RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 VEGFCP49767 419 aa12.1□□□□□ -0.47
CLK3-204ENST00000483723 ATP1B3P54709 279 aa12.1□□□□□ -0.47
CLK3-204ENST00000483723 RPS27AP62979 156 aaKnown RBP12.1□□□□□ -0.47
CLK3-204ENST00000483723 MRPL49Q13405 166 aaKnown RBP12.1□□□□□ -0.47
CLK3-204ENST00000483723 HLXQ14774 488 aaPredicted RBP12.1□□□□□ -0.47
CLK3-204ENST00000483723 ZNF474Q6S9Z5 364 aaPredicted RBP12.1□□□□□ -0.47
CLK3-204ENST00000483723 RFPL4BQ6ZWI9 263 aa12.1□□□□□ -0.47
CLK3-204ENST00000483723 PXT1Q8NFP0 134 aa12.1□□□□□ -0.47
CLK3-204ENST00000483723 UPRTQ96BW1 309 aa12.1□□□□□ -0.47
CLK3-204ENST00000483723 BORCS8Q96FH0 119 aa12.1□□□□□ -0.47
CLK3-204ENST00000483723 URM1Q9BTM9 101 aaKnown RBP12.1□□□□□ -0.47
CLK3-204ENST00000483723 TMEM59Q9BXS4 323 aa12.1□□□□□ -0.47
CLK3-204ENST00000483723 CACNG6Q9BXT2 260 aa12.1□□□□□ -0.47
CLK3-204ENST00000483723 CST11Q9H112 138 aa12.1□□□□□ -0.47
CLK3-204ENST00000483723 COPZ2Q9P299 210 aa12.1□□□□□ -0.47
CLK3-204ENST00000483723 ZNF107Q9UII5 783 aaPredicted RBP12.1□□□□□ -0.47
CLK3-204ENST00000483723 SLC7A11Q9UPY5 501 aa12.1□□□□□ -0.47
CLK3-204ENST00000483723 A0A0B4J293 547 aa12.09□□□□□ -0.47
CLK3-204ENST00000483723 A0A1W2PP11 408 aa12.09□□□□□ -0.47
CLK3-204ENST00000483723 A0A1W2PR80 420 aa12.09□□□□□ -0.47
CLK3-204ENST00000483723 CD300LBA8K4G0 201 aa12.09□□□□□ -0.47
CLK3-204ENST00000483723 PRRG2O14669 202 aa12.09□□□□□ -0.47
CLK3-204ENST00000483723 IGLV1-44P01699 117 aa12.09□□□□□ -0.47
CLK3-204ENST00000483723 TCRBP04435 133 aa12.09□□□□□ -0.47
CLK3-204ENST00000483723 IDH3GP51553 393 aaPredicted RBP12.09□□□□□ -0.47
CLK3-204ENST00000483723 TMEM50BP56557 158 aa12.09□□□□□ -0.47
CLK3-204ENST00000483723 CDNFQ49AH0 187 aa12.09□□□□□ -0.47
CLK3-204ENST00000483723 SLC22A6Q4U2R8 563 aa12.09□□□□□ -0.47
CLK3-204ENST00000483723 FBXW12Q6X9E4 464 aa12.09□□□□□ -0.47
CLK3-204ENST00000483723 BHLHA15Q7RTS1 189 aaPredicted RBP12.09□□□□□ -0.47
CLK3-204ENST00000483723 OR5D18Q8NGL1 313 aa12.09□□□□□ -0.47
CLK3-204ENST00000483723 GAL3ST1Q99999 423 aa12.09□□□□□ -0.47
CLK3-204ENST00000483723 NICN1Q9BSH3 213 aa12.09□□□□□ -0.47
CLK3-204ENST00000483723 BANF2Q9H503 90 aa12.09□□□□□ -0.47
CLK3-204ENST00000483723 MRPL15Q9P015 296 aaKnown RBP12.09□□□□□ -0.47
CLK3-204ENST00000483723 NUBP2Q9Y5Y2 271 aa12.09□□□□□ -0.47
CLK3-204ENST00000483723 ACACBO00763 2458 aa12.09□□□□□ -0.47
CLK3-204ENST00000483723 FAM230AA0A1W2PPH8 454 aa12.08□□□□□ -0.47
CLK3-204ENST00000483723 OR5H1A6NKK0 313 aa12.08□□□□□ -0.47
CLK3-204ENST00000483723 ZNF850A8MQ14 1090 aa12.08□□□□□ -0.47
CLK3-204ENST00000483723 INMT-MINDY4F8WBC2 141 aa12.08□□□□□ -0.47
CLK3-204ENST00000483723 MT-ND4P03905 459 aa12.08□□□□□ -0.47
CLK3-204ENST00000483723 GSTP1P09211 210 aaKnown RBP12.08□□□□□ -0.47
CLK3-204ENST00000483723 CSF1P09603 554 aa12.08□□□□□ -0.47
CLK3-204ENST00000483723 GIFP27352 417 aa12.08□□□□□ -0.47
CLK3-204ENST00000483723 RAG2P55895 527 aa12.08□□□□□ -0.47
CLK3-204ENST00000483723 ST3GAL2Q16842 350 aa12.08□□□□□ -0.47
CLK3-204ENST00000483723 TMEM255AQ5JRV8 349 aa12.08□□□□□ -0.47
CLK3-204ENST00000483723 Q6ZTK2 550 aa12.08□□□□□ -0.47
CLK3-204ENST00000483723 STEAP2Q8NFT2 490 aa12.08□□□□□ -0.47
CLK3-204ENST00000483723 OR56B1Q8NGI3 324 aa12.08□□□□□ -0.47
CLK3-204ENST00000483723 CMBLQ96DG6 245 aa12.08□□□□□ -0.47
CLK3-204ENST00000483723 SELENOIQ9C0D9 397 aa12.08□□□□□ -0.47
CLK3-204ENST00000483723 CDH20Q9HBT6 801 aa12.08□□□□□ -0.47
CLK3-204ENST00000483723 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.08□□□□□ -0.474e-6■■■□□ 18.6
CLK3-204ENST00000483723 IL36GQ9NZH8 169 aa12.08□□□□□ -0.47
CLK3-204ENST00000483723 CRIM1Q9NZV1 1036 aa12.08□□□□□ -0.47
CLK3-204ENST00000483723 EIF3KQ9UBQ5 218 aaKnown RBP12.08□□□□□ -0.47
CLK3-204ENST00000483723 AMDHD2Q9Y303 409 aa12.08□□□□□ -0.47
CLK3-204ENST00000483723 PTPRQQ9UMZ3 2332 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 PQLC2LA1A4F0 135 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 MSTNO14793 375 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 SOCS1O15524 211 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 SMPD2O60906 423 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 CRTAPO75718 401 aaPredicted RBP12.08□□□□□ -0.48
CLK3-204ENST00000483723 TMEM225BP0DP42 221 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 ZNF35P13682 527 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 MGMTP16455 207 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 HLA-DMAP28067 261 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 ACTBP60709 375 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 ACTG1P63261 375 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 PDZK1IP1Q13113 114 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 PRDX4Q13162 271 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 CEACAM21Q3KPI0 293 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 PLAC9Q5JTB6 97 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 C1QTNF12Q5T7M4 302 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 RSBN1Q5VWQ0 802 aaPredicted RBP12.08□□□□□ -0.48
CLK3-204ENST00000483723 PLCXD3Q63HM9 321 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 GFRALQ6UXV0 394 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 BTN2A1Q7KYR7 527 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 ZSCAN4Q8NAM6 433 aaPredicted RBP12.08□□□□□ -0.48
CLK3-204ENST00000483723 TMEM229BQ8NBD8 167 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 Q8NFD4 153 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 RNF170Q96K19 258 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 S100A13Q99584 98 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 FGF23Q9GZV9 251 aaPredicted RBP12.08□□□□□ -0.48
CLK3-204ENST00000483723 METTL9Q9H1A3 318 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 ASF1BQ9NVP2 202 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 GPR160Q9UJ42 338 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 ELF5Q9UKW6 265 aaPredicted RBP12.08□□□□□ -0.48
CLK3-204ENST00000483723 KCNK7Q9Y2U2 307 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 MPC1Q9Y5U8 109 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 SLC25A15Q9Y619 301 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 SVILO95425 2214 aa12.08□□□□□ -0.48
CLK3-204ENST00000483723 TMEM8BA6NDV4 472 aa12.07□□□□□ -0.48
CLK3-204ENST00000483723 TMEM235A6NFC5 223 aa12.07□□□□□ -0.48
CLK3-204ENST00000483723 ZNF780AO75290 641 aaPredicted RBP12.07□□□□□ -0.48
CLK3-204ENST00000483723 TRAPPC2P0DI81 140 aa12.07□□□□□ -0.48
CLK3-204ENST00000483723 TRAPPC2BP0DI82 140 aa12.07□□□□□ -0.48
CLK3-204ENST00000483723 PSMB1P20618 241 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms