RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 FAM216BQ8N7L0 139 aa14.65□□□□□ -0.06
COL6A1-204ENST00000486023 FAM216AQ8WUB2 273 aa14.65□□□□□ -0.06
COL6A1-204ENST00000486023 HPSE2Q8WWQ2 592 aa14.65□□□□□ -0.06
COL6A1-204ENST00000486023 UPRTQ96BW1 309 aa14.65□□□□□ -0.06
COL6A1-204ENST00000486023 ZNF48Q96MX3 618 aaPredicted RBP14.65□□□□□ -0.06
COL6A1-204ENST00000486023 GABARAPL3Q9BY60 117 aa14.65□□□□□ -0.06
COL6A1-204ENST00000486023 TNFRSF19Q9NS68 423 aa14.65□□□□□ -0.06
COL6A1-204ENST00000486023 IMPAD1Q9NX62 359 aa14.65□□□□□ -0.06
COL6A1-204ENST00000486023 WARS2Q9UGM6 360 aaKnown RBP14.65□□□□□ -0.06
COL6A1-204ENST00000486023 NUFIP1Q9UHK0 495 aaKnown RBP14.65□□□□□ -0.06
COL6A1-204ENST00000486023 MRM2Q9UI43 246 aaKnown RBP14.65□□□□□ -0.06
COL6A1-204ENST00000486023 SLC22A13Q9Y226 551 aa14.65□□□□□ -0.06
COL6A1-204ENST00000486023 R4GMQ9 66 aa14.65□□□□□ -0.06
COL6A1-204ENST00000486023 MDFIC2A0A1B0GVS7 189 aa14.64□□□□□ -0.07
COL6A1-204ENST00000486023 A0A1W2PQL4 384 aaPredicted RBP14.64□□□□□ -0.07
COL6A1-204ENST00000486023 H3BNX3 289 aa14.64□□□□□ -0.07
COL6A1-204ENST00000486023 EBAG9O00559 213 aa14.64□□□□□ -0.07
COL6A1-204ENST00000486023 EI24O14681 340 aa14.64□□□□□ -0.07
COL6A1-204ENST00000486023 RHBDL1O75783 438 aa14.64□□□□□ -0.07
COL6A1-204ENST00000486023 TTRP02766 147 aa14.64□□□□□ -0.07
COL6A1-204ENST00000486023 MUC1P15941 1255 aaPredicted RBP14.64□□□□□ -0.07
COL6A1-204ENST00000486023 HTR1FP30939 366 aa14.64□□□□□ -0.07
COL6A1-204ENST00000486023 GABRA2P47869 451 aa14.64□□□□□ -0.07
COL6A1-204ENST00000486023 SLC36A1Q7Z2H8 476 aa14.64□□□□□ -0.07
COL6A1-204ENST00000486023 PDZD9Q8IXQ8 264 aa14.64□□□□□ -0.07
COL6A1-204ENST00000486023 PNLDC1Q8NA58 520 aaKnown RBP14.64□□□□□ -0.07
COL6A1-204ENST00000486023 OR8J1Q8NGP2 316 aa14.64□□□□□ -0.07
COL6A1-204ENST00000486023 ZFAND2BQ8WV99 257 aa14.64□□□□□ -0.07
COL6A1-204ENST00000486023 H1FXQ92522 213 aaKnown RBP14.64□□□□□ -0.07
COL6A1-204ENST00000486023 ZDHHC16Q969W1 377 aa14.64□□□□□ -0.07
COL6A1-204ENST00000486023 EME1Q96AY2 570 aa14.64□□□□□ -0.07
COL6A1-204ENST00000486023 DACT3Q96B18 629 aaPredicted RBP14.64□□□□□ -0.07
COL6A1-204ENST00000486023 MNTQ99583 582 aa14.64□□□□□ -0.07
COL6A1-204ENST00000486023 TLNRD1Q9H1K6 362 aa14.64□□□□□ -0.07
COL6A1-204ENST00000486023 GPR173Q9NS66 373 aa14.64□□□□□ -0.07
COL6A1-204ENST00000486023 HAO2Q9NYQ3 351 aa14.64□□□□□ -0.07
COL6A1-204ENST00000486023 ENPP5Q9UJA9 477 aa14.64□□□□□ -0.07
COL6A1-204ENST00000486023 SNX5Q9Y5X3 404 aa14.64□□□□□ -0.07
COL6A1-204ENST00000486023 ZNF879B4DU55 563 aa14.63□□□□□ -0.07
COL6A1-204ENST00000486023 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.63□□□□□ -0.07
COL6A1-204ENST00000486023 NDUFB3O43676 98 aa14.63□□□□□ -0.07
COL6A1-204ENST00000486023 MTRF1O75570 445 aaKnown RBP14.63□□□□□ -0.07
COL6A1-204ENST00000486023 GLRA1P23415 457 aa14.63□□□□□ -0.07
COL6A1-204ENST00000486023 MTNR1AP48039 350 aa14.63□□□□□ -0.07
COL6A1-204ENST00000486023 UBA52P62987 128 aaKnown RBP14.63□□□□□ -0.07
COL6A1-204ENST00000486023 GNG3P63215 75 aa14.63□□□□□ -0.07
COL6A1-204ENST00000486023 EGR3Q06889 387 aa14.63□□□□□ -0.07
COL6A1-204ENST00000486023 CEACAM21Q3KPI0 293 aa14.63□□□□□ -0.07
COL6A1-204ENST00000486023 GPR157Q5UAW9 335 aa14.63□□□□□ -0.07
COL6A1-204ENST00000486023 METTL11BQ5VVY1 283 aa14.63□□□□□ -0.07
COL6A1-204ENST00000486023 RUSC1-AS1Q66K80 236 aa14.63□□□□□ -0.07
COL6A1-204ENST00000486023 HAGHLQ6PII5 290 aaPredicted RBP14.63□□□□□ -0.07
COL6A1-204ENST00000486023 ONECUT1Q9UBC0 465 aa14.63□□□□□ -0.07
COL6A1-204ENST00000486023 FBN3Q75N90 2809 aa14.63□□□□□ -0.07
COL6A1-204ENST00000486023 DNAJC9-AS1A6NH13 148 aa14.62□□□□□ -0.07
COL6A1-204ENST00000486023 SRRM5B3KS81 715 aa14.62□□□□□ -0.07
COL6A1-204ENST00000486023 FCN3O75636 299 aa14.62□□□□□ -0.07
COL6A1-204ENST00000486023 NRASP01111 189 aa14.62□□□□□ -0.07
COL6A1-204ENST00000486023 LIPFP07098 398 aa14.62□□□□□ -0.07
COL6A1-204ENST00000486023 OR2T7P0C7T2 308 aa14.62□□□□□ -0.07
COL6A1-204ENST00000486023 SELLP14151 372 aa14.62□□□□□ -0.07
COL6A1-204ENST00000486023 ATP6V1B1P15313 513 aa14.62□□□□□ -0.07
COL6A1-204ENST00000486023 CFHR2P36980 270 aa14.62□□□□□ -0.07
COL6A1-204ENST00000486023 ZNF684Q5T5D7 378 aa14.62□□□□□ -0.07
COL6A1-204ENST00000486023 DOK3Q7L591 496 aa14.62□□□□□ -0.07
COL6A1-204ENST00000486023 ELMOD2Q8IZ81 293 aa14.62□□□□□ -0.07
COL6A1-204ENST00000486023 BATF2Q8N1L9 274 aa14.62□□□□□ -0.07
COL6A1-204ENST00000486023 CBR4Q8N4T8 237 aa14.62□□□□□ -0.07
COL6A1-204ENST00000486023 OR5A2Q8NGI9 324 aa14.62□□□□□ -0.07
COL6A1-204ENST00000486023 OR10Z1Q8NGY1 313 aa14.62□□□□□ -0.07
COL6A1-204ENST00000486023 OR2T27Q8NH04 317 aa14.62□□□□□ -0.07
COL6A1-204ENST00000486023 LHX4Q969G2 390 aa14.62□□□□□ -0.07
COL6A1-204ENST00000486023 RFKQ969G6 155 aa14.62□□□□□ -0.07
COL6A1-204ENST00000486023 WDFY2Q96P53 400 aa14.62□□□□□ -0.07
COL6A1-204ENST00000486023 OR51I2Q9H344 312 aa14.62□□□□□ -0.07
COL6A1-204ENST00000486023 AASSQ9UDR5 926 aa14.62□□□□□ -0.07
COL6A1-204ENST00000486023 NKX6-3A6NJ46 265 aa14.61□□□□□ -0.07
COL6A1-204ENST00000486023 METTL15A6NJ78 407 aa14.61□□□□□ -0.07
COL6A1-204ENST00000486023 ENTPD6O75354 484 aa14.61□□□□□ -0.07
COL6A1-204ENST00000486023 SRSF10O75494 262 aaKnown RBP14.61□□□□□ -0.07
COL6A1-204ENST00000486023 DHRS3O75911 302 aa14.61□□□□□ -0.07
COL6A1-204ENST00000486023 ECDO95905 644 aaPredicted RBP14.61□□□□□ -0.07
COL6A1-204ENST00000486023 ALPLP05186 524 aa14.61□□□□□ -0.07
COL6A1-204ENST00000486023 PPIAL4GP0DN37 164 aa14.61□□□□□ -0.07
COL6A1-204ENST00000486023 PRB3Q04118 309 aaPredicted RBP14.61□□□□□ -0.07
COL6A1-204ENST00000486023 LRRC10Q5BKY1 277 aa14.61□□□□□ -0.07
COL6A1-204ENST00000486023 FAM76BQ5HYJ3 339 aa14.61□□□□□ -0.07
COL6A1-204ENST00000486023 ZFP1Q6P2D0 407 aa14.61□□□□□ -0.07
COL6A1-204ENST00000486023 C3orf56Q8N813 242 aa14.61□□□□□ -0.07
COL6A1-204ENST00000486023 ZNF671Q8TAW3 534 aa14.61□□□□□ -0.07
COL6A1-204ENST00000486023 TMIGD2Q96BF3 282 aa14.61□□□□□ -0.07
COL6A1-204ENST00000486023 ZNF488Q96MN9 340 aa14.61□□□□□ -0.07
COL6A1-204ENST00000486023 RAB3IPQ96QF0 476 aaPredicted RBP14.61□□□□□ -0.07
COL6A1-204ENST00000486023 ADI1Q9BV57 179 aa14.61□□□□□ -0.07
COL6A1-204ENST00000486023 CNTD2Q9H8S5 307 aa14.61□□□□□ -0.07
COL6A1-204ENST00000486023 MOB1AQ9H8S9 216 aa14.61□□□□□ -0.07
COL6A1-204ENST00000486023 NLKQ9UBE8 527 aa14.61□□□□□ -0.07
COL6A1-204ENST00000486023 KAAG1Q9UBP8 84 aa14.61□□□□□ -0.07
COL6A1-204ENST00000486023 GNG8Q9UK08 70 aa14.61□□□□□ -0.07
COL6A1-204ENST00000486023 A0A1B0GVI7 797 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms