RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 EIF1P41567 113 aaKnown RBP9.46□□□□□ -0.89
VPS52-217ENST00000478934 S100A10P60903 97 aa9.46□□□□□ -0.89
VPS52-217ENST00000478934 ZNF345Q14585 488 aa9.46□□□□□ -0.89
VPS52-217ENST00000478934 PDCD1Q15116 288 aa9.46□□□□□ -0.89
VPS52-217ENST00000478934 KCNMB1Q16558 191 aa9.46□□□□□ -0.89
VPS52-217ENST00000478934 NKAPLQ5M9Q1 402 aa9.46□□□□□ -0.89
VPS52-217ENST00000478934 CLEC9AQ6UXN8 241 aa9.46□□□□□ -0.89
VPS52-217ENST00000478934 PGAP1Q75T13 922 aa9.46□□□□□ -0.89
VPS52-217ENST00000478934 CBLN2Q8IUK8 224 aa9.46□□□□□ -0.89
VPS52-217ENST00000478934 TMEM123Q8N131 208 aa9.46□□□□□ -0.89
VPS52-217ENST00000478934 DYRK2Q92630 601 aa9.46□□□□□ -0.89
VPS52-217ENST00000478934 RTBDNQ9BSG5 229 aaPredicted RBP9.46□□□□□ -0.89
VPS52-217ENST00000478934 NKX6-2Q9C056 277 aaPredicted RBP9.46□□□□□ -0.89
VPS52-217ENST00000478934 OR10A2Q9H208 303 aa9.46□□□□□ -0.89
VPS52-217ENST00000478934 METTL8Q9H825 291 aaKnown RBP9.46□□□□□ -0.89
VPS52-217ENST00000478934 ZNF701Q9NV72 531 aaPredicted RBP9.46□□□□□ -0.89
VPS52-217ENST00000478934 PISDQ9UG56 409 aa9.46□□□□□ -0.89
VPS52-217ENST00000478934 LOC102723996A0A087X1L8 192 aa9.46□□□□□ -0.9
VPS52-217ENST00000478934 DHHO43323 396 aa9.46□□□□□ -0.9
VPS52-217ENST00000478934 SPRY1O43609 319 aaPredicted RBP9.46□□□□□ -0.9
VPS52-217ENST00000478934 KLK3P07288 261 aaPredicted RBP9.46□□□□□ -0.9
VPS52-217ENST00000478934 CHRM2P08172 466 aa9.46□□□□□ -0.9
VPS52-217ENST00000478934 SSR4P51571 173 aa9.46□□□□□ -0.9
VPS52-217ENST00000478934 SNU13P55769 128 aaKnown RBP9.46□□□□□ -0.9
VPS52-217ENST00000478934 CHAF1BQ13112 559 aa9.46□□□□□ -0.9
VPS52-217ENST00000478934 AADACL3Q5VUY0 350 aa9.46□□□□□ -0.9
VPS52-217ENST00000478934 LPCAT3Q6P1A2 487 aa9.46□□□□□ -0.9
VPS52-217ENST00000478934 RPS19BP1Q86WX3 136 aaKnown RBP9.46□□□□□ -0.9
VPS52-217ENST00000478934 EIF4E3Q8N5X7 224 aaKnown RBP9.46□□□□□ -0.9
VPS52-217ENST00000478934 SLC25A43Q8WUT9 341 aaPredicted RBP9.46□□□□□ -0.9
VPS52-217ENST00000478934 PIK3IP1Q96FE7 263 aa9.46□□□□□ -0.9
VPS52-217ENST00000478934 NELFAQ9H3P2 528 aa9.46□□□□□ -0.9
VPS52-217ENST00000478934 MOB1AQ9H8S9 216 aa9.46□□□□□ -0.9
VPS52-217ENST00000478934 EHFQ9NZC4 300 aa9.46□□□□□ -0.9
VPS52-217ENST00000478934 MCTS1Q9ULC4 181 aaKnown RBP9.46□□□□□ -0.9
VPS52-217ENST00000478934 GPR132Q9UNW8 380 aa9.46□□□□□ -0.9
VPS52-217ENST00000478934 FAM96BQ9Y3D0 163 aa9.46□□□□□ -0.9
VPS52-217ENST00000478934 LOC400499M0QZD8 3231 aa9.46□□□□□ -0.9
VPS52-217ENST00000478934 FAM186AA6NE01 2351 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 DBX1A6NMT0 343 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 TLX3O43711 291 aaPredicted RBP9.45□□□□□ -0.9
VPS52-217ENST00000478934 SFTPBP07988 381 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 RCC1P18754 421 aaPredicted RBP9.45□□□□□ -0.9
VPS52-217ENST00000478934 ADH6P28332 368 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 GUCA1AP43080 201 aaPredicted RBP9.45□□□□□ -0.9
VPS52-217ENST00000478934 ID4P47928 161 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 RRADP55042 308 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 CSNK2A1P68400 391 aaPredicted RBP9.45□□□□□ -0.9
VPS52-217ENST00000478934 SRSF4Q08170 494 aaKnown RBP9.45□□□□□ -0.9
VPS52-217ENST00000478934 Q0VFX4 171 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 RAB32Q13637 225 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 ZNF774Q6NX45 483 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 PUSL1Q8N0Z8 303 aaKnown RBP9.45□□□□□ -0.9
VPS52-217ENST00000478934 CSNK2A3Q8NEV1 391 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 OR5H2Q8NGV7 314 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 FGFBP3Q8TAT2 258 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 TMEM54Q969K7 222 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 MARC2Q969Z3 335 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 SGK3Q96BR1 496 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 ALKBH3Q96Q83 286 aaPredicted RBP9.45□□□□□ -0.9
VPS52-217ENST00000478934 TSNAXQ99598 290 aaKnown RBP9.45□□□□□ -0.9
VPS52-217ENST00000478934 ANGPTL4Q9BY76 406 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 PARP12Q9H0J9 701 aaKnown RBP9.45□□□□□ -0.9
VPS52-217ENST00000478934 PRO3102Q9H379 93 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 FBLN5Q9UBX5 448 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 CCDC187A0A096LP49 1063 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 M0R135 149 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 AGPAT2O15120 278 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 SNAPC5O75971 98 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 IGHV3-9P01782 118 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 MPZP25189 248 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 OTX2P32243 289 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 OR3A2P47893 321 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 SUCLG1P53597 346 aaKnown RBP9.45□□□□□ -0.9
VPS52-217ENST00000478934 GRB2P62993 217 aaKnown RBP9.45□□□□□ -0.9
VPS52-217ENST00000478934 TMEM128Q5BJH2 165 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 GJC3Q8NFK1 279 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 AKR7LQ8NHP1 331 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 ZNF799Q96GE5 643 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 CDX2Q99626 313 aaPredicted RBP9.45□□□□□ -0.9
VPS52-217ENST00000478934 PIGQQ9BRB3 760 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 PECRQ9BY49 303 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 ULBP2Q9BZM5 246 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 ZNF700Q9H0M5 742 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 HPF1Q9NWY4 346 aa9.45□□□□□ -0.9
VPS52-217ENST00000478934 NSG1A0A0A6YYJ2 146 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 FAM230AA0A1W2PPH8 454 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 FAM221AA4D161 298 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 DHRS7CA6NNS2 312 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 GSTP1P09211 210 aaKnown RBP9.44□□□□□ -0.9
VPS52-217ENST00000478934 B4GALT1P15291 398 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 RFC3P40938 356 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 AIMP2Q13155 320 aaKnown RBP9.44□□□□□ -0.9
VPS52-217ENST00000478934 TCEAL6Q6IPX3 200 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 ZNF585AQ6P3V2 769 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 FAM122CQ6P4D5 195 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 OPN5Q6U736 354 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 TMEM17Q86X19 198 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 AGBL5Q8NDL9 886 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 OR56B1Q8NGI3 324 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms