RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 ARFRP1Q13795 201 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 PLPP4Q5VZY2 271 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 ZNF429Q86V71 674 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 LFNGQ8NES3 379 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 CSNK2A3Q8NEV1 391 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 OR9A4Q8NGU2 314 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 OR13D1Q8NGV5 346 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 SMDT1Q9H4I9 107 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 MUC22E2RYF6 1773 aaPredicted RBP9.4□□□□□ -0.9
CCDC171-208ENST00000486641 E5RGE8 158 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 K7N7A8 449 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 ATXN7O15265 892 aaPredicted RBP9.4□□□□□ -0.9
CCDC171-208ENST00000486641 CDC14BO60729 498 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 NSA2O95478 260 aaKnown RBP9.4□□□□□ -0.9
CCDC171-208ENST00000486641 SRP19P09132 144 aaKnown RBP9.4□□□□□ -0.9
CCDC171-208ENST00000486641 HPGDP15428 266 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 G0S2P27469 103 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 SNU13P55769 128 aaKnown RBP9.4□□□□□ -0.9
CCDC171-208ENST00000486641 RND3P61587 244 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 FOXK1P85037 733 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 ERV3-1Q14264 604 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 KIR2DS3Q14952 304 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 LHX8Q68G74 356 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 VITQ6UXI7 678 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 OR6X1Q8NH79 312 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 RAB24Q969Q5 203 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 NDUFAF3Q9BU61 184 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 ABHD14AQ9BUJ0 271 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 CENPMQ9NSP4 180 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 DEC1Q9P2X7 70 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 C14orf166Q9Y224 244 aaKnown RBP9.4□□□□□ -0.9
CCDC171-208ENST00000486641 NSG2Q9Y328 171 aa9.4□□□□□ -0.9
CCDC171-208ENST00000486641 XRCC2O43543 280 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 HCRTR1O43613 425 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 GPR137BO60478 399 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 PQBP1O60828 265 aaKnown RBP9.39□□□□□ -0.91
CCDC171-208ENST00000486641 IFNA21P01568 189 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 TTRP02766 147 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 CTSBP07858 339 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 GZMBP10144 247 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 GLIPR1P48060 266 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 ACY1Q03154 408 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 GLO1Q04760 184 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 TNFRSF9Q07011 255 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 JOSD1Q15040 202 aaPredicted RBP9.39□□□□□ -0.91
CCDC171-208ENST00000486641 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.39□□□□□ -0.91
CCDC171-208ENST00000486641 SGPP2Q8IWX5 399 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 OR5D14Q8NGL3 314 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 CCL4L1Q8NHW4 92 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 C1orf147Q96MC9 270 aaPredicted RBP9.39□□□□□ -0.91
CCDC171-208ENST00000486641 OR10A5Q9H207 317 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 FGF22Q9HCT0 170 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.39□□□□□ -0.91
CCDC171-208ENST00000486641 FAM86C1Q9NVL1 165 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 SUSD2Q9UGT4 822 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 MRPS28Q9Y2Q9 187 aaKnown RBP9.39□□□□□ -0.91
CCDC171-208ENST00000486641 KCNIP3Q9Y2W7 256 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 A0A087WZY1 265 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 C17orf51A8MQB3 221 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 EREGO14944 169 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 CYTIPO60759 359 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 DIRAS3O95661 229 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 PGA4P0DJD7 388 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 PGA5P0DJD9 388 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 GIMD1P0DJR0 217 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 ZNF823P16415 610 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 APLNRP35414 380 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 WASP42768 502 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 GPR3P46089 330 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 OR3A4PP47883 348 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 RGS19P49795 217 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 ASCL1P50553 236 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 GAB4Q2WGN9 574 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 SPSB3Q6PJ21 355 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 SLC22A25Q6T423 547 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 NUP54Q7Z3B4 507 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.39□□□□□ -0.91
CCDC171-208ENST00000486641 TVP23CQ96ET8 276 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 NOL4LQ96MY1 436 aaPredicted RBP9.39□□□□□ -0.91
CCDC171-208ENST00000486641 TXNIPQ9H3M7 391 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 UNKLQ9H9P5 680 aaKnown RBP9.39□□□□□ -0.91
CCDC171-208ENST00000486641 SIRT7Q9NRC8 400 aa9.39□□□□□ -0.91
CCDC171-208ENST00000486641 MKI67P46013 3256 aaKnown RBP9.39□□□□□ -0.91
CCDC171-208ENST00000486641 A0A1W2PP55 124 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 LINC01553A4QN01 128 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 H2BFMP0C1H6 154 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 RNH1P13489 461 aaKnown RBP9.38□□□□□ -0.91
CCDC171-208ENST00000486641 VIPR2P41587 438 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 C21orf62-AS1Q17RA5 79 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 BEND2Q8NDZ0 799 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 FAM210BQ96KR6 192 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 C5orf34Q96MH7 638 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 APOOQ9BUR5 198 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 RTN4RQ9BZR6 473 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 FAM206AQ9NX38 181 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 FOXD3Q9UJU5 478 aaPredicted RBP9.38□□□□□ -0.91
CCDC171-208ENST00000486641 TRAV36DV7A0A075B6V5 113 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 CCDC187A0A096LP49 1063 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 CDRT15L2A8MXV6 281 aa9.38□□□□□ -0.91
CCDC171-208ENST00000486641 SCDO00767 359 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms