RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 DCUN1D4Q92564 292 aa16.94■□□□□ 0.3
CCM2-214ENST00000481194 SCNM1Q9BWG6 230 aa16.94■□□□□ 0.3
CCM2-214ENST00000481194 LSM5Q9Y4Y9 91 aaKnown RBP16.94■□□□□ 0.3
CCM2-214ENST00000481194 U3KQA8 63 aa16.94■□□□□ 0.3
CCM2-214ENST00000481194 CA6P23280 308 aa16.94■□□□□ 0.3
CCM2-214ENST00000481194 OR51S1Q8NGJ8 323 aa16.94■□□□□ 0.3
CCM2-214ENST00000481194 AIFM2Q9BRQ8 373 aa16.94■□□□□ 0.3
CCM2-214ENST00000481194 FAM122BQ7Z309 247 aa16.93■□□□□ 0.3
CCM2-214ENST00000481194 Q6ZNX1 250 aa16.93■□□□□ 0.3
CCM2-214ENST00000481194 NOXA1Q86UR1 476 aa16.93■□□□□ 0.3
CCM2-214ENST00000481194 LGI3Q8N145 548 aa16.93■□□□□ 0.3
CCM2-214ENST00000481194 AUNIPQ9H7T9 357 aa16.93■□□□□ 0.3
CCM2-214ENST00000481194 PLEKHF2Q9H8W4 249 aa16.93■□□□□ 0.3
CCM2-214ENST00000481194 TMEM30CPA0ZSE6 113 aa16.93■□□□□ 0.3
CCM2-214ENST00000481194 ZIC3O60481 467 aa16.93■□□□□ 0.3
CCM2-214ENST00000481194 PPP3CBP16298 524 aa16.93■□□□□ 0.3
CCM2-214ENST00000481194 RRAS2P62070 204 aaPredicted RBP16.93■□□□□ 0.3
CCM2-214ENST00000481194 HIKESHIQ53FT3 197 aa16.93■□□□□ 0.3
CCM2-214ENST00000481194 CD276Q5ZPR3 534 aa16.93■□□□□ 0.3
CCM2-214ENST00000481194 NHLRC1Q6VVB1 395 aa16.93■□□□□ 0.3
CCM2-214ENST00000481194 DENND4CQ5VZ89 1909 aa16.93■□□□□ 0.3
CCM2-214ENST00000481194 MED6O75586 246 aa16.93■□□□□ 0.3
CCM2-214ENST00000481194 ZNF708P17019 499 aa16.93■□□□□ 0.3
CCM2-214ENST00000481194 FSTP19883 344 aa16.93■□□□□ 0.3
CCM2-214ENST00000481194 SLC9A3R2Q15599 337 aa16.93■□□□□ 0.3
CCM2-214ENST00000481194 NRN1LQ496H8 165 aa16.93■□□□□ 0.3
CCM2-214ENST00000481194 MDP1Q86V88 176 aa16.93■□□□□ 0.3
CCM2-214ENST00000481194 FAM185AQ8N0U4 392 aa16.93■□□□□ 0.3
CCM2-214ENST00000481194 FAM58AQ8N1B3 248 aa16.93■□□□□ 0.3
CCM2-214ENST00000481194 HRASLSQ9HDD0 168 aa16.93■□□□□ 0.3
CCM2-214ENST00000481194 SLC7A10Q9NS82 523 aa16.93■□□□□ 0.3
CCM2-214ENST00000481194 CCL21O00585 134 aa16.92■□□□□ 0.3
CCM2-214ENST00000481194 SPRY3O43610 288 aa16.92■□□□□ 0.3
CCM2-214ENST00000481194 TOXO94900 526 aa16.92■□□□□ 0.3
CCM2-214ENST00000481194 EDN3P14138 238 aa16.92■□□□□ 0.3
CCM2-214ENST00000481194 LUMP51884 338 aaPredicted RBP16.92■□□□□ 0.3
CCM2-214ENST00000481194 GABRA6Q16445 453 aa16.92■□□□□ 0.3
CCM2-214ENST00000481194 OR1K1Q8NGR3 316 aa16.92■□□□□ 0.3
CCM2-214ENST00000481194 UPRTQ96BW1 309 aa16.92■□□□□ 0.3
CCM2-214ENST00000481194 TIMP4Q99727 224 aa16.92■□□□□ 0.3
CCM2-214ENST00000481194 CHST5Q9GZS9 411 aa16.92■□□□□ 0.3
CCM2-214ENST00000481194 OR5V1Q9UGF6 321 aa16.92■□□□□ 0.3
CCM2-214ENST00000481194 PCDHGA9Q9Y5G4 932 aaKnown RBP16.92■□□□□ 0.3
CCM2-214ENST00000481194 CDC14BO60729 498 aa16.92■□□□□ 0.3
CCM2-214ENST00000481194 AKR1D1P51857 326 aa16.92■□□□□ 0.3
CCM2-214ENST00000481194 RDH5Q92781 318 aa16.92■□□□□ 0.3
CCM2-214ENST00000481194 CLPSP04118 112 aa16.92■□□□□ 0.3
CCM2-214ENST00000481194 CD79BP40259 229 aa16.92■□□□□ 0.3
CCM2-214ENST00000481194 NBL1P41271 181 aa16.92■□□□□ 0.3
CCM2-214ENST00000481194 FBXO17Q96EF6 278 aa16.92■□□□□ 0.3
CCM2-214ENST00000481194 HIST1H1DP16402 221 aaKnown RBP16.91■□□□□ 0.3
CCM2-214ENST00000481194 ARRDC1Q8N5I2 433 aa16.91■□□□□ 0.3
CCM2-214ENST00000481194 MEIKINA0A087WXM9 373 aa16.91■□□□□ 0.3
CCM2-214ENST00000481194 J3QW42 95 aa16.91■□□□□ 0.3
CCM2-214ENST00000481194 OR52N4Q8NGI2 321 aa16.91■□□□□ 0.3
CCM2-214ENST00000481194 KLHDC2Q9Y2U9 406 aa16.91■□□□□ 0.3
CCM2-214ENST00000481194 ISG15P05161 165 aa16.91■□□□□ 0.3
CCM2-214ENST00000481194 CCR6P51684 374 aa16.91■□□□□ 0.3
CCM2-214ENST00000481194 TNFAIP6P98066 277 aaPredicted RBP16.91■□□□□ 0.3
CCM2-214ENST00000481194 RAB31Q13636 194 aa16.91■□□□□ 0.3
CCM2-214ENST00000481194 OXA1LQ15070 435 aa16.91■□□□□ 0.3
CCM2-214ENST00000481194 LINC00596Q86U02 117 aa16.91■□□□□ 0.3
CCM2-214ENST00000481194 OR5H6Q8NGV6 325 aa16.91■□□□□ 0.3
CCM2-214ENST00000481194 EXTL1Q92935 676 aa16.91■□□□□ 0.3
CCM2-214ENST00000481194 TAAR3PQ9P1P4 343 aa16.91■□□□□ 0.3
CCM2-214ENST00000481194 LILRB2Q8N423 598 aa16.91■□□□□ 0.3
CCM2-214ENST00000481194 POFUT1Q9H488 388 aa16.91■□□□□ 0.3
CCM2-214ENST00000481194 ABCD4O14678 606 aa16.9■□□□□ 0.3
CCM2-214ENST00000481194 CTDSPLO15194 276 aa16.9■□□□□ 0.3
CCM2-214ENST00000481194 TUSC2O75896 110 aa16.9■□□□□ 0.3
CCM2-214ENST00000481194 SLC36A1Q7Z2H8 476 aa16.9■□□□□ 0.3
CCM2-214ENST00000481194 OR4D6Q8NGJ1 314 aa16.9■□□□□ 0.3
CCM2-214ENST00000481194 LRRC20Q8TCA0 184 aa16.9■□□□□ 0.3
CCM2-214ENST00000481194 ST7LQ8TDW4 575 aa16.9■□□□□ 0.3
CCM2-214ENST00000481194 CNTD2Q9H8S5 307 aa16.9■□□□□ 0.3
CCM2-214ENST00000481194 CTAG2O75638 210 aa16.9■□□□□ 0.3
CCM2-214ENST00000481194 PSG4Q00888 419 aa16.9■□□□□ 0.3
CCM2-214ENST00000481194 OR5A2Q8NGI9 324 aa16.9■□□□□ 0.3
CCM2-214ENST00000481194 NUDCD2Q8WVJ2 157 aa16.9■□□□□ 0.3
CCM2-214ENST00000481194 ELMOD3Q96FG2 381 aa16.9■□□□□ 0.3
CCM2-214ENST00000481194 PLEKHB1Q9UF11 243 aaPredicted RBP16.9■□□□□ 0.3
CCM2-214ENST00000481194 ZSCAN5BA6NJL1 495 aa16.9■□□□□ 0.3
CCM2-214ENST00000481194 TDGF1P13385 188 aa16.9■□□□□ 0.3
CCM2-214ENST00000481194 ZFP62Q8NB50 900 aaPredicted RBP16.9■□□□□ 0.3
CCM2-214ENST00000481194 EDARADDQ8WWZ3 215 aa16.9■□□□□ 0.3
CCM2-214ENST00000481194 NPY4RP50391 375 aa16.9■□□□□ 0.3
CCM2-214ENST00000481194 OR10K2Q6IF99 312 aa16.9■□□□□ 0.3
CCM2-214ENST00000481194 LRRC75AQ8NAA5 344 aa16.9■□□□□ 0.3
CCM2-214ENST00000481194 ASB13Q8WXK3 278 aa16.9■□□□□ 0.3
CCM2-214ENST00000481194 ZNF2Q9BSG1 426 aaPredicted RBP16.9■□□□□ 0.3
CCM2-214ENST00000481194 MPPED1O15442 326 aa16.89■□□□□ 0.3
CCM2-214ENST00000481194 LTC4SQ16873 150 aa16.89■□□□□ 0.3
CCM2-214ENST00000481194 MICBQ29980 383 aa16.89■□□□□ 0.3
CCM2-214ENST00000481194 LRRC10Q5BKY1 277 aa16.89■□□□□ 0.3
CCM2-214ENST00000481194 HINT2Q9BX68 163 aa16.89■□□□□ 0.3
CCM2-214ENST00000481194 LYPD3O95274 346 aa16.89■□□□□ 0.29
CCM2-214ENST00000481194 RFPL3SP0C7P2 107 aa16.89■□□□□ 0.29
CCM2-214ENST00000481194 FDX2Q6P4F2 183 aa16.89■□□□□ 0.29
CCM2-214ENST00000481194 ZBTB8BQ8NAP8 495 aaPredicted RBP16.89■□□□□ 0.29
CCM2-214ENST00000481194 SUN5Q8TC36 379 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms