RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 IRF3Q14653 427 aa11.93□□□□□ -0.5
ATG4B-218ENST00000479554 OR8B8Q15620 311 aa11.93□□□□□ -0.5
ATG4B-218ENST00000479554 TIGD6Q17RP2 521 aa11.93□□□□□ -0.5
ATG4B-218ENST00000479554 SYT6Q5T7P8 510 aaPredicted RBP11.93□□□□□ -0.5
ATG4B-218ENST00000479554 LINC01590Q5TEZ4 76 aa11.93□□□□□ -0.5
ATG4B-218ENST00000479554 AADACL4Q5VUY2 407 aa11.93□□□□□ -0.5
ATG4B-218ENST00000479554 UBE2UQ5VVX9 321 aa11.93□□□□□ -0.5
ATG4B-218ENST00000479554 RNLSQ5VYX0 342 aa11.93□□□□□ -0.5
ATG4B-218ENST00000479554 NXNL2Q5VZ03 156 aa11.93□□□□□ -0.5
ATG4B-218ENST00000479554 SFRP4Q6FHJ7 346 aaPredicted RBP11.93□□□□□ -0.5
ATG4B-218ENST00000479554 ZNF841Q6ZN19 808 aa11.93□□□□□ -0.5
ATG4B-218ENST00000479554 CLVS1Q8IUQ0 354 aaPredicted RBP11.93□□□□□ -0.5
ATG4B-218ENST00000479554 ERI1Q8IV48 349 aaKnown RBP11.93□□□□□ -0.5
ATG4B-218ENST00000479554 OR6N2Q8NGY6 317 aa11.93□□□□□ -0.5
ATG4B-218ENST00000479554 SGMS2Q8NHU3 365 aa11.93□□□□□ -0.5
ATG4B-218ENST00000479554 SPSB4Q96A44 273 aa11.93□□□□□ -0.5
ATG4B-218ENST00000479554 SLC25A28Q96A46 364 aa11.93□□□□□ -0.5
ATG4B-218ENST00000479554 OTULINQ96BN8 352 aa11.93□□□□□ -0.5
ATG4B-218ENST00000479554 TMEM80Q96HE8 168 aa11.93□□□□□ -0.5
ATG4B-218ENST00000479554 SP140LQ9H930 580 aa11.93□□□□□ -0.5
ATG4B-218ENST00000479554 MED20Q9H944 212 aa11.93□□□□□ -0.5
ATG4B-218ENST00000479554 MRPS18AQ9NVS2 196 aaKnown RBP11.93□□□□□ -0.5
ATG4B-218ENST00000479554 C14orf119Q9NWQ9 140 aa11.93□□□□□ -0.5
ATG4B-218ENST00000479554 C1orf123Q9NWV4 160 aa11.93□□□□□ -0.5
ATG4B-218ENST00000479554 H2AFY2Q9P0M6 372 aaPredicted RBP11.93□□□□□ -0.5
ATG4B-218ENST00000479554 TRAV38-1A0A0B4J264 116 aa11.92□□□□□ -0.5
ATG4B-218ENST00000479554 OOEPA6NGQ2 149 aa11.92□□□□□ -0.5
ATG4B-218ENST00000479554 FAM183AA6NL82 134 aa11.92□□□□□ -0.5
ATG4B-218ENST00000479554 C22orf46C9J442 243 aa11.92□□□□□ -0.5
ATG4B-218ENST00000479554 ADAM20O43506 726 aa11.92□□□□□ -0.5
ATG4B-218ENST00000479554 INMTO95050 263 aa11.92□□□□□ -0.5
ATG4B-218ENST00000479554 RNASE1P07998 156 aaKnown RBP11.92□□□□□ -0.5
ATG4B-218ENST00000479554 PAICSP22234 425 aaKnown RBP11.92□□□□□ -0.5
ATG4B-218ENST00000479554 C21orf33P30042 268 aaPredicted RBP11.92□□□□□ -0.5
ATG4B-218ENST00000479554 GSTT1P30711 240 aa11.92□□□□□ -0.5
ATG4B-218ENST00000479554 DDOSTP39656 456 aa11.92□□□□□ -0.5
ATG4B-218ENST00000479554 FGF12P61328 243 aa11.92□□□□□ -0.5
ATG4B-218ENST00000479554 RAB40BQ12829 278 aa11.92□□□□□ -0.5
ATG4B-218ENST00000479554 TMED1Q13445 227 aa11.92□□□□□ -0.5
ATG4B-218ENST00000479554 CNPY1Q3B7I2 92 aa11.92□□□□□ -0.5
ATG4B-218ENST00000479554 CD276Q5ZPR3 534 aa11.92□□□□□ -0.5
ATG4B-218ENST00000479554 SLC16A9Q7RTY1 509 aa11.92□□□□□ -0.5
ATG4B-218ENST00000479554 DPY19L4Q7Z388 723 aa11.92□□□□□ -0.5
ATG4B-218ENST00000479554 BCDIN3DQ7Z5W3 292 aaKnown RBP11.92□□□□□ -0.5
ATG4B-218ENST00000479554 OR8S1Q8NH09 359 aa11.92□□□□□ -0.5
ATG4B-218ENST00000479554 CTSZQ9UBR2 303 aa11.92□□□□□ -0.5
ATG4B-218ENST00000479554 RSL24D1Q9UHA3 163 aaKnown RBP11.92□□□□□ -0.5
ATG4B-218ENST00000479554 CLDN34H7C241 214 aa11.91□□□□□ -0.5
ATG4B-218ENST00000479554 SPRY1O43609 319 aaPredicted RBP11.91□□□□□ -0.5
ATG4B-218ENST00000479554 NDUFA2O43678 99 aa11.91□□□□□ -0.5
ATG4B-218ENST00000479554 NOL3O60936 208 aaKnown RBP11.91□□□□□ -0.5
ATG4B-218ENST00000479554 GLCEO94923 617 aa11.91□□□□□ -0.5
ATG4B-218ENST00000479554 APOC1P02654 83 aa11.91□□□□□ -0.5
ATG4B-218ENST00000479554 CFL1P23528 166 aaKnown RBP11.91□□□□□ -0.5
ATG4B-218ENST00000479554 DCKP27707 260 aa11.91□□□□□ -0.5
ATG4B-218ENST00000479554 HTR1FP30939 366 aa11.91□□□□□ -0.5
ATG4B-218ENST00000479554 GP2P55259 537 aaKnown RBP11.91□□□□□ -0.5
ATG4B-218ENST00000479554 FAM3AP98173 230 aa11.91□□□□□ -0.5
ATG4B-218ENST00000479554 SLC9A3R2Q15599 337 aa11.91□□□□□ -0.5
ATG4B-218ENST00000479554 GFOD2Q3B7J2 385 aa11.91□□□□□ -0.5
ATG4B-218ENST00000479554 GPR157Q5UAW9 335 aa11.91□□□□□ -0.5
ATG4B-218ENST00000479554 BRD3OSQ6XYD6 125 aa11.91□□□□□ -0.5
ATG4B-218ENST00000479554 ZNF826PQ6ZT77 177 aa11.91□□□□□ -0.5
ATG4B-218ENST00000479554 SHFQ7M4L6 423 aa11.91□□□□□ -0.5
ATG4B-218ENST00000479554 CPOQ8IVL8 374 aa11.91□□□□□ -0.5
ATG4B-218ENST00000479554 GCSAMQ8N6F7 178 aa11.91□□□□□ -0.5
ATG4B-218ENST00000479554 RNF133Q8WVZ7 376 aa11.91□□□□□ -0.5
ATG4B-218ENST00000479554 RNFT2Q96EX2 444 aa11.91□□□□□ -0.5
ATG4B-218ENST00000479554 REEP6Q96HR9 211 aa11.91□□□□□ -0.5
ATG4B-218ENST00000479554 PCGF1Q9BSM1 259 aa11.91□□□□□ -0.5
ATG4B-218ENST00000479554 ABHD6Q9BV23 337 aa11.91□□□□□ -0.5
ATG4B-218ENST00000479554 OR51V1Q9H2C8 321 aa11.91□□□□□ -0.5
ATG4B-218ENST00000479554 FGF20Q9NP95 211 aaPredicted RBP11.91□□□□□ -0.5
ATG4B-218ENST00000479554 WARS2Q9UGM6 360 aaKnown RBP11.91□□□□□ -0.5
ATG4B-218ENST00000479554 DIMT1Q9UNQ2 313 aaKnown RBP11.91□□□□□ -0.5
ATG4B-218ENST00000479554 SOX21Q9Y651 276 aaPredicted RBP11.91□□□□□ -0.5
ATG4B-218ENST00000479554 MDFIC2A0A1B0GVS7 189 aa11.9□□□□□ -0.5
ATG4B-218ENST00000479554 PRR23D1E9PI22 279 aaPredicted RBP11.9□□□□□ -0.5
ATG4B-218ENST00000479554 GYPAP02724 150 aa11.9□□□□□ -0.5
ATG4B-218ENST00000479554 H2BFMP0C1H6 154 aa11.9□□□□□ -0.5
ATG4B-218ENST00000479554 PRR23D2P0DMB1 279 aaPredicted RBP11.9□□□□□ -0.5
ATG4B-218ENST00000479554 EGR1P18146 543 aa11.9□□□□□ -0.5
ATG4B-218ENST00000479554 PSMB9P28065 219 aa11.9□□□□□ -0.5
ATG4B-218ENST00000479554 TMBIM6P55061 237 aa11.9□□□□□ -0.5
ATG4B-218ENST00000479554 ZNF121P58317 390 aaPredicted RBP11.9□□□□□ -0.5
ATG4B-218ENST00000479554 GPR107Q5VW38 600 aa11.9□□□□□ -0.5
ATG4B-218ENST00000479554 PLBD1Q6P4A8 553 aa11.9□□□□□ -0.5
ATG4B-218ENST00000479554 FAM57BQ71RH2 274 aa11.9□□□□□ -0.5
ATG4B-218ENST00000479554 ZNF367Q7RTV3 350 aa11.9□□□□□ -0.5
ATG4B-218ENST00000479554 TIGD4Q8IY51 512 aa11.9□□□□□ -0.5
ATG4B-218ENST00000479554 OR52H1Q8NGJ2 320 aa11.9□□□□□ -0.5
ATG4B-218ENST00000479554 OR52I1Q8NGK6 324 aa11.9□□□□□ -0.5
ATG4B-218ENST00000479554 LGALS12Q96DT0 336 aa11.9□□□□□ -0.5
ATG4B-218ENST00000479554 AMELYQ99218 206 aa11.9□□□□□ -0.5
ATG4B-218ENST00000479554 ZNF747Q9BV97 191 aa11.9□□□□□ -0.5
ATG4B-218ENST00000479554 OR10A2Q9H208 303 aa11.9□□□□□ -0.5
ATG4B-218ENST00000479554 MARCH7Q9H992 704 aa11.9□□□□□ -0.5
ATG4B-218ENST00000479554 SMURF1Q9HCE7 757 aa11.9□□□□□ -0.5
ATG4B-218ENST00000479554 BRD7Q9NPI1 651 aa11.9□□□□□ -0.5
ATG4B-218ENST00000479554 ERGIC3Q9Y282 383 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms