RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 BEAN1Q3B7T3 259 aa13.04□□□□□ -0.32
HDLBP-238ENST00000479894 ALKBH6Q3KRA9 238 aa13.04□□□□□ -0.32
HDLBP-238ENST00000479894 KPRPQ5T749 579 aaPredicted RBP13.04□□□□□ -0.32
HDLBP-238ENST00000479894 LAIR2Q6ISS4 152 aa13.04□□□□□ -0.32
HDLBP-238ENST00000479894 FDX2Q6P4F2 183 aa13.04□□□□□ -0.32
HDLBP-238ENST00000479894 FAM57BQ71RH2 274 aa13.04□□□□□ -0.32
HDLBP-238ENST00000479894 PGAP1Q75T13 922 aa13.04□□□□□ -0.32
HDLBP-238ENST00000479894 PRSS48Q7RTY5 328 aa13.04□□□□□ -0.32
HDLBP-238ENST00000479894 ZNF101Q8IZC7 436 aa13.04□□□□□ -0.32
HDLBP-238ENST00000479894 SVOPQ8N4V2 548 aa13.04□□□□□ -0.32
HDLBP-238ENST00000479894 KLF14Q8TD94 323 aaPredicted RBP13.04□□□□□ -0.32
HDLBP-238ENST00000479894 HAVCR1Q96D42 359 aa13.04□□□□□ -0.32
HDLBP-238ENST00000479894 MARS2Q96GW9 593 aaKnown RBP13.04□□□□□ -0.32
HDLBP-238ENST00000479894 SLC22A4Q9H015 551 aa13.04□□□□□ -0.32
HDLBP-238ENST00000479894 PRDM13Q9H4Q3 707 aa13.04□□□□□ -0.32
HDLBP-238ENST00000479894 SAP30LQ9HAJ7 183 aa13.04□□□□□ -0.32
HDLBP-238ENST00000479894 TRIM36Q9NQ86 728 aa13.04□□□□□ -0.32
HDLBP-238ENST00000479894 BABAM2Q9NXR7 383 aa13.04□□□□□ -0.32
HDLBP-238ENST00000479894 NUFIP1Q9UHK0 495 aaKnown RBP13.04□□□□□ -0.32
HDLBP-238ENST00000479894 STARD10Q9Y365 291 aa13.04□□□□□ -0.32
HDLBP-238ENST00000479894 C3orf80F5H4A9 247 aa13.03□□□□□ -0.32
HDLBP-238ENST00000479894 TPD52L2O43399 206 aaKnown RBP13.03□□□□□ -0.32
HDLBP-238ENST00000479894 RPP14O95059 124 aaKnown RBP13.03□□□□□ -0.32
HDLBP-238ENST00000479894 TNFAIP8O95379 198 aa13.03□□□□□ -0.32
HDLBP-238ENST00000479894 IGHV3-13P01766 116 aa13.03□□□□□ -0.32
HDLBP-238ENST00000479894 UBCP0CG48 685 aaKnown RBP13.03□□□□□ -0.32
HDLBP-238ENST00000479894 TGM4P49221 684 aa13.03□□□□□ -0.32
HDLBP-238ENST00000479894 PDCD1Q15116 288 aa13.03□□□□□ -0.32
HDLBP-238ENST00000479894 TP53I3Q53FA7 332 aa13.03□□□□□ -0.32
HDLBP-238ENST00000479894 RFPL4BQ6ZWI9 263 aa13.03□□□□□ -0.32
HDLBP-238ENST00000479894 SLC25A40Q8TBP6 338 aa13.03□□□□□ -0.32
HDLBP-238ENST00000479894 C4orf36Q96KX1 117 aa13.03□□□□□ -0.32
HDLBP-238ENST00000479894 DIRC2Q96SL1 478 aa13.03□□□□□ -0.32
HDLBP-238ENST00000479894 OR2J1Q9GZK6 312 aa13.03□□□□□ -0.32
HDLBP-238ENST00000479894 CCDC90BQ9GZT6 254 aa13.03□□□□□ -0.32
HDLBP-238ENST00000479894 PBOV1Q9GZY1 135 aa13.03□□□□□ -0.32
HDLBP-238ENST00000479894 OR51B6Q9H340 312 aa13.03□□□□□ -0.32
HDLBP-238ENST00000479894 BRD7Q9NPI1 651 aa13.03□□□□□ -0.32
HDLBP-238ENST00000479894 UBAP1Q9NZ09 502 aa13.03□□□□□ -0.32
HDLBP-238ENST00000479894 OR52A1Q9UKL2 312 aa13.03□□□□□ -0.32
HDLBP-238ENST00000479894 GTF2A1LQ9UNN4 478 aa13.03□□□□□ -0.32
HDLBP-238ENST00000479894 N6AMT1Q9Y5N5 214 aa13.03□□□□□ -0.32
HDLBP-238ENST00000479894 PSMD9O00233 223 aa13.02□□□□□ -0.33
HDLBP-238ENST00000479894 TIMM8AO60220 97 aaPredicted RBP13.02□□□□□ -0.33
HDLBP-238ENST00000479894 CLPXO76031 633 aa13.02□□□□□ -0.33
HDLBP-238ENST00000479894 CLPTM1O96005 669 aa13.02□□□□□ -0.33
HDLBP-238ENST00000479894 KITLGP21583 273 aa13.02□□□□□ -0.33
HDLBP-238ENST00000479894 ETV1P50549 477 aa13.02□□□□□ -0.33
HDLBP-238ENST00000479894 WNT4P56705 351 aa13.02□□□□□ -0.33
HDLBP-238ENST00000479894 OR12D2P58182 307 aa13.02□□□□□ -0.33
HDLBP-238ENST00000479894 KRTAP10-3P60369 221 aa13.02□□□□□ -0.33
HDLBP-238ENST00000479894 RPL15P61313 204 aaKnown RBP13.02□□□□□ -0.33
HDLBP-238ENST00000479894 BDH1Q02338 343 aa13.02□□□□□ -0.33
HDLBP-238ENST00000479894 MZT1Q08AG7 82 aa13.02□□□□□ -0.33
HDLBP-238ENST00000479894 KCTD21Q4G0X4 260 aa13.02□□□□□ -0.33
HDLBP-238ENST00000479894 TMEM244Q5VVB8 128 aa13.02□□□□□ -0.33
HDLBP-238ENST00000479894 RPL22L1Q6P5R6 122 aaKnown RBP13.02□□□□□ -0.33
HDLBP-238ENST00000479894 SSX6Q7RTT6 188 aa13.02□□□□□ -0.33
HDLBP-238ENST00000479894 PRSS45Q7RTY3 260 aa13.02□□□□□ -0.33
HDLBP-238ENST00000479894 COMMD2Q86X83 199 aa13.02□□□□□ -0.33
HDLBP-238ENST00000479894 ELMOD2Q8IZ81 293 aa13.02□□□□□ -0.33
HDLBP-238ENST00000479894 CSNK2A3Q8NEV1 391 aa13.02□□□□□ -0.33
HDLBP-238ENST00000479894 SPRYD4Q8WW59 207 aaPredicted RBP13.02□□□□□ -0.33
HDLBP-238ENST00000479894 SPSB4Q96A44 273 aa13.02□□□□□ -0.33
HDLBP-238ENST00000479894 CMBLQ96DG6 245 aa13.02□□□□□ -0.33
HDLBP-238ENST00000479894 SIGLEC11Q96RL6 698 aa13.02□□□□□ -0.33
HDLBP-238ENST00000479894 COMMD4Q9H0A8 199 aa13.02□□□□□ -0.33
HDLBP-238ENST00000479894 ABCB9Q9NP78 766 aa13.02□□□□□ -0.33
HDLBP-238ENST00000479894 FAM206AQ9NX38 181 aa13.02□□□□□ -0.33
HDLBP-238ENST00000479894 C1RLQ9NZP8 487 aa13.02□□□□□ -0.33
HDLBP-238ENST00000479894 CACNG2Q9Y698 323 aa13.02□□□□□ -0.33
HDLBP-238ENST00000479894 TET2Q6N021 2002 aaPredicted RBP13.01□□□□□ -0.33
HDLBP-238ENST00000479894 ISPDA4D126 451 aa13.01□□□□□ -0.33
HDLBP-238ENST00000479894 GGT3PA6NGU5 568 aa13.01□□□□□ -0.33
HDLBP-238ENST00000479894 TMEM212A6NML5 194 aa13.01□□□□□ -0.33
HDLBP-238ENST00000479894 DHRS7CA6NNS2 312 aa13.01□□□□□ -0.33
HDLBP-238ENST00000479894 A8MXK9 166 aa13.01□□□□□ -0.33
HDLBP-238ENST00000479894 SRRM5B3KS81 715 aa13.01□□□□□ -0.33
HDLBP-238ENST00000479894 TRAPPC2LH3BP13 241 aa13.01□□□□□ -0.33
HDLBP-238ENST00000479894 HOXA3O43365 443 aaPredicted RBP13.01□□□□□ -0.33
HDLBP-238ENST00000479894 TSPAN15O95858 294 aa13.01□□□□□ -0.33
HDLBP-238ENST00000479894 PLATP00750 562 aa13.01□□□□□ -0.33
HDLBP-238ENST00000479894 SLC2A1P11166 492 aa13.01□□□□□ -0.33
HDLBP-238ENST00000479894 C21orf33P30042 268 aaPredicted RBP13.01□□□□□ -0.33
HDLBP-238ENST00000479894 MAP2K3P46734 347 aa13.01□□□□□ -0.33
HDLBP-238ENST00000479894 RELBQ01201 579 aa13.01□□□□□ -0.33
HDLBP-238ENST00000479894 GK2Q14410 553 aaPredicted RBP13.01□□□□□ -0.33
HDLBP-238ENST00000479894 CATSPERDQ86XM0 798 aa13.01□□□□□ -0.33
HDLBP-238ENST00000479894 KLBQ86Z14 1044 aa13.01□□□□□ -0.33
HDLBP-238ENST00000479894 NANOGP1Q8N7R0 232 aa13.01□□□□□ -0.33
HDLBP-238ENST00000479894 CCL17Q92583 94 aa13.01□□□□□ -0.33
HDLBP-238ENST00000479894 FCGR1BQ92637 280 aa13.01□□□□□ -0.33
HDLBP-238ENST00000479894 THRSPQ92748 146 aa13.01□□□□□ -0.33
HDLBP-238ENST00000479894 RORBQ92753 470 aa13.01□□□□□ -0.33
HDLBP-238ENST00000479894 PELI1Q96FA3 418 aa13.01□□□□□ -0.33
HDLBP-238ENST00000479894 REEP6Q96HR9 211 aa13.01□□□□□ -0.33
HDLBP-238ENST00000479894 NR1H4Q96RI1 486 aaPredicted RBP13.01□□□□□ -0.33
HDLBP-238ENST00000479894 SLC30A2Q9BRI3 323 aa13.01□□□□□ -0.33
HDLBP-238ENST00000479894 TTTY10Q9BZA0 68 aa13.01□□□□□ -0.33
HDLBP-238ENST00000479894 VCX3AQ9NNX9 186 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms