A6NN14 1252 aaPredicted RBP2.41□□□□□ -2.02
SSR1-209ENST00000488834 E7EWF7 191 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 PRAMEF26H0Y7S4 382 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 RNASEK-C17orf49H0YIS7 233 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 GPR171O14626 319 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 HSD17B6O14756 317 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 PPP1R2P9O14990 202 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 SLC31A2O15432 143 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 NUPL2O15504 423 aaKnown RBP2.41□□□□□ -2.02
SSR1-209ENST00000488834 TNFAIP8O95379 198 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 BRI3O95415 125 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 NSA2O95478 260 aaKnown RBP2.41□□□□□ -2.02
SSR1-209ENST00000488834 FADS2O95864 444 aaKnown RBP2.41□□□□□ -2.02
SSR1-209ENST00000488834 IFNA4P05014 189 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 OR4E1P0C645 316 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 RD3LP0DJH9 198 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 COX5BP10606 129 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 CBR1P16152 277 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 HTR2CP28335 458 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 SERPINB1P30740 379 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 HOXA9P31269 272 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 OPRD1P41143 372 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 AQP2P41181 271 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 P2RY2P41231 377 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 ACTR1BP42025 376 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 KIR3DL2P43630 455 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 GPR1P46091 355 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 RPS9P46781 194 aaKnown RBP2.41□□□□□ -2.02
SSR1-209ENST00000488834 TAS2R60P59551 318 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 MAGOHP61326 146 aaKnown RBP2.41□□□□□ -2.02
SSR1-209ENST00000488834 RPS15AP62244 130 aaKnown RBP2.41□□□□□ -2.02
SSR1-209ENST00000488834 MYL5Q02045 173 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 ZNF763Q0D2J5 394 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 PDIA2Q13087 525 aaKnown RBP2.41□□□□□ -2.02
SSR1-209ENST00000488834 SLAMF1Q13291 335 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 GNMTQ14749 295 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 PSG5Q15238 335 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 ZBED5Q49AG3 693 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 C5orf47Q569G3 176 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 LRRC10Q5BKY1 277 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 TMEM31Q5JXX7 168 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 ZNF836Q6ZNA1 936 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 ZNF767PQ75MW2 155 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 PRSS41Q7RTY9 318 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 DCXRQ7Z4W1 244 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 CAMK2N1Q7Z7J9 78 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 SAXO1Q8IYX7 474 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 PDIK1LQ8N165 341 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 CYP4Z2PQ8N1L4 340 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 SNX31Q8N9S9 440 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 OR8J2Q8NGG1 315 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 OR1N2Q8NGR9 330 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 LYPD6BQ8NI32 183 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 ACTRT1Q8TDG2 376 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 ING5Q8WYH8 240 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 STMN2Q93045 179 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 CPNE4Q96A23 557 aaPredicted RBP2.41□□□□□ -2.02
SSR1-209ENST00000488834 MAGOHBQ96A72 148 aaKnown RBP2.41□□□□□ -2.02
SSR1-209ENST00000488834 MRPL48Q96GC5 212 aaKnown RBP2.41□□□□□ -2.02
SSR1-209ENST00000488834 SERPINB11Q96P15 392 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 OXGR1Q96P68 337 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 C1orf50Q9BV19 199 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 ACTR3CQ9C0K3 210 aaPredicted RBP2.41□□□□□ -2.02
SSR1-209ENST00000488834 SRRQ9GZT4 340 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 OR51V1Q9H2C8 321 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 PIGUQ9H490 435 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 Q9H521 79 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 UGT1A7Q9HAW7 530 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 UGT1A8Q9HAW9 530 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 RETNQ9HD89 108 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 SLC25A37Q9NYZ2 338 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 GLTPQ9NZD2 209 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 STOML2Q9UJZ1 356 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 LSM7Q9UK45 103 aaKnown RBP2.41□□□□□ -2.02
SSR1-209ENST00000488834 TBX21Q9UL17 535 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 ASB4Q9Y574 426 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 URGCP-MRPS24S4R325 110 aa2.41□□□□□ -2.02
SSR1-209ENST00000488834 IFT172Q9UG01 1749 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms