RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 TMEM136Q6ZRR5 245 aa1.41□□□□□ -2.18
R3HDM1-219ENST00000488035 NDUFAF7Q7L592 441 aa1.41□□□□□ -2.18
R3HDM1-219ENST00000488035 DAW1Q8N136 415 aa1.41□□□□□ -2.18
R3HDM1-219ENST00000488035 SLC25A29Q8N8R3 303 aa1.41□□□□□ -2.18
R3HDM1-219ENST00000488035 TCP10LQ8TDR4 215 aa1.41□□□□□ -2.18
R3HDM1-219ENST00000488035 TFGQ92734 400 aaPredicted RBP1.41□□□□□ -2.18
R3HDM1-219ENST00000488035 TOP1MTQ969P6 601 aa1.41□□□□□ -2.18
R3HDM1-219ENST00000488035 TMEM175Q9BSA9 504 aa1.41□□□□□ -2.18
R3HDM1-219ENST00000488035 EMC6Q9BV81 110 aa1.41□□□□□ -2.18
R3HDM1-219ENST00000488035 SFXN3Q9BWM7 321 aa1.41□□□□□ -2.18
R3HDM1-219ENST00000488035 CHID1Q9BWS9 393 aa1.41□□□□□ -2.18
R3HDM1-219ENST00000488035 ANGPTL4Q9BY76 406 aa1.41□□□□□ -2.18
R3HDM1-219ENST00000488035 LHX5Q9H2C1 402 aa1.41□□□□□ -2.18
R3HDM1-219ENST00000488035 FBXO44Q9H4M3 255 aa1.41□□□□□ -2.18
R3HDM1-219ENST00000488035 NCOR1P1Q9H4R4 102 aa1.41□□□□□ -2.18
R3HDM1-219ENST00000488035 SND1-IT1Q9HBX3 110 aa1.41□□□□□ -2.18
R3HDM1-219ENST00000488035 CSNK1G1Q9HCP0 422 aa1.41□□□□□ -2.18
R3HDM1-219ENST00000488035 DYRK4Q9NR20 520 aa1.41□□□□□ -2.18
R3HDM1-219ENST00000488035 PEF1Q9UBV8 284 aaKnown RBP1.41□□□□□ -2.18
R3HDM1-219ENST00000488035 NDRG2Q9UN36 371 aaKnown RBP1.41□□□□□ -2.18
R3HDM1-219ENST00000488035 KLF12Q9Y4X4 402 aa1.41□□□□□ -2.18
R3HDM1-219ENST00000488035 RPRD2Q5VT52 1461 aaKnown RBP1.41□□□□□ -2.18
R3HDM1-219ENST00000488035 SHROOM3Q8TF72 1996 aa1.41□□□□□ -2.18
R3HDM1-219ENST00000488035 SDK2Q58EX2 2172 aa1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 NEURL4Q96JN8 1562 aa1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 LOC102724200A0A096LPH7 203 aaPredicted RBP1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 IGHV6-1A0A0B4J1U7 121 aa1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 CLDN34H7C241 214 aa1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 GCGP01275 180 aa1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 GZMAP12544 262 aa1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 GFAPP14136 432 aa1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 COL8A2P25067 703 aa1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 PCK1P35558 622 aa1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 PEX19P40855 299 aa1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 RPL18AQ02543 176 aaKnown RBP1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 MAD2L1BPQ15013 274 aaPredicted RBP1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 HADHQ16836 314 aaKnown RBP1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 MFSD14CQ5VZR4 134 aa1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 EPGNQ6UW88 154 aa1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 ZNF321PQ8N8H1 164 aa1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 CYB561A3Q8NBI2 242 aa1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 APCDD1LQ8NCL9 501 aa1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 OR4M2Q8NGB6 313 aa1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 TMEM234Q8WY98 164 aa1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 ALS2CR12Q96Q35 445 aa1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 NAPGQ99747 312 aaPredicted RBP1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 BCL7BQ9BQE9 202 aa1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 MS4A8Q9BY19 250 aa1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 RGCCQ9H4X1 137 aa1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 ADA2Q9NZK5 511 aa1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 CRCT1Q9UGL9 99 aa1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 RWDD2AQ9UIY3 292 aa1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 KPTNQ9Y664 436 aa1.4□□□□□ -2.19
R3HDM1-219ENST00000488035 FCGBPQ9Y6R7 5405 aaPredicted RBP1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 J3QT63 122 aa1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 DFFAO00273 331 aa1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 MFNGO00587 321 aa1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 OR7C2O60412 319 aa1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 PTHP01270 115 aa1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 PAX6P26367 422 aa1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 GALR1P47211 349 aa1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 HCCSP53701 268 aa1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 TAS2R39P59534 338 aa1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 YWHAEP62258 255 aaKnown RBP1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 SLC35A1P78382 337 aa1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 ZNF678Q5SXM1 525 aa1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 FAM131AQ6UXB0 335 aa1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 CASP12Q6UXS9 341 aa1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 OR2W3Q7Z3T1 314 aa1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 DAZ4Q86SG3 579 aaKnown RBP1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 BBS7Q8IWZ6 715 aa1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 ORMDL3Q8N138 153 aa1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 FBXO36Q8NEA4 188 aa1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 C1orf64Q8NEQ6 169 aa1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 OR2M7Q8NG81 312 aa1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 OR4A15Q8NGL6 344 aa1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 ZNF420Q8TAQ5 688 aaPredicted RBP1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 SMARCD1Q96GM5 515 aa1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 C20orf144Q9BQM9 153 aa1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 SHANK2-AS3Q9BTD1 123 aa1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 ANP32EQ9BTT0 268 aa1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 IL22Q9GZX6 179 aa1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 CLSTN2Q9H4D0 955 aa1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 DAZ1Q9NQZ3 744 aaKnown RBP1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 CHRAC1Q9NRG0 131 aa1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 TMEM131Q92545 1883 aa1.39□□□□□ -2.19
R3HDM1-219ENST00000488035 NID2Q14112 1375 aa1.38□□□□□ -2.19
R3HDM1-219ENST00000488035 PLEKHG2Q9H7P9 1386 aa1.38□□□□□ -2.19
R3HDM1-219ENST00000488035 TRAV8-6A0A0B4J262 113 aa1.38□□□□□ -2.19
R3HDM1-219ENST00000488035 ISPDA4D126 451 aa1.38□□□□□ -2.19
R3HDM1-219ENST00000488035 CENPBD1B2RD01 187 aa1.38□□□□□ -2.19
R3HDM1-219ENST00000488035 PRAMEF26H0Y7S4 382 aa1.38□□□□□ -2.19
R3HDM1-219ENST00000488035 TTC4O95801 387 aa1.38□□□□□ -2.19
R3HDM1-219ENST00000488035 MMP7P09237 267 aaPredicted RBP1.38□□□□□ -2.19
R3HDM1-219ENST00000488035 GNRHRP30968 328 aa1.38□□□□□ -2.19
R3HDM1-219ENST00000488035 ARL2P36404 184 aa1.38□□□□□ -2.19
R3HDM1-219ENST00000488035 IDH2P48735 452 aaKnown RBP1.38□□□□□ -2.19
R3HDM1-219ENST00000488035 PPP1CAP62136 330 aa1.38□□□□□ -2.19
R3HDM1-219ENST00000488035 GRB2P62993 217 aaKnown RBP1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms