RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 ELAVL1Q15717 326 aaKnown RBP8.1□□□□□ -1.11
TTC3-216ENST00000479930 MBOAT2Q6ZWT7 520 aa8.1□□□□□ -1.11
TTC3-216ENST00000479930 DOK1Q99704 481 aa8.1□□□□□ -1.11
TTC3-216ENST00000479930 GEMIN7Q9H840 131 aaKnown RBP8.1□□□□□ -1.11
TTC3-216ENST00000479930 IGKV3D-20A0A0C4DH25 116 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 PDGFAP04085 211 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 SHBGP04278 402 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 PPOXP50336 477 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 SLC10A6Q3KNW5 377 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 ZNF322Q6U7Q0 402 aaPredicted RBP8.09□□□□□ -1.11
TTC3-216ENST00000479930 DUSP18Q8NEJ0 188 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 MARCH1Q8TCQ1 289 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 SFT2D1Q8WV19 159 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 DDOQ99489 341 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 VAMP8Q9BV40 100 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 PCED1AQ9H1Q7 454 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 C12orf10Q9HB07 376 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 PSENENQ9NZ42 101 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 ZNF609O15014 1411 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 RTP2Q5QGT7 225 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 LYG2Q86SG7 212 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 AMIGO3Q86WK7 504 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 PEBP4Q96S96 227 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 SSSCA1O60232 199 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 SOD3P08294 240 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 CDC20Q12834 499 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 LY6DQ14210 128 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 FAM89BQ8N5H3 189 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 ARHGDIGQ99819 225 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 SMOC2Q9H3U7 446 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 TET1Q8NFU7 2136 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 NDUFS5O43920 106 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 ACTL6AO96019 429 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 JAM2P57087 298 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 TRA2BP62995 288 aaKnown RBP8.09□□□□□ -1.11
TTC3-216ENST00000479930 SRPXP78539 464 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.09□□□□□ -1.11
TTC3-216ENST00000479930 FAHD1Q6P587 224 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 TAMM41Q96BW9 452 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 C4orf36Q96KX1 117 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 MS4A5Q9H3V2 200 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 SLA2Q9H6Q3 261 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 KLK4Q9Y5K2 254 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 CHRM2P08172 466 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 TNFRSF1BP20333 461 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 COL9A1P20849 921 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 EIF3IQ13347 325 aaKnown RBP8.09□□□□□ -1.11
TTC3-216ENST00000479930 PCOLCEQ15113 449 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 TMEM236Q5W0B7 351 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 WDR74Q6RFH5 385 aaPredicted RBP8.09□□□□□ -1.11
TTC3-216ENST00000479930 MRGPRGQ86SM5 289 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 ZNF561Q8N587 486 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 C10orf82Q8WW14 230 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 SPOCK2Q92563 424 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 NPAS1Q99742 590 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 GPR61Q9BZJ8 451 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 LRRC7Q96NW7 1537 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 PLIN4Q96Q06 1357 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 HYAL3O43820 417 aaPredicted RBP8.09□□□□□ -1.11
TTC3-216ENST00000479930 HLA-AP01891 365 aaKnown RBP8.09□□□□□ -1.11
TTC3-216ENST00000479930 ADRA2AP08913 450 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 CPMP14384 443 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 LIMK1P53667 647 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 SSX1Q16384 188 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 ATP6V1FQ16864 119 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 STPG1Q5TH74 334 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 ASCL5Q7RTU5 278 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 MDS2Q8NDY4 140 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 DEDD2Q8WXF8 326 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 ALKBH7Q9BT30 221 aaPredicted RBP8.09□□□□□ -1.11
TTC3-216ENST00000479930 S100A14Q9HCY8 104 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 MIOXQ9UGB7 285 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 LSM2Q9Y333 95 aaKnown RBP8.09□□□□□ -1.11
TTC3-216ENST00000479930 TJP1Q07157 1748 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 MADDQ8WXG6 1647 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 ZNF840PA6NDX5 716 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 FAM182AQ5T1J6 154 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 HAPLN4Q86UW8 402 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 OR7D2Q96RA2 312 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 OR51J1Q9H342 316 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 ZNF586Q9NXT0 402 aa8.09□□□□□ -1.11
TTC3-216ENST00000479930 M6PRP20645 277 aa8.08□□□□□ -1.12
TTC3-216ENST00000479930 FAM110DQ8TAY7 271 aaPredicted RBP8.08□□□□□ -1.12
TTC3-216ENST00000479930 VAMP5O95183 116 aa8.08□□□□□ -1.12
TTC3-216ENST00000479930 CD8AP01732 235 aa8.08□□□□□ -1.12
TTC3-216ENST00000479930 METAP1P53582 386 aa8.08□□□□□ -1.12
TTC3-216ENST00000479930 C3AR1Q16581 482 aa8.08□□□□□ -1.12
TTC3-216ENST00000479930 DYNC2LI1Q8TCX1 351 aa8.08□□□□□ -1.12
TTC3-216ENST00000479930 C1GALT1Q9NS00 363 aa8.08□□□□□ -1.12
TTC3-216ENST00000479930 DNAJC25-GNG10A0A024R161 153 aa8.08□□□□□ -1.12
TTC3-216ENST00000479930 ZNF133P52736 654 aaPredicted RBP8.08□□□□□ -1.12
TTC3-216ENST00000479930 LCN15Q6UWW0 184 aa8.08□□□□□ -1.12
TTC3-216ENST00000479930 ADGRA1Q86SQ6 560 aa8.08□□□□□ -1.12
TTC3-216ENST00000479930 ZNF429Q86V71 674 aa8.08□□□□□ -1.12
TTC3-216ENST00000479930 FEVQ99581 238 aa8.08□□□□□ -1.12
TTC3-216ENST00000479930 FABP4P15090 132 aa8.08□□□□□ -1.12
TTC3-216ENST00000479930 VDAC2P45880 294 aaPredicted RBP8.08□□□□□ -1.12
TTC3-216ENST00000479930 ERMP1Q7Z2K6 904 aa8.08□□□□□ -1.12
TTC3-216ENST00000479930 FNDC8Q8TC99 324 aa8.08□□□□□ -1.12
TTC3-216ENST00000479930 EDARADDQ8WWZ3 215 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms