RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 ELMOD2Q8IZ81 293 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 SYS1Q8N2H4 156 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 RFLNBQ8N5W9 214 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 ZBTB34Q8NCN2 500 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 OR5A2Q8NGI9 324 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 OR9Q1Q8NGQ5 310 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 OR51F2Q8NH61 342 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 SPRYD4Q8WW59 207 aaPredicted RBP4.11□□□□□ -1.75
PTCD3-213ENST00000480102 LRTOMTQ8WZ04 291 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 SGK3Q96BR1 496 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 MSI2Q96DH6 328 aaKnown RBP4.11□□□□□ -1.75
PTCD3-213ENST00000480102 OR2V2Q96R30 315 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 OR51V1Q9H2C8 321 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 ZNF665Q9H7R5 613 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 FN3KRPQ9HA64 309 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 PATZ1Q9HBE1 687 aaKnown RBP4.11□□□□□ -1.75
PTCD3-213ENST00000480102 ADGRL4Q9HBW9 690 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 G6PC2Q9NQR9 355 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 FAM206AQ9NX38 181 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 TVP23BQ9NYZ1 205 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 MIOXQ9UGB7 285 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 LAMP5Q9UJQ1 280 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 PPP1R3CQ9UQK1 317 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 EXOGQ9Y2C4 368 aaKnown RBP4.11□□□□□ -1.75
PTCD3-213ENST00000480102 WIPI2Q9Y4P8 454 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 ATRQ13535 2644 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 TLN2Q9Y4G6 2542 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 A0A0G2JMP0 313 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 A0A0X1KG70 313 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 ZNF816-ZNF321PA0A0X1KG74 233 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 LOC100130705A0A1B0GUX0 176 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 IRGMA1A4Y4 181 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 OR5B21A6NL26 309 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 FAM183AA6NL82 134 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 ANKRD30BLA7E2S9 258 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 H0YAE9 185 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 MLNRO43193 412 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 DHRS3O75911 302 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 GYPBP06028 91 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 WNT2P09544 360 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 H2BFMP0C1H6 154 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 CLUP10909 449 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 COL8A2P25067 703 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 MPZP25189 248 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 POU1F1P28069 291 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 HSD11B1P28845 292 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 EPHA2P29317 976 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 PSMB10P40306 273 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 MTNR1AP48039 350 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 SLC6A9P48067 706 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 CX3CR1P49238 355 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 RIDAP52758 137 aaKnown RBP4.1□□□□□ -1.75
PTCD3-213ENST00000480102 ZNF121P58317 390 aaPredicted RBP4.1□□□□□ -1.75
PTCD3-213ENST00000480102 CXCR4P61073 352 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 ACTA2P62736 377 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 ACTG2P63267 376 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 CSNK2BP67870 215 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 PAX2Q02962 417 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 ZNF92Q03936 586 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 MAB21L1Q13394 359 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 APOFQ13790 326 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 EIF2B1Q14232 305 aaKnown RBP4.1□□□□□ -1.75
PTCD3-213ENST00000480102 TAF13Q15543 124 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 SNAI3Q3KNW1 292 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 CEACAM21Q3KPI0 293 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 ZNF404Q494X3 552 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 CDONQ4KMG0 1287 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 CCDC58Q4VC31 144 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 GLYATL3Q5SZD4 288 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 RNLSQ5VYX0 342 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 TTC23Q5W5X9 447 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 OR2T2Q6IF00 324 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 ZNF322Q6U7Q0 402 aaPredicted RBP4.1□□□□□ -1.75
PTCD3-213ENST00000480102 ZBTB49Q6ZSB9 765 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 C1orf122Q6ZSJ8 110 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 OVCH2Q7RTZ1 564 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.1□□□□□ -1.75
PTCD3-213ENST00000480102 ZCCHC24Q8N2G6 241 aaKnown RBP4.1□□□□□ -1.75
PTCD3-213ENST00000480102 IQCF1Q8N6M8 205 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 DNAAF1Q8NEP3 725 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 OR4M2Q8NGB6 313 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 OR11L1Q8NGX0 322 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 OR6N2Q8NGY6 317 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 CLDND2Q8NHS1 167 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 CCL17Q92583 94 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 HTRA1Q92743 480 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 TMEM186Q96B77 213 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 ZMYND19Q96E35 227 aaPredicted RBP4.1□□□□□ -1.75
PTCD3-213ENST00000480102 REEP6Q96HR9 211 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 PKP2Q99959 881 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 PRDM13Q9H4Q3 707 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 RERGLQ9H628 205 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 DCLRE1BQ9H816 532 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 UNKLQ9H9P5 680 aaKnown RBP4.1□□□□□ -1.75
PTCD3-213ENST00000480102 RASL12Q9NYN1 266 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 RNF7Q9UBF6 113 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 PPIAL4AQ9Y536 164 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 LRP12Q9Y561 859 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 SNX5Q9Y5X3 404 aa4.1□□□□□ -1.75
PTCD3-213ENST00000480102 R4GMQ9 66 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms