RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 MTFP1Q9UDX5 166 aa6.77□□□□□ -1.33
SNX13-208ENST00000482558 CYB5R1Q9UHQ9 305 aa6.77□□□□□ -1.33
SNX13-208ENST00000482558 VDAC3Q9Y277 283 aa6.77□□□□□ -1.33
SNX13-208ENST00000482558 ASXL3Q9C0F0 2248 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 NSG1A0A0A6YYJ2 146 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 A0A1W2PRX2 142 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 ZNF878C9JN71 531 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 SULT2B1O00204 365 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 CTAG2O75638 210 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 CBR3O75828 277 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 MAS1P04201 325 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 MELTFP08582 738 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 AKAIN1P0CW23 69 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 VPREB1P12018 145 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 GABRA1P14867 456 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 ANXA7P20073 488 aaKnown RBP6.76□□□□□ -1.33
SNX13-208ENST00000482558 CSRP1P21291 193 aaKnown RBP6.76□□□□□ -1.33
SNX13-208ENST00000482558 DNASE1P24855 282 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 RCVRNP35243 200 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 BIDP55957 195 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 GRB2P62993 217 aaKnown RBP6.76□□□□□ -1.33
SNX13-208ENST00000482558 MELKQ14680 651 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 RBMS2Q15434 407 aaKnown RBP6.76□□□□□ -1.33
SNX13-208ENST00000482558 DCAF12Q5T6F0 453 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 OR7E24Q6IFN5 339 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 FAM198BQ6UWH4 519 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 PGAP1Q75T13 922 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 ADGRE4PQ86SQ3 457 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 IZUMO1Q8IYV9 350 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 STEAP2Q8NFT2 490 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 OR13C3Q8NGS6 347 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 OR52I2Q8NH67 350 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 PAQR8Q8TEZ7 354 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 C2CD4CQ8TF44 421 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 CCDC107Q8WV48 283 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 NTNG2Q96CW9 530 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 C10orf35Q96D05 121 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 ARL5BQ96KC2 179 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 GPHA2Q96T91 129 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 GAL3ST1Q99999 423 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 PIGQQ9BRB3 760 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 TMEM246Q9BRR3 403 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 SF3B5Q9BWJ5 86 aaKnown RBP6.76□□□□□ -1.33
SNX13-208ENST00000482558 ULBP3Q9BZM4 244 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 ALX4Q9H161 411 aaPredicted RBP6.76□□□□□ -1.33
SNX13-208ENST00000482558 C20orf85Q9H1P6 137 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 CDCP1Q9H5V8 836 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 MSL2Q9HCI7 577 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 GALNT9Q9HCQ5 603 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 OCIAD1Q9NX40 245 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 ANKRD10Q9NXR5 420 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 SLC39A1Q9NY26 324 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 SCP2D1Q9UJQ7 156 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 RAB22AQ9UL26 194 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 CLEC4AQ9UMR7 237 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 MRPS18CQ9Y3D5 142 aaKnown RBP6.76□□□□□ -1.33
SNX13-208ENST00000482558 MAB21L2Q9Y586 359 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 CHCHD2Q9Y6H1 151 aaPredicted RBP6.76□□□□□ -1.33
SNX13-208ENST00000482558 FER1L5A0AVI2 2057 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 PI4KAP42356 2102 aa6.76□□□□□ -1.33
SNX13-208ENST00000482558 CPAMD8Q8IZJ3 1885 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 TRAV8-7A0A075B6U6 113 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 MEIKINA0A087WXM9 373 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 LOC107986453A0A1B0GWG9 222 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 UBE2QL1A1L167 161 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 C4orf47A7E2U8 309 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 SSNA1O43805 119 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 CREBL2O60519 120 aaPredicted RBP6.75□□□□□ -1.33
SNX13-208ENST00000482558 CDC14BO60729 498 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 KLF7O75840 302 aaPredicted RBP6.75□□□□□ -1.33
SNX13-208ENST00000482558 NDUFB6O95139 128 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 LCATP04180 440 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 LIPFP07098 398 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 CHRM2P08172 466 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 GSTT2P0CG29 244 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 UBBP0CG47 229 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 PGA4P0DJD7 388 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 PGA3P0DJD8 388 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 SULT1A3P0DMM9 295 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 SULT1A4P0DMN0 295 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 COX6A1P12074 109 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 TBPP20226 339 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 BDKRB2P30411 391 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 OTX2P32243 289 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 POU3F4P49335 361 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 SRP9P49458 86 aaKnown RBP6.75□□□□□ -1.33
SNX13-208ENST00000482558 ZNF133P52736 654 aaPredicted RBP6.75□□□□□ -1.33
SNX13-208ENST00000482558 NKX2-5P52952 324 aaPredicted RBP6.75□□□□□ -1.33
SNX13-208ENST00000482558 ATP5IP56385 69 aaPredicted RBP6.75□□□□□ -1.33
SNX13-208ENST00000482558 MLF1P58340 268 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 TAS2R19P59542 299 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 IFITM2Q01629 132 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 MEF2DQ14814 521 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 ARL6IP1Q15041 203 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 TAF13Q15543 124 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 HIST3H3Q16695 136 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 C10orf128Q5T292 105 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 OR5M10Q6IEU7 315 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 TMEM53Q6P2H8 277 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 SLC25A47Q6Q0C1 308 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms