RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 BAP18Q8IXM2 172 aa8.62□□□□□ -1.03
VEGFA-212ENST00000480614 NECAP1Q8NC96 275 aa8.62□□□□□ -1.03
VEGFA-212ENST00000480614 OR4C5Q8NGB2 326 aa8.62□□□□□ -1.03
VEGFA-212ENST00000480614 OR2G2Q8NGZ5 317 aa8.62□□□□□ -1.03
VEGFA-212ENST00000480614 OIT3Q8WWZ8 545 aa8.62□□□□□ -1.03
VEGFA-212ENST00000480614 SLC45A2Q9UMX9 530 aa8.62□□□□□ -1.03
VEGFA-212ENST00000480614 TMED3Q9Y3Q3 217 aa8.62□□□□□ -1.03
VEGFA-212ENST00000480614 TRPM3Q9HCF6 1732 aaPredicted RBP8.62□□□□□ -1.03
VEGFA-212ENST00000480614 RHOBP62745 196 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 FUT7Q11130 342 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 ZNF574Q6ZN55 896 aaPredicted RBP8.61□□□□□ -1.03
VEGFA-212ENST00000480614 EIF4E3Q8N5X7 224 aaKnown RBP8.61□□□□□ -1.03
VEGFA-212ENST00000480614 KIAA1958Q8N8K9 716 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 RTN4IP1Q8WWV3 396 aaPredicted RBP8.61□□□□□ -1.03
VEGFA-212ENST00000480614 VAMP8Q9BV40 100 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 SLC25A4P12235 298 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 HAAOP46952 286 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 RHOUQ7L0Q8 258 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 OR2V1Q8NHB1 315 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 GAL3ST2Q9H3Q3 398 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 PTPRDP23468 1912 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 IGHV3-9P01782 118 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 ATF1P18846 271 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 SULT1A2P50226 295 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 MMP15P51511 669 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 GPM6AP51674 278 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 CA13Q8N1Q1 262 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 CLDN23Q96B33 292 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 OR51B4Q9Y5P0 310 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 CCDC187A0A096LP49 1063 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 PCBP4P57723 403 aaKnown RBP8.61□□□□□ -1.03
VEGFA-212ENST00000480614 TRA2AQ13595 282 aaKnown RBP eCLIP8.61□□□□□ -1.032e-8■□□□□ 9.9
VEGFA-212ENST00000480614 DOLPP1Q86YN1 238 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 C11orf42Q8N5U0 333 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 TMEM229BQ8NBD8 167 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 LINC01553A4QN01 128 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 TMEM99Q8N816 258 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 EMC6Q9BV81 110 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 NRG2O14511 850 aaPredicted RBP8.61□□□□□ -1.03
VEGFA-212ENST00000480614 GNG4P50150 75 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 PRRX1P54821 245 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 QSER1Q2KHR3 1735 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 A0A096LPE4 126 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 A0A1W2PPZ6 126 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 G0S2P27469 103 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 POLR2IP36954 125 aaKnown RBP8.61□□□□□ -1.03
VEGFA-212ENST00000480614 FITM1A5D6W6 292 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 NDUFB3O43676 98 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 ZBTB25P24278 435 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 ISL1P61371 349 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 MOB3BQ86TA1 216 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 OR5M1Q8NGP8 315 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 OR1L1Q8NH94 360 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 POMT2Q9UKY4 750 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 SHISA7A6NL88 538 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 TNFSF11O14788 317 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 ROBO4Q8WZ75 1007 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 AKIP1Q9NQ31 210 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 PPT2Q9UMR5 302 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 OPRM1P35372 400 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 SPCS3P61009 180 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 TMEM128Q5BJH2 165 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 RBM45Q8IUH3 476 aaKnown RBP8.61□□□□□ -1.03
VEGFA-212ENST00000480614 SPEM1Q8N4L4 309 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 OR2M3Q8NG83 312 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 OR4C16Q8NGL9 310 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 KCNK15Q9H427 330 aa8.61□□□□□ -1.03
VEGFA-212ENST00000480614 A0A1W2PPQ1 181 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 ACVR1Q04771 509 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 COX19Q49B96 90 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 NPEPL1Q8NDH3 523 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 DEFB127Q9H1M4 99 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 SPNS1Q9H2V7 528 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 KLKB1P03952 638 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 CLEC2LP0C7M8 214 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 TMEM211Q6ICI0 200 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 ZNF680Q8NEM1 530 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 SLC2A9Q9NRM0 540 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 IL20Q9NYY1 176 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 CHST2Q9Y4C5 530 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 M0R143 59 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 GP1BAP07359 652 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 EMP3P54852 163 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 HOXA4Q00056 320 aaPredicted RBP8.6□□□□□ -1.03
VEGFA-212ENST00000480614 OR2T2Q6IF00 324 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 RXFP4Q8TDU9 374 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 ZNF17P17021 662 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 SMIM6P0DI80 62 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 HERVK_113P61574 105 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 GNG3P63215 75 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 PAX5Q02548 391 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 BTLAQ7Z6A9 289 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 TAAR9Q96RI9 348 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 MMP26Q9NRE1 261 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 K7EQS6 105 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 TMEM183BQ1AE95 376 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 FUNDC1Q8IVP5 155 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 SLC26A10Q8NG04 563 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.6□□□□□ -1.03
VEGFA-212ENST00000480614 SP1P08047 785 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms