RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 STOML2Q9UJZ1 356 aa3.37□□□□□ -1.87
PTCD3-214ENST00000483925 MOKQ9UQ07 419 aa3.37□□□□□ -1.87
PTCD3-214ENST00000483925 SNX10Q9Y5X0 201 aa3.37□□□□□ -1.87
PTCD3-214ENST00000483925 MRPS18BQ9Y676 258 aaKnown RBP3.37□□□□□ -1.87
PTCD3-214ENST00000483925 SCN5AQ14524 2016 aa3.37□□□□□ -1.87
PTCD3-214ENST00000483925 DOCK7Q96N67 2140 aa3.37□□□□□ -1.87
PTCD3-214ENST00000483925 ADGRL3Q9HAR2 1447 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 IGHV3OR16-10A0A075B7F0 116 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 A0A087WYN8 130 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.36□□□□□ -1.87
PTCD3-214ENST00000483925 DAPL1A0PJW8 107 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 C21orf140B9A014 251 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 H0Y9J4 135 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 J3QT63 122 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 CXCR6O00574 342 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 KMOO15229 486 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 STX10O60499 249 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 ENTPD6O75354 484 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 DCTN3O75935 186 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 SLC22A5O76082 557 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 ZNF432O94892 652 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 GLSO94925 669 aaPredicted RBP3.36□□□□□ -1.87
PTCD3-214ENST00000483925 SOX14O95416 240 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 AMBPP02760 352 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 RPSAP08865 295 aaKnown RBP3.36□□□□□ -1.87
PTCD3-214ENST00000483925 GNAO1P09471 354 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 GGT2P36268 569 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 OMPP47874 163 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 IDH3GP51553 393 aaPredicted RBP3.36□□□□□ -1.87
PTCD3-214ENST00000483925 KRTAP10-5P60370 271 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 CXCR4P61073 352 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 ERVS71-1P61550 626 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 ZNF45Q02386 682 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 PAX8Q06710 450 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 BAXQ07812 192 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 CYP24A1Q07973 514 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 SGCAQ16586 387 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 ZNF630Q2M218 657 aaPredicted RBP3.36□□□□□ -1.87
PTCD3-214ENST00000483925 TMEM176BQ3YBM2 270 aaPredicted RBP3.36□□□□□ -1.87
PTCD3-214ENST00000483925 TTC32Q5I0X7 151 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 CASC10Q5T4H9 136 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 C11orf72Q8NBR9 251 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 OR11H7Q8NGC8 314 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 OR10AD1Q8NGE0 317 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 OR52E4Q8NGH9 312 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 STOML3Q8TAV4 291 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 RNF138Q8WVD3 245 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 HGDQ93099 445 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 NTAN1Q96AB6 310 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 CREB3L1Q96BA8 519 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 TESCQ96BS2 214 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 SMIM12Q96EX1 92 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 RNF185Q96GF1 192 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 FAM19A4Q96LR4 140 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 ZNF599Q96NL3 588 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 PGLYRP2Q96PD5 576 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 LITAFQ99732 161 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 TMEM208Q9BTX3 173 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 TMED9Q9BVK6 235 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 UBXN6Q9BZV1 441 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 OR11A1Q9GZK7 315 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 PARP12Q9H0J9 701 aaKnown RBP3.36□□□□□ -1.87
PTCD3-214ENST00000483925 SLC2A9Q9NRM0 540 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 FKBP14Q9NWM8 211 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 FAM206AQ9NX38 181 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 TAS2R13Q9NYV9 303 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 VAX2Q9UIW0 290 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 NDRG2Q9UN36 371 aaKnown RBP3.36□□□□□ -1.87
PTCD3-214ENST00000483925 V9GYQ6 96 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 PCDH11XQ9BZA7 1347 aa3.36□□□□□ -1.87
PTCD3-214ENST00000483925 FER1L5A0AVI2 2057 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 A0A0G2JN53 185 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 TINCRA0A1B0GVN0 87 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 EPM2AB3EWF7 344 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 KCNK1O00180 336 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 PEX7O00628 323 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 FAM189A1O60320 539 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 SERF1AO75920 110 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 CTDNEP1O95476 244 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 BCHEP06276 602 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 CHTF8P0CG12 524 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 ATF1P18846 271 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 PRPS1L1P21108 318 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 MSNP26038 577 aaKnown RBP3.35□□□□□ -1.87
PTCD3-214ENST00000483925 HSPA13P48723 471 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 ERFP50548 548 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 P2RY4P51582 365 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 CACNG7P62955 275 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 AESQ08117 197 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 PPIDQ08752 370 aaKnown RBP3.35□□□□□ -1.87
PTCD3-214ENST00000483925 SPA17Q15506 151 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 NSDHLQ15738 373 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 HLA-DRB5Q30154 266 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 FBXL22Q6P050 247 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 ZNF493Q6ZR52 646 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 STRADAQ7RTN6 431 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 FAM19A5Q7Z5A7 132 aaPredicted RBP3.35□□□□□ -1.87
PTCD3-214ENST00000483925 CPNE9Q8IYJ1 553 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 TMEM61Q8N0U2 210 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms