RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	ANKRD60	Q9BZ19	345 aa		0.94	□□□□□ -2.26
CCNL1-223	ENST00000481173	TM6SF2	Q9BZW4	377 aa		0.94	□□□□□ -2.26
CCNL1-223	ENST00000481173	TOLLIP	Q9H0E2	274 aa		0.94	□□□□□ -2.26
CCNL1-223	ENST00000481173	DEFB129	Q9H1M3	183 aa		0.94	□□□□□ -2.26
CCNL1-223	ENST00000481173	GAL3ST2	Q9H3Q3	398 aa		0.94	□□□□□ -2.26
CCNL1-223	ENST00000481173	TMEM38A	Q9H6F2	299 aa		0.94	□□□□□ -2.26
CCNL1-223	ENST00000481173	ARMC7	Q9H6L4	198 aa		0.94	□□□□□ -2.26
CCNL1-223	ENST00000481173	C8orf33	Q9H7E9	229 aa	Predicted RBP	0.94	□□□□□ -2.26
CCNL1-223	ENST00000481173	MYOZ1	Q9NP98	299 aa	Predicted RBP	0.94	□□□□□ -2.26
CCNL1-223	ENST00000481173	MED4	Q9NPJ6	270 aa		0.94	□□□□□ -2.26
CCNL1-223	ENST00000481173	AHSP	Q9NZD4	102 aa		0.94	□□□□□ -2.26
CCNL1-223	ENST00000481173	ZNF492	Q9P255	531 aa		0.94	□□□□□ -2.26
CCNL1-223	ENST00000481173	MTFP1	Q9UDX5	166 aa		0.94	□□□□□ -2.26
CCNL1-223	ENST00000481173	YARS2	Q9Y2Z4	477 aa	Known RBP	0.94	□□□□□ -2.26
CCNL1-223	ENST00000481173	COMMD3-BMI1	R4GMX3	469 aa		0.94	□□□□□ -2.26
CCNL1-223	ENST00000481173	LTBP2	Q14767	1821 aa		0.94	□□□□□ -2.26
CCNL1-223	ENST00000481173	UBN2	Q6ZU65	1347 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	LOC100653049	A0A140TA62	436 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	GSTTP1	A0A1W2PQM5	241 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	RAB19	A4D1S5	217 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	ZNF879	B4DU55	563 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	PRAMEF26	H0Y7S4	382 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	TEX46	H3BTG2	121 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	PSMD11	O00231	422 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	SLC9A3R1	O14745	358 aa	Predicted RBP	0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	MYL12B	O14950	172 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	TCAP	O15273	167 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	YKT6	O15498	198 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	GATC	O43716	136 aa	Known RBP	0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	NEMF	O60524	1076 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	SLC19A2	O60779	497 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	UPK1B	O75841	260 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	KRT34	O76011	436 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	AQP8	O94778	261 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	SMC2	O95347	1197 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	TGM6	O95932	706 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	PRB1	P04280	392 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	IVL	P07476	585 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	RHOC	P08134	193 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	HSPD1	P10809	573 aa	Known RBP	0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	GZMA	P12544	262 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	CPN2	P22792	545 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	OR1E1	P30953	314 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	PFN2	P35080	140 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	SPAM1	P38567	509 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	ZNF121	P58317	390 aa	Predicted RBP	0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	LCN2	P80188	198 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	IFITM3	Q01628	133 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	C2orf54	Q08AI8	447 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	TRDN	Q13061	729 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	ILK	Q13418	452 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	ANGPT1	Q15389	498 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	DEGS2	Q6QHC5	323 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	WDR82	Q6UXN9	313 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	NPSR1	Q6W5P4	371 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	NDUFAF7	Q7L592	441 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	MRPL21	Q7Z2W9	205 aa	Known RBP	0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	OR2W3	Q7Z3T1	314 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	ST13P4	Q8IZP2	240 aa	Predicted RBP	0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	TRAM1L1	Q8N609	369 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	ASCC1	Q8N9N2	400 aa	Known RBP	0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	LRRC75A	Q8NAA5	344 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	C11orf72	Q8NBR9	251 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	FBXO36	Q8NEA4	188 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	OR4M1	Q8NGD0	313 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	OR52E2	Q8NGJ4	325 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	OR10Z1	Q8NGY1	313 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	OR6K2	Q8NGY2	324 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	OR6N2	Q8NGY6	317 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	OR52E5	Q8NH55	327 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	CMTM2	Q8TAZ6	248 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	DOK4	Q8TEW6	326 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	ASZ1	Q8WWH4	475 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	ING5	Q8WYH8	240 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	RERG	Q96A58	199 aa	Predicted RBP	0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	ISOC2	Q96AB3	205 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	KIAA1143	Q96AT1	154 aa	Predicted RBP	0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	HAUS1	Q96CS2	278 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	CCDC124	Q96CT7	223 aa	Known RBP	0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	NRBF2	Q96F24	287 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	RNF170	Q96K19	258 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	ZNF396	Q96N95	335 aa	Predicted RBP	0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	ZNF649	Q9BS31	505 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	SAMD10	Q9BYL1	202 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	CHMP4B	Q9H444	224 aa	Known RBP	0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	BEX1	Q9HBH7	125 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	RETN	Q9HD89	108 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	CD209	Q9NNX6	404 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	AGPAT4	Q9NRZ5	378 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	CFL2	Q9Y281	166 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	HES2	Q9Y543	173 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	INSR	P06213	1382 aa		0.93	□□□□□ -2.26
CCNL1-223	ENST00000481173	NPHP4	O75161	1426 aa	Predicted RBP	0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	SMIM26	A0A096LP01	95 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	IGHV3OR16-9	A0A0B4J2B5	98 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	GOLGA8IP	A6NC78	632 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	SLC22A20	A6NK97	555 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	HACD1	B0YJ81	288 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	SEC14L6	B5MCN3	397 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	ANKRD65	E5RJM6	399 aa		0.92	□□□□□ -2.26

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms