RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 ZNF16P17020 682 aaPredicted RBP17.09■□□□□ 0.33
CTSA-206ENST00000480961 TGM4P49221 684 aa17.09■□□□□ 0.33
CTSA-206ENST00000480961 GMFBP60983 142 aa17.09■□□□□ 0.33
CTSA-206ENST00000480961 DOC2BQ14184 412 aa17.09■□□□□ 0.33
CTSA-206ENST00000480961 ZNF181Q2M3W8 571 aa17.09■□□□□ 0.33
CTSA-206ENST00000480961 TMEM42Q69YG0 159 aa17.09■□□□□ 0.33
CTSA-206ENST00000480961 SFRP4Q6FHJ7 346 aaPredicted RBP17.09■□□□□ 0.33
CTSA-206ENST00000480961 LRRC28Q86X40 367 aaPredicted RBP17.09■□□□□ 0.33
CTSA-206ENST00000480961 EGFL6Q8IUX8 553 aa17.09■□□□□ 0.33
CTSA-206ENST00000480961 ZFP41Q8N8Y5 198 aa17.09■□□□□ 0.33
CTSA-206ENST00000480961 OR52N1Q8NH53 320 aa17.09■□□□□ 0.33
CTSA-206ENST00000480961 OR5AK2Q8NH90 309 aa17.09■□□□□ 0.33
CTSA-206ENST00000480961 NPRL2Q8WTW4 380 aa17.09■□□□□ 0.33
CTSA-206ENST00000480961 HPS1Q92902 700 aa17.09■□□□□ 0.33
CTSA-206ENST00000480961 ADAT3Q96EY9 351 aaPredicted RBP17.09■□□□□ 0.33
CTSA-206ENST00000480961 ZNF665Q9H7R5 613 aa17.09■□□□□ 0.33
CTSA-206ENST00000480961 ABCB9Q9NP78 766 aa17.09■□□□□ 0.33
CTSA-206ENST00000480961 PPIAL4EA0A075B759 164 aa17.08■□□□□ 0.32
CTSA-206ENST00000480961 PPIAL4DF5H284 164 aa17.08■□□□□ 0.32
CTSA-206ENST00000480961 PPIAL4FP0DN26 164 aa17.08■□□□□ 0.32
CTSA-206ENST00000480961 EGR1P18146 543 aa17.08■□□□□ 0.32
CTSA-206ENST00000480961 GZMKP49863 264 aa17.08■□□□□ 0.32
CTSA-206ENST00000480961 CDH15P55291 814 aa17.08■□□□□ 0.32
CTSA-206ENST00000480961 MRPL28Q13084 256 aaKnown RBP17.08■□□□□ 0.32
CTSA-206ENST00000480961 C1orf87Q8N0U7 546 aa17.08■□□□□ 0.32
CTSA-206ENST00000480961 SCCPDHQ8NBX0 429 aa17.08■□□□□ 0.32
CTSA-206ENST00000480961 ZNF485Q8NCK3 441 aa17.08■□□□□ 0.32
CTSA-206ENST00000480961 OR5A2Q8NGI9 324 aa17.08■□□□□ 0.32
CTSA-206ENST00000480961 OR13C3Q8NGS6 347 aa17.08■□□□□ 0.32
CTSA-206ENST00000480961 LRRC29Q8WV35 223 aa17.08■□□□□ 0.32
CTSA-206ENST00000480961 ITFG2Q969R8 447 aa17.08■□□□□ 0.32
CTSA-206ENST00000480961 TMEM165Q9HC07 324 aa17.08■□□□□ 0.32
CTSA-206ENST00000480961 YAE1D1Q9NRH1 226 aa17.08■□□□□ 0.32
CTSA-206ENST00000480961 HHLA2Q9UM44 414 aa17.08■□□□□ 0.32
CTSA-206ENST00000480961 PPIAL4AQ9Y536 164 aa17.08■□□□□ 0.32
CTSA-206ENST00000480961 CR1P17927 2039 aa17.08■□□□□ 0.32
CTSA-206ENST00000480961 ANKRD61A6NGH8 418 aa17.07■□□□□ 0.32
CTSA-206ENST00000480961 DHRS7CA6NNS2 312 aa17.07■□□□□ 0.32
CTSA-206ENST00000480961 CD5LO43866 347 aa17.07■□□□□ 0.32
CTSA-206ENST00000480961 IGHV2-5P01817 119 aa17.07■□□□□ 0.32
CTSA-206ENST00000480961 CCDC159P0C7I6 412 aa17.07■□□□□ 0.32
CTSA-206ENST00000480961 GNG3P63215 75 aa17.07■□□□□ 0.32
CTSA-206ENST00000480961 CDK5R1Q15078 307 aa17.07■□□□□ 0.32
CTSA-206ENST00000480961 UBE2V2Q15819 145 aa17.07■□□□□ 0.32
CTSA-206ENST00000480961 RPL22L1Q6P5R6 122 aaKnown RBP17.07■□□□□ 0.32
CTSA-206ENST00000480961 WDR82Q6UXN9 313 aa17.07■□□□□ 0.32
CTSA-206ENST00000480961 GCSAMQ8N6F7 178 aa17.07■□□□□ 0.32
CTSA-206ENST00000480961 CCDC54Q8NEL0 328 aa17.07■□□□□ 0.32
CTSA-206ENST00000480961 TRMT10AQ8TBZ6 339 aaKnown RBP17.07■□□□□ 0.32
CTSA-206ENST00000480961 MYDGFQ969H8 173 aa17.07■□□□□ 0.32
CTSA-206ENST00000480961 OR51I2Q9H344 312 aa17.07■□□□□ 0.32
CTSA-206ENST00000480961 TPRKBQ9Y3C4 175 aa17.07■□□□□ 0.32
CTSA-206ENST00000480961 NIPBLQ6KC79 2804 aaeCLIP17.06■□□□□ 0.32
CTSA-206ENST00000480961 IGHV3OR15-7A0A075B7D8 119 aa17.06■□□□□ 0.32
CTSA-206ENST00000480961 PNMA8CA0A1B0GUJ8 204 aa17.06■□□□□ 0.32
CTSA-206ENST00000480961 FAM230AA0A1W2PPH8 454 aa17.06■□□□□ 0.32
CTSA-206ENST00000480961 TMEM210A6NLX4 147 aa17.06■□□□□ 0.32
CTSA-206ENST00000480961 TMEM212A6NML5 194 aa17.06■□□□□ 0.32
CTSA-206ENST00000480961 MYL12BO14950 172 aa17.06■□□□□ 0.32
CTSA-206ENST00000480961 TGFAP01135 160 aa17.06■□□□□ 0.32
CTSA-206ENST00000480961 ZNF12P17014 697 aa17.06■□□□□ 0.32
CTSA-206ENST00000480961 ZNF20P17024 532 aa17.06■□□□□ 0.32
CTSA-206ENST00000480961 MDH2P40926 338 aaKnown RBP17.06■□□□□ 0.32
CTSA-206ENST00000480961 SLC35A2P78381 396 aa17.06■□□□□ 0.32
CTSA-206ENST00000480961 FAM76BQ5HYJ3 339 aa17.06■□□□□ 0.32
CTSA-206ENST00000480961 NANOGP1Q8N7R0 232 aa17.06■□□□□ 0.32
CTSA-206ENST00000480961 RGP1Q92546 391 aaPredicted RBP17.06■□□□□ 0.32
CTSA-206ENST00000480961 SEH1LQ96EE3 360 aa17.06■□□□□ 0.32
CTSA-206ENST00000480961 TMEM246Q9BRR3 403 aa17.06■□□□□ 0.32
CTSA-206ENST00000480961 COMMD4Q9H0A8 199 aa17.06■□□□□ 0.32
CTSA-206ENST00000480961 TLNRD1Q9H1K6 362 aa17.06■□□□□ 0.32
CTSA-206ENST00000480961 PCDHB10Q9UN67 800 aa17.06■□□□□ 0.32
CTSA-206ENST00000480961 ERGIC3Q9Y282 383 aa17.06■□□□□ 0.32
CTSA-206ENST00000480961 DYSFO75923 2080 aa17.06■□□□□ 0.32
CTSA-206ENST00000480961 OGG1O15527 345 aa17.05■□□□□ 0.32
CTSA-206ENST00000480961 RHBDL1O75783 438 aa17.05■□□□□ 0.32
CTSA-206ENST00000480961 LHBP01229 141 aa17.05■□□□□ 0.32
CTSA-206ENST00000480961 MT-ND2P03891 347 aa17.05■□□□□ 0.32
CTSA-206ENST00000480961 CRHBPP24387 322 aa17.05■□□□□ 0.32
CTSA-206ENST00000480961 SOX2P48431 317 aa17.05■□□□□ 0.32
CTSA-206ENST00000480961 CCDC58Q4VC31 144 aa17.05■□□□□ 0.32
CTSA-206ENST00000480961 HAGHLQ6PII5 290 aaPredicted RBP17.05■□□□□ 0.32
CTSA-206ENST00000480961 LYPD2Q6UXB3 125 aa17.05■□□□□ 0.32
CTSA-206ENST00000480961 SPICQ8N5J4 248 aa17.05■□□□□ 0.32
CTSA-206ENST00000480961 LINC01356Q8N9X3 169 aa17.05■□□□□ 0.32
CTSA-206ENST00000480961 CCDC90BQ9GZT6 254 aa17.05■□□□□ 0.32
CTSA-206ENST00000480961 DUSP21Q9H596 190 aa17.05■□□□□ 0.32
CTSA-206ENST00000480961 TRIM36Q9NQ86 728 aa17.05■□□□□ 0.32
CTSA-206ENST00000480961 NF1P21359 2839 aa17.05■□□□□ 0.32
CTSA-206ENST00000480961 SETD2Q9BYW2 2564 aaPredicted RBP17.04■□□□□ 0.32
CTSA-206ENST00000480961 PQLC2LA1A4F0 135 aa17.04■□□□□ 0.32
CTSA-206ENST00000480961 OR5B21A6NL26 309 aa17.04■□□□□ 0.32
CTSA-206ENST00000480961 CEACAM18A8MTB9 384 aa17.04■□□□□ 0.32
CTSA-206ENST00000480961 LGALS8O00214 317 aa17.04■□□□□ 0.32
CTSA-206ENST00000480961 AKR7A2O43488 359 aa17.04■□□□□ 0.32
CTSA-206ENST00000480961 SERPINA3P01011 423 aa17.04■□□□□ 0.32
CTSA-206ENST00000480961 WNT4P56705 351 aa17.04■□□□□ 0.32
CTSA-206ENST00000480961 SEC61A1P61619 476 aaKnown RBP17.04■□□□□ 0.32
CTSA-206ENST00000480961 ZNF404Q494X3 552 aa17.04■□□□□ 0.32
CTSA-206ENST00000480961 TMEM155Q4W5P6 130 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms