RNA–Protein interactions for RNA: ENST00000482741.1

TVP23B-203, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 3,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-203ENST00000482741 EWSR1Q01844 656 aaKnown RBP eCLIP6.61□□□□□ -1.35
TVP23B-203ENST00000482741 ECH1Q13011 328 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 AGAP6Q5VW22 663 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 IL17RELQ6ZVW7 336 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 PIK3R3Q92569 461 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 TAAR8Q969N4 342 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 RAB39BQ96DA2 213 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 PTGES2Q9H7Z7 377 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 SDK1Q7Z5N4 2213 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 ANP32DO95626 131 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 PLA2G1BP04054 148 aaKnown RBP6.61□□□□□ -1.35
TVP23B-203ENST00000482741 SERPIND1P05546 499 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 GP1BBP13224 206 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 ERVK-25P63136 954 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 TAF13Q15543 124 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 OR1C1Q15619 314 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 KLK9Q2XQG4 91 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 ACSF3Q4G176 576 aaPredicted RBP6.61□□□□□ -1.35
TVP23B-203ENST00000482741 MESTQ5EB52 335 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 DMKNQ6E0U4 476 aaPredicted RBP6.61□□□□□ -1.35
TVP23B-203ENST00000482741 SATL1Q86VE3 508 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 ZNF761Q86XN6 746 aaPredicted RBP6.61□□□□□ -1.35
TVP23B-203ENST00000482741 CENPSQ8N2Z9 138 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 SLC26A10Q8NG04 563 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 OR10G3Q8NGC4 313 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 OR1B1Q8NGR6 318 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 OR1J4Q8NGS1 313 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 RNF133Q8WVZ7 376 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 UHRF2Q96PU4 802 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 TPK1Q9H3S4 243 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 ZNF224Q9NZL3 707 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 CYB5R1Q9UHQ9 305 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 KLK9Q9UKQ9 250 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 AMDHD2Q9Y303 409 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 DPPA5A6NC42 116 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 CDC42EP2O14613 210 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 NBR2O15453 112 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 TNFSF13O75888 250 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 WISP2O76076 250 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 RAB3DO95716 219 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 WDPCPO95876 746 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 ZNF12P17014 697 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 IFNA8P32881 189 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 HPCAP84074 193 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 EFNB3Q15768 340 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 SSX1Q16384 188 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 SLC27A4Q6P1M0 643 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 ABHD12BQ7Z5M8 362 aaPredicted RBP6.61□□□□□ -1.35
TVP23B-203ENST00000482741 GALNT10Q86SR1 603 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 OR2T33Q8NG76 320 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 FANK1Q8TC84 345 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 MITD1Q8WV92 249 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 SNAPC3Q92966 411 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 RAB1BQ9H0U4 201 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 LINC00574Q9H8X3 128 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 SP140LQ9H930 580 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 SPRR3Q9UBC9 169 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 OAZ3Q9UMX2 235 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 KLHDC2Q9Y2U9 406 aa6.61□□□□□ -1.35
TVP23B-203ENST00000482741 C5orf58C9J3I9 102 aa6.6□□□□□ -1.35
TVP23B-203ENST00000482741 LRATO95237 230 aa6.6□□□□□ -1.35
TVP23B-203ENST00000482741 DBTP11182 482 aaKnown RBP6.6□□□□□ -1.35
TVP23B-203ENST00000482741 ANXA3P12429 323 aa6.6□□□□□ -1.35
TVP23B-203ENST00000482741 IGFBP5P24593 272 aa6.6□□□□□ -1.35
TVP23B-203ENST00000482741 CRABP1P29762 137 aa6.6□□□□□ -1.35
TVP23B-203ENST00000482741 OPRL1P41146 370 aa6.6□□□□□ -1.35
TVP23B-203ENST00000482741 ACTA2P62736 377 aa6.6□□□□□ -1.35
TVP23B-203ENST00000482741 ACTG2P63267 376 aa6.6□□□□□ -1.35
TVP23B-203ENST00000482741 P2RY6Q15077 328 aa6.6□□□□□ -1.35
TVP23B-203ENST00000482741 PTGES3Q15185 160 aaKnown RBP6.6□□□□□ -1.35
TVP23B-203ENST00000482741 ZNF474Q6S9Z5 364 aaPredicted RBP6.6□□□□□ -1.35
TVP23B-203ENST00000482741 BCDIN3DQ7Z5W3 292 aaKnown RBP6.6□□□□□ -1.35
TVP23B-203ENST00000482741 TMEM251Q8N6I4 163 aa6.6□□□□□ -1.35
TVP23B-203ENST00000482741 MARCH1Q8TCQ1 289 aa6.6□□□□□ -1.35
TVP23B-203ENST00000482741 GTF3AQ92664 365 aaKnown RBP6.6□□□□□ -1.35
TVP23B-203ENST00000482741 ZG16BQ96DA0 208 aa6.6□□□□□ -1.35
TVP23B-203ENST00000482741 SIGLEC12Q96PQ1 595 aa6.6□□□□□ -1.35
TVP23B-203ENST00000482741 NIPSNAP1Q9BPW8 284 aa6.6□□□□□ -1.35
TVP23B-203ENST00000482741 URM1Q9BTM9 101 aaKnown RBP6.6□□□□□ -1.35
TVP23B-203ENST00000482741 RPL36Q9Y3U8 105 aaKnown RBP6.6□□□□□ -1.35
TVP23B-203ENST00000482741 CDH23Q9H251 3354 aa6.6□□□□□ -1.35
TVP23B-203ENST00000482741 SPAARA0A1B0GVQ0 90 aa6.6□□□□□ -1.35
TVP23B-203ENST00000482741 TRABD2BA6NFA1 517 aa6.6□□□□□ -1.35
TVP23B-203ENST00000482741 PSMB1P20618 241 aaKnown RBP6.6□□□□□ -1.35
TVP23B-203ENST00000482741 CA7P43166 264 aa6.6□□□□□ -1.35
TVP23B-203ENST00000482741 SRYQ05066 204 aa6.6□□□□□ -1.35
TVP23B-203ENST00000482741 CDK5R1Q15078 307 aa6.6□□□□□ -1.35
TVP23B-203ENST00000482741 CRIP3Q6Q6R5 217 aa6.6□□□□□ -1.35
TVP23B-203ENST00000482741 NUFIP2Q7Z417 695 aaKnown RBP6.6□□□□□ -1.35
TVP23B-203ENST00000482741 POC1AQ8NBT0 407 aa6.6□□□□□ -1.35
TVP23B-203ENST00000482741 SLC37A3Q8NCC5 494 aa6.6□□□□□ -1.35
TVP23B-203ENST00000482741 CPEB3Q8NE35 698 aaKnown RBP6.6□□□□□ -1.35
TVP23B-203ENST00000482741 GPR151Q8TDV0 419 aa6.6□□□□□ -1.35
TVP23B-203ENST00000482741 MAL2Q969L2 176 aa6.6□□□□□ -1.35
TVP23B-203ENST00000482741 NPAS1Q99742 590 aa6.6□□□□□ -1.35
TVP23B-203ENST00000482741 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.6□□□□□ -1.35
TVP23B-203ENST00000482741 HEATR5AQ86XA9 2040 aa6.6□□□□□ -1.35
TVP23B-203ENST00000482741 TRBV6-6A0A0A6YYG2 114 aa6.59□□□□□ -1.35
TVP23B-203ENST00000482741 HLA-DQA2P01906 255 aa6.59□□□□□ -1.35
TVP23B-203ENST00000482741 CCNOP22674 350 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms