RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 RHBDL1O75783 438 aa20.18■□□□□ 0.82
LIME1-206ENST00000487026 NDUFA7O95182 113 aa20.18■□□□□ 0.82
LIME1-206ENST00000487026 CEP78Q5JTW2 689 aa20.18■□□□□ 0.82
LIME1-206ENST00000487026 C17orf107Q6ZR85 190 aa20.18■□□□□ 0.82
LIME1-206ENST00000487026 Q8N7P7 452 aa20.18■□□□□ 0.82
LIME1-206ENST00000487026 FAM81AQ8TBF8 368 aa20.18■□□□□ 0.82
LIME1-206ENST00000487026 WFDC12Q8WWY7 111 aa20.18■□□□□ 0.82
LIME1-206ENST00000487026 PPP1R14AQ96A00 147 aa20.18■□□□□ 0.82
LIME1-206ENST00000487026 GAFA1Q96PS6 74 aa20.18■□□□□ 0.82
LIME1-206ENST00000487026 TEAD3Q99594 435 aa20.18■□□□□ 0.82
LIME1-206ENST00000487026 TEX12Q9BXU0 123 aa20.18■□□□□ 0.82
LIME1-206ENST00000487026 TTTY10Q9BZA0 68 aa20.18■□□□□ 0.82
LIME1-206ENST00000487026 ABCB9Q9NP78 766 aa20.18■□□□□ 0.82
LIME1-206ENST00000487026 FAM96BQ9Y3D0 163 aa20.18■□□□□ 0.82
LIME1-206ENST00000487026 PRR32B1ATL7 298 aa20.17■□□□□ 0.82
LIME1-206ENST00000487026 GPR137BO60478 399 aa20.17■□□□□ 0.82
LIME1-206ENST00000487026 DCTDP32321 178 aa20.17■□□□□ 0.82
LIME1-206ENST00000487026 CRISP1P54107 249 aa20.17■□□□□ 0.82
LIME1-206ENST00000487026 DGUOKQ16854 277 aa20.17■□□□□ 0.82
LIME1-206ENST00000487026 ZNF788Q6ZQV5 615 aa20.17■□□□□ 0.82
LIME1-206ENST00000487026 TRPM8Q7Z2W7 1104 aa20.17■□□□□ 0.82
LIME1-206ENST00000487026 CMTM4Q8IZR5 234 aa20.17■□□□□ 0.82
LIME1-206ENST00000487026 ANGPTL6Q8NI99 470 aa20.17■□□□□ 0.82
LIME1-206ENST00000487026 DYRK2Q92630 601 aa20.17■□□□□ 0.82
LIME1-206ENST00000487026 YIPF3Q9GZM5 350 aa20.17■□□□□ 0.82
LIME1-206ENST00000487026 YY1AP1Q9H869 796 aa20.17■□□□□ 0.82
LIME1-206ENST00000487026 FAM206AQ9NX38 181 aa20.17■□□□□ 0.82
LIME1-206ENST00000487026 POMPQ9Y244 141 aa20.17■□□□□ 0.82
LIME1-206ENST00000487026 ZNF816-ZNF321PA0A0X1KG74 233 aa20.16■□□□□ 0.82
LIME1-206ENST00000487026 TMEM269A0A1B0GVZ9 245 aa20.16■□□□□ 0.82
LIME1-206ENST00000487026 TCRBV3S1A0A5B6 114 aa20.16■□□□□ 0.82
LIME1-206ENST00000487026 CLPSL1A2RUU4 121 aa20.16■□□□□ 0.82
LIME1-206ENST00000487026 CCDC182A6NF36 153 aa20.16■□□□□ 0.82
LIME1-206ENST00000487026 NKX6-3A6NJ46 265 aa20.16■□□□□ 0.82
LIME1-206ENST00000487026 ZNF732B4DXR9 585 aa20.16■□□□□ 0.82
LIME1-206ENST00000487026 RNASEK-C17orf49H0YIS7 233 aa20.16■□□□□ 0.82
LIME1-206ENST00000487026 GPR37O15354 613 aa20.16■□□□□ 0.82
LIME1-206ENST00000487026 HOXB6P17509 224 aaKnown RBP20.16■□□□□ 0.82
LIME1-206ENST00000487026 MAP2K3P46734 347 aa20.16■□□□□ 0.82
LIME1-206ENST00000487026 KLRD1Q13241 179 aa20.16■□□□□ 0.82
LIME1-206ENST00000487026 KCTD18Q6PI47 426 aaPredicted RBP20.16■□□□□ 0.82
LIME1-206ENST00000487026 LDLRAD3Q86YD5 345 aa20.16■□□□□ 0.82
LIME1-206ENST00000487026 PAPD5Q8NDF8 572 aaKnown RBP20.16■□□□□ 0.82
LIME1-206ENST00000487026 SLC7A6OSQ96CW6 309 aaPredicted RBP20.16■□□□□ 0.82
LIME1-206ENST00000487026 PBOV1Q9GZY1 135 aa20.16■□□□□ 0.82
LIME1-206ENST00000487026 DNTTIP1Q9H147 329 aa20.16■□□□□ 0.82
LIME1-206ENST00000487026 SLC25A10Q9UBX3 287 aaPredicted RBP20.16■□□□□ 0.82
LIME1-206ENST00000487026 COPS3Q9UNS2 423 aa20.16■□□□□ 0.82
LIME1-206ENST00000487026 OR2AT4A6NND4 320 aa20.15■□□□□ 0.82
LIME1-206ENST00000487026 NDUFB7P17568 137 aa20.15■□□□□ 0.82
LIME1-206ENST00000487026 GLRA1P23415 457 aa20.15■□□□□ 0.82
LIME1-206ENST00000487026 GABRA2P47869 451 aa20.15■□□□□ 0.82
LIME1-206ENST00000487026 DAPP51397 102 aa20.15■□□□□ 0.82
LIME1-206ENST00000487026 KRTAP10-3P60369 221 aa20.15■□□□□ 0.82
LIME1-206ENST00000487026 DNAL1Q4LDG9 190 aa20.15■□□□□ 0.82
LIME1-206ENST00000487026 BCDIN3DQ7Z5W3 292 aaKnown RBP20.15■□□□□ 0.82
LIME1-206ENST00000487026 COMMD2Q86X83 199 aa20.15■□□□□ 0.82
LIME1-206ENST00000487026 PNKDQ8N490 385 aa20.15■□□□□ 0.82
LIME1-206ENST00000487026 OR51E1Q8TCB6 317 aa20.15■□□□□ 0.82
LIME1-206ENST00000487026 MED30Q96HR3 178 aa20.15■□□□□ 0.82
LIME1-206ENST00000487026 MROQ9BYG7 248 aa20.15■□□□□ 0.82
LIME1-206ENST00000487026 OR51I2Q9H344 312 aa20.15■□□□□ 0.82
LIME1-206ENST00000487026 PAPOLBQ9NRJ5 636 aaKnown RBP20.15■□□□□ 0.82
LIME1-206ENST00000487026 NLKQ9UBE8 527 aa20.15■□□□□ 0.82
LIME1-206ENST00000487026 A0A0U1RQV5 110 aa20.14■□□□□ 0.81
LIME1-206ENST00000487026 ACAA1P09110 424 aaPredicted RBP20.14■□□□□ 0.81
LIME1-206ENST00000487026 PTGES3Q15185 160 aaKnown RBP20.14■□□□□ 0.81
LIME1-206ENST00000487026 DEGS2Q6QHC5 323 aa20.14■□□□□ 0.81
LIME1-206ENST00000487026 MOB3CQ70IA8 216 aa20.14■□□□□ 0.81
LIME1-206ENST00000487026 C8orf46Q8TAG6 207 aa20.14■□□□□ 0.81
LIME1-206ENST00000487026 ELL3Q9HB65 397 aaPredicted RBP20.14■□□□□ 0.81
LIME1-206ENST00000487026 GPR84Q9NQS5 396 aa20.14■□□□□ 0.81
LIME1-206ENST00000487026 IGKV1D-17A0A075B6S4 117 aa20.13■□□□□ 0.81
LIME1-206ENST00000487026 ACOD1A6NK06 481 aa20.13■□□□□ 0.81
LIME1-206ENST00000487026 M0R129 80 aa20.13■□□□□ 0.81
LIME1-206ENST00000487026 SIGLEC5O15389 551 aa20.13■□□□□ 0.81
LIME1-206ENST00000487026 MAGEB4O15481 346 aaPredicted RBP20.13■□□□□ 0.81
LIME1-206ENST00000487026 PRKYO43930 277 aa20.13■□□□□ 0.81
LIME1-206ENST00000487026 GNG3P63215 75 aa20.13■□□□□ 0.81
LIME1-206ENST00000487026 TAF9Q16594 264 aa20.13■□□□□ 0.81
LIME1-206ENST00000487026 CEACAM21Q3KPI0 293 aa20.13■□□□□ 0.81
LIME1-206ENST00000487026 FAHD1Q6P587 224 aa20.13■□□□□ 0.81
LIME1-206ENST00000487026 BRICD5Q6PL45 260 aa20.13■□□□□ 0.81
LIME1-206ENST00000487026 METAP1DQ6UB28 335 aaPredicted RBP20.13■□□□□ 0.81
LIME1-206ENST00000487026 THAP5Q7Z6K1 395 aa20.13■□□□□ 0.81
LIME1-206ENST00000487026 ZNRF1Q8ND25 227 aa20.13■□□□□ 0.81
LIME1-206ENST00000487026 TNFRSF14Q92956 283 aa20.13■□□□□ 0.81
LIME1-206ENST00000487026 DMRTB1Q96MA1 342 aa20.13■□□□□ 0.81
LIME1-206ENST00000487026 OR8B4Q96RC9 309 aa20.13■□□□□ 0.81
LIME1-206ENST00000487026 IKZF2Q9UKS7 526 aa20.13■□□□□ 0.81
LIME1-206ENST00000487026 RNF114Q9Y508 228 aa20.13■□□□□ 0.81
LIME1-206ENST00000487026 A0A1W2PQ09 198 aa20.12■□□□□ 0.81
LIME1-206ENST00000487026 NPFFO15130 113 aa20.12■□□□□ 0.81
LIME1-206ENST00000487026 GSC2O15499 205 aa20.12■□□□□ 0.81
LIME1-206ENST00000487026 DNAJC8O75937 253 aaPredicted RBP20.12■□□□□ 0.81
LIME1-206ENST00000487026 PSG2P11465 335 aa20.12■□□□□ 0.81
LIME1-206ENST00000487026 FAHP16930 419 aa20.12■□□□□ 0.81
LIME1-206ENST00000487026 EEF1B2P24534 225 aaKnown RBP20.12■□□□□ 0.81
LIME1-206ENST00000487026 MFGE8Q08431 387 aaPredicted RBP20.12■□□□□ 0.81
LIME1-206ENST00000487026 RIPPLY1Q0D2K3 151 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms