RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 ITGA5P08648 1049 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 SLC2A1P11166 492 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 B4GALT1P15291 398 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 DDOSTP39656 456 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 MNDAP41218 407 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 HTR5AP47898 357 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 POU3F4P49335 361 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 GFOD2Q3B7J2 385 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 C2orf76Q3KRA6 126 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 CCDC92Q53HC0 331 aaPredicted RBP6□□□□□ -1.45
BRCA1-216ENST00000484087 GLYATL3Q5SZD4 288 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 TSPO2Q5TGU0 170 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 SEZ6L2Q6UXD5 910 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 DPPA2Q7Z7J5 298 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 CDH26Q8IXH8 852 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 DTX3Q8N9I9 347 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 PNLDC1Q8NA58 520 aaKnown RBP6□□□□□ -1.45
BRCA1-216ENST00000484087 OR51D1Q8NGF3 324 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 OR1F12Q8NHA8 337 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 FCAMRQ8WWV6 532 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 C10orf35Q96D05 121 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 FBXO17Q96EF6 278 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 CPNE2Q96FN4 548 aaPredicted RBP6□□□□□ -1.45
BRCA1-216ENST00000484087 FAM71F1Q96KD3 344 aaPredicted RBP6□□□□□ -1.45
BRCA1-216ENST00000484087 ABHD1Q96SE0 405 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 UQCC2Q9BRT2 126 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 C1QTNF6Q9BXI9 259 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 GSX2Q9BZM3 304 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 C11orf54Q9H0W9 315 aaPredicted RBP6□□□□□ -1.45
BRCA1-216ENST00000484087 PLEKHF2Q9H8W4 249 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 RNF121Q9H920 327 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 GLRX2Q9NS18 164 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 ETAA1Q9NY74 926 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 NPAP1Q9NZP6 1156 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 CACNG2Q9Y698 323 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 DSCAMO60469 2012 aa6□□□□□ -1.45
BRCA1-216ENST00000484087 CADP27708 2225 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 FLNAP21333 2647 aaKnown RBP5.99□□□□□ -1.45
BRCA1-216ENST00000484087 A0A0A6YYH2 397 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 A0A1B0GTI1 187 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 LOC390937A0A1W2PQ73 354 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 NAP1L6A6NFF2 107 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 A6NJ64 397 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 PLA2G10O15496 165 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 ORC5O43913 435 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 DHRS3O75911 302 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 LCATP04180 440 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 HCKP08631 526 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 SPNP16150 400 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 ZNF32P17041 273 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 CCL1P22362 96 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 CRYGSP22914 178 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 IL32P24001 234 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 CDK2P24941 298 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 OTX1P32242 354 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-216ENST00000484087 THBS4P35443 961 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 FAUP35544 74 aaKnown RBP5.99□□□□□ -1.45
BRCA1-216ENST00000484087 ZNF93P35789 620 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-216ENST00000484087 OR3A2P47893 321 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 TAS2R20P59543 309 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 FAPQ12884 760 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 C1orf100Q5SVJ3 147 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 SFRP5Q5T4F7 317 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 RSBN1Q5VWQ0 802 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-216ENST00000484087 RAB12Q6IQ22 244 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 TMEM53Q6P2H8 277 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 ANKRD16Q6P6B7 361 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 DUSP18Q8NEJ0 188 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 OR1J2Q8NGS2 313 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 OR13C9Q8NGT0 318 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 SMIM4Q8WVI0 70 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 PP6455Q8WZ26 134 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 TRIM63Q969Q1 353 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 PTX4Q96A99 478 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 SLC25A38Q96DW6 304 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 ZNF837Q96EG3 531 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-216ENST00000484087 PLPPR2Q96GM1 343 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 RHOVQ96L33 236 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 OR2H1Q9GZK4 316 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 ATG5Q9H1Y0 275 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 DPAGT1Q9H3H5 408 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 RGCCQ9H4X1 137 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 METTL17Q9H7H0 456 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-216ENST00000484087 SLC7A10Q9NS82 523 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 ELOVL5Q9NYP7 299 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 TAS2R8Q9NYW2 309 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 COPZ2Q9P299 210 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 ATPIF1Q9UII2 106 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 MED13LQ71F56 2210 aa5.99□□□□□ -1.45
BRCA1-216ENST00000484087 TMEM272A0A1B0GTI8 110 aa5.98□□□□□ -1.45
BRCA1-216ENST00000484087 DHRS7CA6NNS2 312 aa5.98□□□□□ -1.45
BRCA1-216ENST00000484087 SYNGR3O43761 229 aa5.98□□□□□ -1.45
BRCA1-216ENST00000484087 RBBP9O75884 186 aa5.98□□□□□ -1.45
BRCA1-216ENST00000484087 BPNT1O95861 308 aa5.98□□□□□ -1.45
BRCA1-216ENST00000484087 PF4P02776 101 aa5.98□□□□□ -1.45
BRCA1-216ENST00000484087 ALDOBP05062 364 aa5.98□□□□□ -1.45
BRCA1-216ENST00000484087 CD3GP09693 182 aa5.98□□□□□ -1.45
BRCA1-216ENST00000484087 FAM157BP0CG42 384 aa5.98□□□□□ -1.45
BRCA1-216ENST00000484087 UBBP0CG47 229 aa5.98□□□□□ -1.45
BRCA1-216ENST00000484087 CD37P11049 281 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms