RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 OR51B5Q9H339 312 aa2.6□□□□□ -1.99
CCDC58-204ENST00000479414 SND1-IT1Q9HBX3 110 aa2.6□□□□□ -1.99
CCDC58-204ENST00000479414 LOC102724200A0A096LPH7 203 aaPredicted RBP2.59□□□□□ -1.99
CCDC58-204ENST00000479414 IGHV6-1A0A0B4J1U7 121 aa2.59□□□□□ -1.99
CCDC58-204ENST00000479414 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.59□□□□□ -1.99
CCDC58-204ENST00000479414 LCA5LO95447 670 aa2.59□□□□□ -1.99
CCDC58-204ENST00000479414 GFAPP14136 432 aa2.59□□□□□ -1.99
CCDC58-204ENST00000479414 SRMP19623 302 aa2.59□□□□□ -1.99
CCDC58-204ENST00000479414 BCAP31P51572 246 aa2.59□□□□□ -1.99
CCDC58-204ENST00000479414 PSMD4P55036 377 aaKnown RBP2.59□□□□□ -1.99
CCDC58-204ENST00000479414 DOC2AQ14183 400 aa2.59□□□□□ -1.99
CCDC58-204ENST00000479414 KLHL40Q2TBA0 621 aa2.59□□□□□ -1.99
CCDC58-204ENST00000479414 TPRG1LQ5T0D9 272 aa2.59□□□□□ -1.99
CCDC58-204ENST00000479414 MLIPQ5VWP3 458 aa2.59□□□□□ -1.99
CCDC58-204ENST00000479414 MFSD14CQ5VZR4 134 aa2.59□□□□□ -1.99
CCDC58-204ENST00000479414 CASP12Q6UXS9 341 aa2.59□□□□□ -1.99
CCDC58-204ENST00000479414 OR4M2Q8NGB6 313 aa2.59□□□□□ -1.99
CCDC58-204ENST00000479414 TCP10LQ8TDR4 215 aa2.59□□□□□ -1.99
CCDC58-204ENST00000479414 TFGQ92734 400 aaPredicted RBP2.59□□□□□ -1.99
CCDC58-204ENST00000479414 ALS2CR12Q96Q35 445 aa2.59□□□□□ -1.99
CCDC58-204ENST00000479414 FRMD8P1Q9BZ68 369 aaPredicted RBP2.59□□□□□ -1.99
CCDC58-204ENST00000479414 PEF1Q9UBV8 284 aaKnown RBP2.59□□□□□ -1.99
CCDC58-204ENST00000479414 KLF12Q9Y4X4 402 aa2.59□□□□□ -1.99
CCDC58-204ENST00000479414 ADGRL1O94910 1474 aa2.58□□□□□ -2
CCDC58-204ENST00000479414 CLDN34H7C241 214 aa2.58□□□□□ -2
CCDC58-204ENST00000479414 MFNGO00587 321 aa2.58□□□□□ -2
CCDC58-204ENST00000479414 OR7C2O60412 319 aa2.58□□□□□ -2
CCDC58-204ENST00000479414 SMC2O95347 1197 aa2.58□□□□□ -2
CCDC58-204ENST00000479414 PCK1P35558 622 aa2.58□□□□□ -2
CCDC58-204ENST00000479414 CCT6AP40227 531 aaKnown RBP2.58□□□□□ -2
CCDC58-204ENST00000479414 RPL18AQ02543 176 aaKnown RBP2.58□□□□□ -2
CCDC58-204ENST00000479414 MAD2L1BPQ15013 274 aaPredicted RBP2.58□□□□□ -2
CCDC58-204ENST00000479414 HADHQ16836 314 aaKnown RBP2.58□□□□□ -2
CCDC58-204ENST00000479414 ULK3Q6PHR2 472 aa2.58□□□□□ -2
CCDC58-204ENST00000479414 BBS7Q8IWZ6 715 aa2.58□□□□□ -2
CCDC58-204ENST00000479414 ADA2Q9NZK5 511 aa2.58□□□□□ -2
CCDC58-204ENST00000479414 RWDD2AQ9UIY3 292 aa2.58□□□□□ -2
CCDC58-204ENST00000479414 PEX19P40855 299 aa2.57□□□□□ -2
CCDC58-204ENST00000479414 IDH2P48735 452 aaKnown RBP2.57□□□□□ -2
CCDC58-204ENST00000479414 PPP1CAP62136 330 aa2.57□□□□□ -2
CCDC58-204ENST00000479414 KDSRQ06136 332 aa2.57□□□□□ -2
CCDC58-204ENST00000479414 ASCL4Q6XD76 172 aa2.57□□□□□ -2
CCDC58-204ENST00000479414 DAZ4Q86SG3 579 aaKnown RBP2.57□□□□□ -2
CCDC58-204ENST00000479414 ORMDL3Q8N138 153 aa2.57□□□□□ -2
CCDC58-204ENST00000479414 C1orf64Q8NEQ6 169 aa2.57□□□□□ -2
CCDC58-204ENST00000479414 TMEM234Q8WY98 164 aa2.57□□□□□ -2
CCDC58-204ENST00000479414 TOP1MTQ969P6 601 aa2.57□□□□□ -2
CCDC58-204ENST00000479414 SMARCD1Q96GM5 515 aa2.57□□□□□ -2
CCDC58-204ENST00000479414 NAPGQ99747 312 aaPredicted RBP2.57□□□□□ -2
CCDC58-204ENST00000479414 SHANK2-AS3Q9BTD1 123 aa2.57□□□□□ -2
CCDC58-204ENST00000479414 MS4A8Q9BY19 250 aa2.57□□□□□ -2
CCDC58-204ENST00000479414 FBXO44Q9H4M3 255 aa2.57□□□□□ -2
CCDC58-204ENST00000479414 NCOR1P1Q9H4R4 102 aa2.57□□□□□ -2
CCDC58-204ENST00000479414 RGCCQ9H4X1 137 aa2.57□□□□□ -2
CCDC58-204ENST00000479414 DAZ1Q9NQZ3 744 aaKnown RBP2.57□□□□□ -2
CCDC58-204ENST00000479414 NEURL4Q96JN8 1562 aa2.57□□□□□ -2
CCDC58-204ENST00000479414 TMEM131Q92545 1883 aa2.56□□□□□ -2
CCDC58-204ENST00000479414 PRAMEF26H0Y7S4 382 aa2.56□□□□□ -2
CCDC58-204ENST00000479414 PTHP01270 115 aa2.56□□□□□ -2
CCDC58-204ENST00000479414 GCGP01275 180 aa2.56□□□□□ -2
CCDC58-204ENST00000479414 MMP7P09237 267 aaPredicted RBP2.56□□□□□ -2
CCDC58-204ENST00000479414 PAX6P26367 422 aa2.56□□□□□ -2
CCDC58-204ENST00000479414 YWHAEP62258 255 aaKnown RBP2.56□□□□□ -2
CCDC58-204ENST00000479414 ZNF678Q5SXM1 525 aa2.56□□□□□ -2
CCDC58-204ENST00000479414 EPGNQ6UW88 154 aa2.56□□□□□ -2
CCDC58-204ENST00000479414 FAM131AQ6UXB0 335 aa2.56□□□□□ -2
CCDC58-204ENST00000479414 CYB561A3Q8NBI2 242 aa2.56□□□□□ -2
CCDC58-204ENST00000479414 TMEM104Q8NE00 496 aa2.56□□□□□ -2
CCDC58-204ENST00000479414 CHID1Q9BWS9 393 aa2.56□□□□□ -2
CCDC58-204ENST00000479414 CLSTN2Q9H4D0 955 aa2.56□□□□□ -2
CCDC58-204ENST00000479414 KPTNQ9Y664 436 aa2.56□□□□□ -2
CCDC58-204ENST00000479414 NID2Q14112 1375 aa2.56□□□□□ -2
CCDC58-204ENST00000479414 ISPDA4D126 451 aa2.55□□□□□ -2
CCDC58-204ENST00000479414 CENPBD1B2RD01 187 aa2.55□□□□□ -2
CCDC58-204ENST00000479414 DFFAO00273 331 aa2.55□□□□□ -2
CCDC58-204ENST00000479414 TTC4O95801 387 aa2.55□□□□□ -2
CCDC58-204ENST00000479414 COL5A1P20908 1838 aaPredicted RBP2.55□□□□□ -2
CCDC58-204ENST00000479414 TAS2R39P59534 338 aa2.55□□□□□ -2
CCDC58-204ENST00000479414 RPS11P62280 158 aaKnown RBP eCLIP2.55□□□□□ -2
CCDC58-204ENST00000479414 GRB2P62993 217 aaKnown RBP2.55□□□□□ -2
CCDC58-204ENST00000479414 SLC35A1P78382 337 aa2.55□□□□□ -2
CCDC58-204ENST00000479414 FLI1Q01543 452 aaPredicted RBP2.55□□□□□ -2
CCDC58-204ENST00000479414 BRD3OSQ6XYD6 125 aa2.55□□□□□ -2
CCDC58-204ENST00000479414 OR2W3Q7Z3T1 314 aa2.55□□□□□ -2
CCDC58-204ENST00000479414 OR2M7Q8NG81 312 aa2.55□□□□□ -2
CCDC58-204ENST00000479414 OR52N1Q8NH53 320 aa2.55□□□□□ -2
CCDC58-204ENST00000479414 Q96MT0 163 aa2.55□□□□□ -2
CCDC58-204ENST00000479414 IL22Q9GZX6 179 aa2.55□□□□□ -2
CCDC58-204ENST00000479414 CHRAC1Q9NRG0 131 aa2.55□□□□□ -2
CCDC58-204ENST00000479414 ZNF229Q9UJW7 825 aa2.55□□□□□ -2
CCDC58-204ENST00000479414 ZNF407Q9C0G0 2248 aa2.54□□□□□ -2
CCDC58-204ENST00000479414 IGKV3D-11A0A0A0MRZ8 115 aa2.54□□□□□ -2
CCDC58-204ENST00000479414 TRAV8-6A0A0B4J262 113 aa2.54□□□□□ -2
CCDC58-204ENST00000479414 A0A1W2PNN7 141 aa2.54□□□□□ -2
CCDC58-204ENST00000479414 CD34P28906 385 aa2.54□□□□□ -2
CCDC58-204ENST00000479414 ARL2P36404 184 aa2.54□□□□□ -2
CCDC58-204ENST00000479414 MPV17P39210 176 aa2.54□□□□□ -2
CCDC58-204ENST00000479414 GALR1P47211 349 aa2.54□□□□□ -2
CCDC58-204ENST00000479414 HCCSP53701 268 aa2.54□□□□□ -2
CCDC58-204ENST00000479414 BTN1A1Q13410 526 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms